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Properties
| Property Name | Value |
|---|
| Product | and ph domain-containing protein 6 |
| Orig transcript id | gnl|cribi|Naga_100008g51.7924.mrna |
| Orig protein id | gnl|cribi|Naga_100008g51.7924 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:954317..955286 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2682 ID=rna2682|Name=rna2682|organism=Nannochloropsis gaditana|type=mRNA|length=1038bp
CTCCCTCTCGTTACCCTACGTTGCAGGCAACGTGCACGGCAATACACAAC
GTCCGGCTAAACCAGAAATCAAAATATTCTCCATAGGATGCAAAAGATCT
ATATTGTCACCCTTGGATTGAGTTTTGTCATTTCATCTGTCTCCATGGTG
GTCCCGGTGAAGAGCAAACGACCATCACCGCCTAGGCCTCAACCCCCCCC
TAGACCAGACAATGCTGTGGAACGTCTCCTAATCCGTGCAATGGCTACGA
AATTGGCAAGTATAACTCCACATGACGCTCCTCCGCCCCCTTCGTCCCCA
ACATACGAGGAGATGGCCCGCTCCACGATGCAGCTCTTGAACCCTGTATT
AGCACCGGATCCGCTCGTTCTGTCTGCCAGGATAGCGCGCTTACTCGACG
AAGCAACGCCGCCTTTCCTCCGATTTCTTTTCCAAAACTTCGGAGCTTCC
CGTGTGGGCTGCGAGGCGAACGCCCTTGTCGCGCCTTTCTTCTCCACGTG
GTTGGTGGGTCCCGCCCGTCGCGTCGAAGGTGAAGTGAACGGAGAGGCAT
GGCAATCCACCATGCTCATTGAGGAGTGCCGGTACCTGAAGGCGGTCGAC
GGATGTCGGCATGCATGCGTGTATTTGTGCAAAGTTCCCACGCAGACGTT
TTTCGAATCATCCCTGGGGGTGCCTGTGACGTTGACGCCAGATTTCACCG
ACAACAGCTGCCGCATGTGCTTCGGACAAGCCCCTCCGGCCCGACTGGCC
GACGACCCCGTCATGCAGGCTGGTGAGGGCGTCCCTTCTCTGGCGACCAC
GTCGTGTTGTGGGGTCGCGGTGGAGGAAAAAGGCAGCAGAAGCAAGGATG
GCCGTCCCCTGCGGACGGGGGGGGGAGGCGTCTACGACCAGCCGGCCTCT
CGTCAGGAGAACGTCTAATTATCCGGGGTACGGATGATCACATGTACATC
GACTGTAAACGACGACCGCGACACAGCCCGTGGGTCCATTGCATGCAATT
GCTAAAGTAATGAAGAGGATGCCCATGCCCTCTCACCC back to topprotein sequence of rna2682 >rna2682-protein ID=rna2682-protein|Name=rna2682|organism=Nannochloropsis gaditana|type=polypeptide|length=239bp
MTQISFDFAFGTIFSGISTVHFTIIVAHAMSASSVSADAGPTSGSQGNRG
SQTSPTRPSRLSQRRWARNNKSYWSADEEVTACMLYNRSLMVTFRKHHCR
ACGKVICQHCSSYVGSEHNTRRRITEKFSIALKLLRAAAPPPASIRVCPP
CADSISRLAVIQATPLEEKKLEDAVKDTPVCVYALYPRTEELYIGSLSVV
CIQARDRAGRNGQGLTNPYVAGTLTGYTLSRGQEWPKTM back to topmRNA from alignment at CM002459.1:954317..955286+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2682 ID=rna2682|Name=rna2682|organism=Nannochloropsis gaditana|type=mRNA|length=970bp|location=Sequence derived from alignment at CM002459.1:954317..955286+ (Nannochloropsis gaditana)
ATGACACAGATCTCCTTCGACTTTGCCTTTGGCACCATCTTCTCAGGGAT
ATCGACGGTACATTTCACCATTATCGTAGCACACGCCATGAGCgcttcct
ctgtctccgcGGATGCCGGACCTACGTCCGGGTCACAAGGTAATATACAC
TtcaagggggtggggaggtaaaCTAGCAGGAGGATCCCGGAACGTTTTTG
GGGCGGTCGCGCTCCCGTGTCCACATGATACTGTGTTCAAGTGTTTTGTT
TCTCGTGAAGAAAAGTTTACGTCAGGAGCAAAAGTGACGCGTTCAGGCCC
ATGTTTCCTACTCTACGTGCCTTCCATATTCTGACCAGGAAACCGCGGGT
CTCAGACCTCCCCTACACGGCCGTCGCGGCTTTCGCAGCGTCGTTGGGCC
CGGAACAACAAAAGTTATTGGTCGGCAGACGAAGAGGTGACGGCATGCAT
GCTTTACAACAGATCTTTGATGGTGACTTTCCGGAAACATCATTGCCGAG
CATGTGGAAAAGTCATCTGTCAACATTGCTCTAGCTATGTGGGGTCCGAG
CATGTATTCGAGGACTTTACCGTTAGAGAAAATCCATCTTACATCTTAGC
ATAGAATACGCGTCGAAGGATAACCGAAAAGTTCTCGATAGCGCTGAAAT
