EWM27946.1, cds2657 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|585110287|gb|EWM27946.1| (peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 731.48 bits (1887), Expect = 0.000e+0 Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0 Query: 1 MKQNISTTARVLCVFFATIDIVECFHAISSGSAAKSIGNIVLHSSASSTPSFSSASPTSASSLFSPPSSQSSSSSSSSFSSSVASSSSFAQSDRRQALASLTSSIAIATCAAVITYTPLSPSNAATKNAKRLPYPAEITAKAFFDVRITGFVTGEEKATSEDFVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSLNDERAVNRQGSFLKRVEVLNVGLL 362 MKQNISTTARVLCVFFATIDIVECFHAISSGSAAKSIGNIVLHSSASSTPSFSSASPTSASSLFSPPSSQSSSSSSSSFSSSVASSSSFAQSDRRQALASLTSSIAIATCAAVITYTPLSPSNAATKNAKRLPYPAEITAKAFFDVRITGFVTGEEKATSEDFVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSLNDERAVNRQGSFLKRVEVLNVGLL Sbjct: 1 MKQNISTTARVLCVFFATIDIVECFHAISSGSAAKSIGNIVLHSSASSTPSFSSASPTSASSLFSPPSSQSSSSSSSSFSSSVASSSSFAQSDRRQALASLTSSIAIATCAAVITYTPLSPSNAATKNAKRLPYPAEITAKAFFDVRITGFVTGEEKATSEDFVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSLNDERAVNRQGSFLKRVEVLNVGLL 362
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|299115779|emb|CBN74344.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 145.591 bits (366), Expect = 2.721e-38 Identity = 86/208 (41.35%), Postives = 119/208 (57.21%), Query Frame = 0 Query: 163 FVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQ-------LLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSL-NDERAVNRQGSFLKRVEVLNVGLL 362 F GR+VFG++GK +P F++Y +A PSYA LTK PGV +E G+I GL I I G E EYG + LL A D P HDRRGLLT+ P F +TLG P+LD G VFG LL+G++ L +EKVP+Y +S E+ + F Q + + + K++ DERAV+R GS ++RV++L+ G+L Sbjct: 16 FKGRLVFGVYGKESPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRP-----HDRRGLLTRDRLSRG--PEFGVTLGAAPSLD-GSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 215
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|551561236|ref|XP_005767488.1| (hypothetical protein EMIHUDRAFT_445677 [Emiliania huxleyi CCMP1516] >gi|551606385|ref|XP_005784548.1| hypothetical protein EMIHUDRAFT_434219 [Emiliania huxleyi CCMP1516] >gi|485617938|gb|EOD15059.1| hypothetical protein EMIHUDRAFT_445677 [Emiliania huxleyi CCMP1516] >gi|485637633|gb|EOD32119.1| hypothetical protein EMIHUDRAFT_434219 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 137.117 bits (344), Expect = 3.662e-34 Identity = 84/231 (36.36%), Postives = 125/231 (54.11%), Query Frame = 0 Query: 138 ITAKAFFDVRITGFVTGEEKATSEDFV-GRMVFGLFGKAAPIVVGEFIKYTKAPYG-----GNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSLNDERAVNRQGSFLKRVEVLNVGLL 362 +T + F D+R+ + + V GR+ F L+G AP V F + K G + PSY + T PGV ++ GRI GL+ E AG ++YEYG +L+ G+ E LKHDRRGL+T+ Q + P F +TLGP P LD+G ++ + + L +E +P T S E +++F QK LF S++K++ D RA +R G L+RVE++N GLL Sbjct: 67 VTDRGFIDLRVIRSFDVDSGVLEDAAVRGRVQFELYGNDAPKAVERFKGFVKGDIGQFRSSSDGPSYRTGAFTTLRPGVILQGGRINGLRLTEFAGAQQYEYGSRLVPLDGVVEVN-ELKHDRRGLITRR--QFSAGPEFGITLGPAPQLDSGWEVIGRLSQDSAGLLPLIEGLPYITGRSLEEPGSVADNVFNAQKSLFTSLSKTIGDSRAEDRTGQLLRRVEIVNCGLL 294
