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Properties
| Property Name | Value |
|---|
| Product | phosphatidate cytidylyltransferase |
| Orig transcript id | gnl|cribi|Naga_100008g58.7869.mrna |
| Orig protein id | gnl|cribi|Naga_100008g58.7869 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:963983..967679 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2687 ID=rna2687|Name=rna2687|organism=Nannochloropsis gaditana|type=mRNA|length=1041bp
ATGCCTTTTCAGGTTATCAACAGTAGAAATGCAGTGCTTCTACGTAAAGA
GCTGGAGGCACTGGCCACGGCGCATGCACCGCAGGGCAGCGAGCCTTTAG
ATAGCATGCGGTACGTGCTCGGTACCGCCCTTTCAGCTTATGCTACCGAA
AAAGTACGACATGTGATGCTCAGAGATGCTAAAATACCGGGAAGCATCTT
CCAAATGGATCATACATCTCCACAAGGCAGTAAATTGGTTGGAGAAGGGG
CCCGTCTCAGCCGAATTCTCCAAGTCACGGACCTTAGTGACGTCCGGCTT
CTAAACGGACTATCTGTAATCGATGCGACAGTGCTATTGGGAGAGACGTT
GAGACTGCATTTTGCTTTTCGTCGCGAGCCTATGCGTCAAGGGACTTCAC
TGCCTCGAATGAGGTCTTCCATTTCCATGGACGAGGACAACAGGGAAGTA
GCACCAGACATGCAGGGAGGCCCACGAAGACAGAGAAGGAGGGCCAAAGA
CGATAATGGGAGACCCGATAACCGCAGGCAGAGAACAACACCGGCATCCA
CGACCATATCATGGCCGGATCCTGAGCCAACCACAATCGTGAACTACGAA
ATTAGTGCCAGCAATGGCCCCGCAGAGCCTTTTCATGTCCTACTCCAAGC
AACGATTTGCGGCTTCCACCCTACCGGCTTGCCCAGCCCTGCGGGCGTCC
ACGCTCCGCCCGAGGAAATGGATTGCTTAGGCACAAATAGCAACAAGGAT
TTGGAACCGGCAGATGTGTGCGTCGCGGAGATGGACGAAGATGCTTTGGA
AGCGGCTATTGCGGAGTGTGGCACGCCCTTCTCCCTGGGCGAATTCGTCT
CCTTCTTGCTTCTCTTGCCTTACCACGAGGAGGAATGGGATGTGTGCAAT
CTAGTCATGGATCAACTATTCGACCAAGACGATGAAAGCAGCAAAAGTGG
CTCCGTCCTCTCTTCTCTCGCCTTGTCCCCCTACGAAAAGAGAAAGTCTG
AGGATGCCACAGGGAGAAGCGGGAAAAAAGTAAAAACGTAA back to topprotein sequence of rna2687 >rna2687-protein ID=rna2687-protein|Name=rna2687|organism=Nannochloropsis gaditana|type=polypeptide|length=480bp
MPAETRGQRRRGVGRGAKSGSGEDEARHASRSATKDGYTGGVRGASADES
SAIGSSSQNNDTTLGANGHAHHHSPHHVSTASARERTRSKIVTRVTFAIV
LLAVFFGIAWAGHVYIFLLVCGIQVMLFKELVAVRYRAAMEKKTPLFRTL
QWSWFVAAMFYAHGDSIVKLLREDSLLGINDDDQPEKSLIYSSFALFSTL
FVVTVLTLRPGLYKYQVGQLAWTVVILLLIVGQLKVVAPNIFSGIFWYFF
PASCIIVNDIMAYVCGMSMGRRFIKRPFLRLSPNKTWEGFIGAFFFTLLW
AFWFSRFLARFPYFTCSFKQLRPSEEFTWQELRPGTTFHQAMLRANTVQP