TGTTGCGGGCggctgccccgcccccagcAAGCATTCGAGTATGTCCACCG
TGCGCCGACTCTATCAGTCGGCTTGCGGTTATCCAGGCCACACCTctgga
agaaaagaagctAGAAGATGCCGTAAAAGATACGCCAGTCTGTGTCTACG
CTCTGTATCCCCGAACTGAGGAGCTCTACATCGGAAGCCTTTCTGTGGTG
TGTATTCAAGCCCGGGATCGGGCAGGCCGTAATGGTCAAGGCCTCACAAA
CCCCTACGTGGCTGGGACGCTGACTGGATACACGTTGTCACGGGGGCAGG
AATGGCCCAAGACAATGTGA back to topCoding sequence (CDS) from alignment at CM002459.1:954317..955286+ >rna2682 ID=rna2682|Name=rna2682|organism=Nannochloropsis gaditana|type=CDS|length=2160bp|location=Sequence derived from alignment at CM002459.1:954317..955286+ (Nannochloropsis gaditana)
ATGACACAGATCTCCTTCGACTTTGCCTTTGGCACCATCTTCTCAGGGAT
ATCGACGGTACATTTCACCATTATCGTAGCACACGCCATGAGCgcttcct
ctgtctccgcGGATGCCGGACCTACGTCCGGGTCACAAGGAAACCGCGGG
TCTCAGACCTCCCCTACACGGCCGTCGCGGCTTTCGCAGCGTCGTTGGGC
CCGGAACAACAAAAGTTATTGGTCGGCAGACGAAGAGGTGACGGCATGCA
TGCTTTACAACAGATCTTTGATGGTGACTTTCCGGAAACATCATTGCCGA
GCATGTGGAAAAGTCATCTGTCAACATTGCTCTAGCTATGTGGGGTCCGA
GCATAATACGCGTCGAAGGATAACCGAAAAGTTCTCGATAGCGCTGAAAT
TGTTGCGGGCggctgccccgcccccagcAAGCATTCGAGTATGTCCACCG
TGCGCCGACTCTATCAGTCGGCTTGCGGTTATCCAGGCCACACCTctgga
agaaaagaagctAGAAGATGCCGTAAAAGATACGCCAGTCTGTGTCTACG
CTCTGTATCCCCGAACTGAGGAGCTCTACATCGGAAGCCTTTCTGTGGTG
TGTATTCAAGCCCGGGATCGGGCAGGCCGTAATGGTCAAGGCCTCACAAA
CCCCTACGTGGCTGGGACGCTGACTGGATACACGTTGTCACGGGGGCAGG
AATGGCCCAAGACAATGTGAATGACACAGATCTCCTTCGACTTTGCCTTT
GGCACCATCTTCTCAGGGATATCGACGGTACATTTCACCATTATCGTAGC
ACACGCCATGAGCgcttcctctgtctccgcGGATGCCGGACCTACGTCCG
GGTCACAAGGAAACCGCGGGTCTCAGACCTCCCCTACACGGCCGTCGCGG
CTTTCGCAGCGTCGTTGGGCCCGGAACAACAAAAGTTATTGGTCGGCAGA
CGAAGAGGTGACGGCATGCATGCTTTACAACAGATCTTTGATGGTGACTT
TCCGGAAACATCATTGCCGAGCATGTGGAAAAGTCATCTGTCAACATTGC
TCTAGCTATGTGGGGTCCGAGCATAATACGCGTCGAAGGATAACCGAAAA
GTTCTCGATAGCGCTGAAATTGTTGCGGGCggctgccccgcccccagcAA
GCATTCGAGTATGTCCACCGTGCGCCGACTCTATCAGTCGGCTTGCGGTT
ATCCAGGCCACACCTctggaagaaaagaagctAGAAGATGCCGTAAAAGA
TACGCCAGTCTGTGTCTACGCTCTGTATCCCCGAACTGAGGAGCTCTACA
TCGGAAGCCTTTCTGTGGTGTGTATTCAAGCCCGGGATCGGGCAGGCCGT
AATGGTCAAGGCCTCACAAACCCCTACGTGGCTGGGACGCTGACTGGATA
CACGTTGTCACGGGGGCAGGAATGGCCCAAGACAATGTGAATGACACAGA
TCTCCTTCGACTTTGCCTTTGGCACCATCTTCTCAGGGATATCGACGGTA
CATTTCACCATTATCGTAGCACACGCCATGAGCgcttcctctgtctccgc
GGATGCCGGACCTACGTCCGGGTCACAAGGAAACCGCGGGTCTCAGACCT
CCCCTACACGGCCGTCGCGGCTTTCGCAGCGTCGTTGGGCCCGGAACAAC
AAAAGTTATTGGTCGGCAGACGAAGAGGTGACGGCATGCATGCTTTACAA
CAGATCTTTGATGGTGACTTTCCGGAAACATCATTGCCGAGCATGTGGAA
AAGTCATCTGTCAACATTGCTCTAGCTATGTGGGGTCCGAGCATAATACG
CGTCGAAGGATAACCGAAAAGTTCTCGATAGCGCTGAAATTGTTGCGGGC
ggctgccccgcccccagcAAGCATTCGAGTATGTCCACCGTGCGCCGACT
CTATCAGTCGGCTTGCGGTTATCCAGGCCACACCTctggaagaaaagaag
ctAGAAGATGCCGTAAAAGATACGCCAGTCTGTGTCTACGCTCTGTATCC
CCGAACTGAGGAGCTCTACATCGGAAGCCTTTCTGTGGTGTGTATTCAAG
CCCGGGATCGGGCAGGCCGTAATGGTCAAGGCCTCACAAACCCCTACGTG
GCTGGGACGCTGACTGGATACACGTTGTCACGGGGGCAGGAATGGCCCAA
GACAATGTGA back to top
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