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|922865151|gb|KOO32267.1| (peptidyl-prolyl isomerase g [Chrysochromulina sp. CCMP291]) HSP 1 Score: 125.561 bits (314), Expect = 4.015e-30 Identity = 86/239 (35.98%), Postives = 128/239 (53.56%), Query Frame = 0 Query: 134 YPAEITAKAFFDVRITGFVTGEEKATSEDFV--GRMVFGLFGKAAPIVVGEFIKYTKAPYG-----GNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGIL---LEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSLNDERAVNRQGSFLKRVEVLNVGLL 362 + A++T F D+RI + + ED R+ FGLFG +AP V +F+ + G G P+Y+ + K PGV +E G+I GL++ + AG EYEY +LL + + E + L HDRRGLLT+S A+ P F +TL P P LD G V G L + L +E +P T +S + A N++FT Q++ F ++K++ D RA +R G L+RVE+ G L Sbjct: 35 FAAKVTTSCFLDLRI---IQSYQVEVLEDAATRARLTFGLFGDSAPKGVAKFLDFVDGTPGQFKASGGGPAYSGAQFEKLQPGVLLEGGKIAGLRQTKFAGQLEYEYLGRLLPLRPVLEASDVL-HDRRGLLTRSIF--AIGPEFGITLAPAPNLD-GTHEVIGQLEPNAANEALLTILEGLPYITGKSMEGEGTAANAVFTAQREFFTGLSKAVGDSRAEDRTGQLLRRVEITKCGRL 266
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|551666546|ref|XP_005836034.1| (hypothetical protein GUITHDRAFT_151599 [Guillardia theta CCMP2712] >gi|428180186|gb|EKX49054.1| hypothetical protein GUITHDRAFT_151599 [Guillardia theta CCMP2712]) HSP 1 Score: 124.02 bits (310), Expect = 1.105e-28 Identity = 78/230 (33.91%), Postives = 125/230 (54.35%), Query Frame = 0 Query: 136 AEITAKAFFDVRITGFVTGEEKATSEDFV--GRMVFGLFGKAAPIVVGEFIKYTKAPYGGNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSLNDERAVNR-QGSFLKRVEVLNVGLL 362 EIT+K + DVRI + K ED V GR+VFGL+GK +P+ V F+K+ A YG P+Y+ + G +E GRI GL ++AG +++ +++ + E T +L+HDR+ LL+ P F++TL P P LD ++ VFG ++ G+E + + K+P T +S + +S + Q++ F ++AK D R N G L+RVE+ GL+ Sbjct: 137 GEITSKVYLDVRI---IRDYSKEVLEDGVLRGRIVFGLYGKQSPMTVQHFLKFVTASYGEG-PAYSSGMFYRHEAGRWIEGGRINGLSTTQVAGQETFQWNGRVVPLVPILE-TNSLRHDRKLLLSHRKFNPG--PEFDITLSPTPELDASNT-VFGEVIAGEEYVQEIVKLPFVTGKSLDPEGSPADSWWKAQREFFRNVAKVSGDTRVTNTFPGKLLRRVEITKCGLV 358
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|397641574|gb|EJK74729.1| (hypothetical protein THAOC_03582 [Thalassiosira oceanica]) HSP 1 Score: 110.538 bits (275), Expect = 8.058e-24 Identity = 103/324 (31.79%), Postives = 155/324 (47.84%), Query Frame = 0 Query: 76 SSSFSSSVASSSSFAQSDRRQALASLTS--------SIAIATCAAVITYTPLSPSNAATKNAKRLPYPAEITAKAFFDVRI-----TGFVTGEEKATSED--FVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGN--FPSYA---FSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGM------DEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIY--------TYESAGEQP--EALNSLFTNQKKLFLSMAKSLNDERAVN-RQGSFLKRVEVLNVGLL 362 SS FS+ + + A D +A + + S A+AT A+ + PL + +AT + LP ++T K +FDVRI T +V + + +D F G++V GLFG+ P EF+ Y PY + FPSY+ F +L T G+ V G I GL IAG + EY ++L AK +E T + H R+GLLT + + P F +T + + D VFGI+LE L+ + +P+ T + G P +S+FT Q+++F AK+ D R G L+R+EV VGLL Sbjct: 52 SSEFSTRRNCARNLADYDENRASDVIVTVERRRFVESAALATLASSL---PLVNAASATGTPEDLP---KVTQKVYFDVRISRADGTFYVKPDNEVRPDDEPFYGQLVVGLFGEQVPNHCKEFVSYIDVPYQVDAPFPSYSRSKFQTLDSST-GLLV-GGTIPGLAVNVIAGGQVLEYSGRVLPAKLWLEDRSSNESTQKIPHARKGLLTHRNLD--LTPSFGITTRSDSTILDSDHTVFGIVLEDSGLLEKVVDLPVLTDGGTVSKTTDELGVSPGGSVASSVFTAQRRVFRDAAKTFGDTRLDKVYDGKLLRRIEVTKVGLL 365