DRVFTQTTVVLPAALAHLLGRASLPVKPIQMHGLVIGIFGSLVAPFGGFL
MSAIKRAYGIKDFDSLIPGHGGVTDRMDCQLVMILYTFVHYQTFIRHVPI
NYHRVWASVSALKRDDQVRIWEELGKYLER back to topmRNA from alignment at CM002459.1:963983..967679+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2687 ID=rna2687|Name=rna2687|organism=Nannochloropsis gaditana|type=mRNA|length=3697bp|location=Sequence derived from alignment at CM002459.1:963983..967679+ (Nannochloropsis gaditana)
GTACTCGCAATCAAGTATGGCTGGCCTCGACTCTCCAGTATTTCTTAGTA
TATCGGGTACGTGGCTCTTTGACTTGTACCCTGAAGATGTCGCGTCCAAG
CTTACTGCCTCACACGCAATACAAATTGCCCATGGAGTTGAATCACACTT
TTAAAATTAATCCAGCCCACCGGTAGACTTAAACAACACCGCGTAAGACA
TCCGGAAAGCGATGAGCAGAAGGCGAGCAACGCCATAACTTGAACCCGCC
GTTGCCATGGGGGAGACGGGTAGAACCCCCGAAAAGACGTCATTCCAGTa
gatcacgtcctccttacAATCAAGCGGGAGATTCTTTCGCCTAACAATCG
ACCTTCAAGCGTGTGAGAGCAATATATTAAACAAAAAAATAGCAGGCAAG
CGTTTACGCCCCAAACTTGGCGAGCACAAGGATGTTAAACCGAACAAGAC
ATGAATACATGAGATACTTGCGATTGTAACGTAAATGCACCGCTACGACG
ATTCCGCAAATTATTTGTCATGCTCTTGCTCCTTCGTCACTTCATGCTGA
TGCTCGTCCTGCCTTAGCAGCCTCTTTCAGTATAGCCTCGTGCGACGATA
GCCGTGCCTCCAAATATGCATGCCGAGCCTCCATACTGGTCGCCCTCTTT
TCCGCCTCAGAGACACGTTCTTCCAAGTCATTCAGCAACTCCGGCCGAGC
GGCCAACATGAAGGCTTTCCCAACGGAGCGAAACAAACGCGTATCATCCC
CGACTTTGCTCAGCTCTGCCAAAGTCAACTCGGTACGTCGTTTCTCCCCC
GTAGCTGCTACTCCCTTTGCTCGCACTTCTTTAAGCTCTTTATTGGCTGC
GATGTATTGCTCCTGAATCTCCGCGAGCTCCTCTCCTGACATACCTCGCC
CTGCCGCGCCAGTGCTGTCAGCATTTCGCACGAATTCAGCCGCCTTTTTC
TTAGCGTTGACCAGTTGCAACTGTTTTCGCATCTCCGCATTATCCGGCTG
TCGCTTCAGACATGCCTTAATGGTCTCTAGGGCGCCATCAAAATCTTCCT
GCTCCATTTGAGCCAGAGTGAGGCGGTAATAGCCTTTCAGAAAAGCGGGG
TCCTTTTCTATGCAAGTTTTGGCGTCTGCCGCAGCCAAggcccactccct
cttcgcccaaTGGCACGCACTGCGATTGGAATAGTAGACATGACTTTCGG
GGTCGAGCTCAATCGCTTCGCTGTACTTAGCTATTGCTTCATCATATTTT
TTGGCTGCGAAAGCCGTGTTTCCCAGCCTGGCGAACATGTTACAGAAGAA
CGTATTTGTCAAAAGGCCGCGACTCGAAATAGAAAAGGGCAGATCAAATA
CAGTGCAAGGTGTTTCATGGACAACACAtactctttcttttcctgtgCAG
CCGCAACGTTCTCCGGAAgcactccctcttcttccttgctgCCTGTCTCC
ATCCCTGTCTCGTCGCTCATGTCTCCAACTAATTAGTCCACGGTTCCTGT
GAGTGCACCACGGGGGATAGAGCGCTTTGCCATGCGTGAGTTGAGAAACA
TGGTCGCAATGTTCTCAATGCAATGTCCTCAACAGAGGCGCAGTTCGCGT
TGGGTGACGATCTTGAGCGGTTTGCACATTATTAAGTGGTGTTGGTCAGC
GAAAGAACAacgatggagaggatcgATGCGACACCCCGGTCACAAAGATG
TTGCCCCCGTGACAACTTGGTTGCAACACCAGTAATGACACCATCTCCGC
ATAGCTctatcttccttttccttgaaTCACGCGTGTATTTTTATTCGATC
CCGCTGCAAAAGGTGAAGGGCGGCATTCTCGTCACTATGTTCTGCCTTGG
AAAGACACTCTTCCAAGCTTGCTCCCGGCATATTTCCCGTGTACATTTCC
GCGCACAAGCACTCTGAATTGAGAAATCCTCCATCCATCAATCACCAATA
AATACAGGCTGTATCATGCCTGCAGAGACCCGAGGACAGAGGAGGCGTGG
GGTCGGTAGAGGAGCCAAGTCTGGAAGTGGTGAGGACGAGGCCCGGCACG
CATCGAGAAGTGCTACCAAGGACGGGTACACCGGGGGAGTGAGAGGTGCC
TCGGCCGATGAGAGCAGTGCAATCGGTAGCAGCAGTCAAAACAATGACAC
TACTTTGGGCGCAAATGGCCATGCGCACCACCATTCACCGCACCACGTTT
CCACCGCCTCTGCAAGGGAGCGGACGCGGTCTAAAATTGTCACGCGCGTC
ACCTTCGCCATAGTCCTTCTCGCTGTCTTTTTCGGCATCGCCTGGGCAGG
CCATGTCTatattttccttcttgtctgCGGCATACAGGTTATGCTTttca
aggagctggtggccgTGCGGTACCGGGCAGCCATGGAGAAGAAAACCCCC
CTCTTTCGCACGTTGCAATGGAGCTGGTTTGTAGCGGCCATGTTTTACGC
GCACGGGGACTCCATCGTGAAGCTCTTGCGGGAAGACTCATTGTTGGGCA
TTAACGATGACGACCAACCGGAGAAGTCCCTTATCTACAGCTCCTTCGCG
CTtttctccaccctcttcgtcGTGACCGTCCTGACCCTCCGACCGGGCCT
CTACAAGTACCAAGTAGGACAGCTGGCGTGGACcgtggtcatcctcctcc
tcatcgtcggTCAGCTGAAAGTGGTCGCCCCCAACATCTTCAGCGGCATT
TTTTGGTAtttcttccctgcctcttgCATCATCGTCAACGACATCATGGC
CTACGTGTGCGGGATGAGCATGGGGAGGAGATTCATCAagcgtcccttcc
tccgcctctcgccCAACAAGACCTGGGAGGGCTTCATcggcgccttcttc
ttcacccTCCTGTGGGCCTTCTGGTTCTCCCGCTTCCTGGCCCGCTTCCC
TTACTTCACTTGCTCCTTCAAGCAGCTCCGGCCCTCGGAAGAGTTCACCT
GGCAGGAGCTTCGCCCGGGCACCACCTTCCACCAGGCCATGCTCCGCGCC
AACACCGTGCAGCCCGACCGGGTCTTCACGCAAACCAccgtcgtcctccc
ggcGGCCCTGGCCCATCTCCTGGgccgtgcctccctcccggtcaaGCCGA
TCCAGATGCATGGATTGGTGATCGGGATCTTCGGGTCGCTGGTGGCGCCT
TTCGGGGGCTTCCTCATGTCTGCTATCAAGCGGGCCTACGGCATCAAGGA
CTTCGACTCCTTGATCCCGGGGCACGGAGGGGTGACGGACCGGATGGACT
GCCAGCTTGTCATGATTCTCTACACGTTCGTCCACTACCAGACCTTCATC
CGGCACGTTCCAATCAACTACCACCGCGTATGGGCCTCGGTCTCGGCCTT
GAAGAGGGACGATCAGGTCAGGATCTGGGAGGAACTGGGGAAGTATCTGG
AAAGATAGTGCAAGggaggctgggggggggacgggagtGGTAGGGGCACG
GGCGCGTGCATTTATATAGACTGCTGTTGGGATAAAGCACTGTCGCGTAG
GTGGGAAGTcgttgggggggggatggtgACGGTACCGGAAAGGTCTGAGA
CATGGAAGGGTCGAATGCCGAGAGACCGGTGTTCCAGATGGGCAAGGGTT
TAAATATTGAATGCAAATGTAAAAGCAAAAGATTGCCAGAGGCTACAATG
TCCGTCCGTTTTCTTGAGCTGTCGCCCGCAAATTGTACTCTCCTTTA back to topCoding sequence (CDS) from alignment at CM002459.1:963983..967679+ >rna2687 ID=rna2687|Name=rna2687|organism=Nannochloropsis gaditana|type=CDS|length=1443bp|location=Sequence derived from alignment at CM002459.1:963983..967679+ (Nannochloropsis gaditana)
ATGCCTGCAGAGACCCGAGGACAGAGGAGGCGTGGGGTCGGTAGAGGAGC
CAAGTCTGGAAGTGGTGAGGACGAGGCCCGGCACGCATCGAGAAGTGCTA
CCAAGGACGGGTACACCGGGGGAGTGAGAGGTGCCTCGGCCGATGAGAGC
AGTGCAATCGGTAGCAGCAGTCAAAACAATGACACTACTTTGGGCGCAAA
TGGCCATGCGCACCACCATTCACCGCACCACGTTTCCACCGCCTCTGCAA
GGGAGCGGACGCGGTCTAAAATTGTCACGCGCGTCACCTTCGCCATAGTC
CTTCTCGCTGTCTTTTTCGGCATCGCCTGGGCAGGCCATGTCTatatttt
ccttcttgtctgCGGCATACAGGTTATGCTTttcaaggagctggtggccg
TGCGGTACCGGGCAGCCATGGAGAAGAAAACCCCCCTCTTTCGCACGTTG
CAATGGAGCTGGTTTGTAGCGGCCATGTTTTACGCGCACGGGGACTCCAT
CGTGAAGCTCTTGCGGGAAGACTCATTGTTGGGCATTAACGATGACGACC
AACCGGAGAAGTCCCTTATCTACAGCTCCTTCGCGCTtttctccaccctc
ttcgtcGTGACCGTCCTGACCCTCCGACCGGGCCTCTACAAGTACCAAGT
AGGACAGCTGGCGTGGACcgtggtcatcctcctcctcatcgtcggTCAGC
TGAAAGTGGTCGCCCCCAACATCTTCAGCGGCATTTTTTGGTAtttcttc
cctgcctcttgCATCATCGTCAACGACATCATGGCCTACGTGTGCGGGAT
GAGCATGGGGAGGAGATTCATCAagcgtcccttcctccgcctctcgccCA
ACAAGACCTGGGAGGGCTTCATcggcgccttcttcttcacccTCCTGTGG
GCCTTCTGGTTCTCCCGCTTCCTGGCCCGCTTCCCTTACTTCACTTGCTC
CTTCAAGCAGCTCCGGCCCTCGGAAGAGTTCACCTGGCAGGAGCTTCGCC
CGGGCACCACCTTCCACCAGGCCATGCTCCGCGCCAACACCGTGCAGCCC
GACCGGGTCTTCACGCAAACCAccgtcgtcctcccggcGGCCCTGGCCCA
TCTCCTGGgccgtgcctccctcccggtcaaGCCGATCCAGATGCATGGAT
TGGTGATCGGGATCTTCGGGTCGCTGGTGGCGCCTTTCGGGGGCTTCCTC
ATGTCTGCTATCAAGCGGGCCTACGGCATCAAGGACTTCGACTCCTTGAT
CCCGGGGCACGGAGGGGTGACGGACCGGATGGACTGCCAGCTTGTCATGA
TTCTCTACACGTTCGTCCACTACCAGACCTTCATCCGGCACGTTCCAATC
AACTACCACCGCGTATGGGCCTCGGTCTCGGCCTTGAAGAGGGACGATCA
GGTCAGGATCTGGGAGGAACTGGGGAAGTATCTGGAAAGATAG back to top
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