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|545705032|ref|XP_005704837.1| (cyclophilin [Galdieria sulphuraria] >gi|452821285|gb|EME28317.1| cyclophilin [Galdieria sulphuraria]) HSP 1 Score: 102.449 bits (254), Expect = 2.106e-21 Identity = 75/253 (29.64%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 138 ITAKAFFDVRITGFVTGEEKATSEDFVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGN--------------------------FPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSL-NDERAVN-RQGSFLKRVEVLNVGLL 362 +T + +FD+ + +++GRMVF L+G+ AP V F+++ K + + F SY FS + +PG+ +E G+I L+ + T Y+ G L+ A E T +LKH RGLLT+ Q P F +TL P LD + VFG L +G E L+A+E +P+ + E + LF Q+ LFL++ + + +D+RA L+RV V++ G+L Sbjct: 53 VTNRVYFDI-----------SVGNEYLGRMVFDLYGRDAPETVSTFLQFLKGVHNKDRTKDLNLSDQKLVEEEEEDLIYSEEPFVSYDFSLFYRCSPGILLEGGKIPNLRLTSVGDTTFYDIGGALIAANPQVE-TNSLKHTERGLLTRKRLQ--FGPEFGITLAGHPELDVSHT-VFGKLEQGYEVLEAIESLPVLVDSNRREGKTLSSKLFDWQRNLFLTIGRDVFHDKRADEIYPNKLLRRVAVISSGML 290
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|1210512415|dbj|GAX28529.1| (hypothetical protein FisN_12Hh105 [Fistulifera solaris]) HSP 1 Score: 84.7297 bits (208), Expect = 9.289e-15 Identity = 86/321 (26.79%), Postives = 150/321 (46.73%), Query Frame = 0 Query: 67 PSSQSSSSSSSSFSSSVASSSSFAQSDRRQALASLTSSIAIATCAAVITYTPLSPSNAATKNAKRLPYPAEITAKAFFDVRITG-----FVTGEEKATSED--FVGRMVFGLFGKAAPIVVGEFIKY--TKAPYGGN---FPSYAFSSLTK--RTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGM---DEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQ---EALDAMEKVPIYTYE----SAGEQPEALNSLFTNQKKLFLSMAKSLNDERA-VNRQGSFLKRVEVLNVGLL 362 P + + + S S + SS+ ++RR + + +S+ C A T T + A T A++T K +FDVR++ +V + T E+ F G++V GLF + AP V +F+ Y + + Y PSY S + ++ G+ + G+I L+ E G+ +Y ++L A D + H+++GLLT ++ + P F +T +G VFG +LE + + L ++ +P Y + G +A + ++ Q++ F + AKS D R +G FL+RVEV VG+L Sbjct: 34 PQTNTRLTLYSDSSENDRHESSYLSNNRRLLIHDIGASLLSTACLAS-TSTVANAVEATTSTQYIDASQAKVTNKVYFDVRVSRQDGSFYVRDDLPNTPENQVFYGKIVVGLFAQNAPTHVEKFLSYIPSLSDYLSEENPLPSYGRSQFPRIDQSTGL-LWGGKIPSLQVAEYGGSSALQYYGRILPASLWLERDRDLQRISHNQKGLLTHANLD--LTPEFAITTRRDGTELDGRYTVFGKILEDESSDQFLSLIQDLPTYEINRPTSTDGVVEDAASVIYNAQRQFFRNTAKSFGDSRLDKTYEGKFLRRVEVTQVGVL 350
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|223997078|ref|XP_002288212.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975320|gb|EED93648.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-14 Identity = 82/263 (31.18%), Postives = 118/263 (44.87%), Query Frame = 0 Query: 138 ITAKAFFDVRI-----TGFVTGEEKATSED--FVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGN--FPSYAFSSLTKR--TPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPT-------LALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEA-LDAMEKVPIYTYESAGEQPE-----------------AL-NSLFTNQKKLFLSMAKSLNDERAVN-RQGSFLKRVEVLNVGLL 362 IT K +FDVRI T ++ ED F+G++VFGLFGK P V F+ Y PY + FPSY+ S T + G+ + G I GL +AG EYG +++ AK E + H +GLLT + + P F +T + VFG +LE + L+ +P+ T + E AL +S+FT Q+++F AK+ D R G L+RVEV VG+L Sbjct: 59 ITHKVYFDVRISRSDGTFYIRDAVSTDPEDEPFIGQLVFGLFGKNTPNHVQRFLNYVDVPYDVDNPFPSYSRSRFTTLDISTGLLI-GGTIPGLDVSTLAGGNVLEYGGRVIPAKLWVEDRNSESSEGAKVSHSFKGLLTHRNLD--LTPSFGVTTRSSTTSLDATHTVFGCILEDRGGFLERTVDLPVLTDSGKVSRTEIDGPVTVGGSGGGDLGGALASSVFTAQRRVFRDAAKTFGDSRLDKVYDGKLLRRVEVTKVGVL 318
BLAST of EWM27946.1 vs. NCBI_GenBank
Match: gi|1210526275|dbj|GAX15193.1| (hypothetical protein FisN_12Lh105 [Fistulifera solaris]) HSP 1 Score: 82.0333 bits (201), Expect = 9.381e-14 Identity = 88/314 (28.03%), Postives = 149/314 (47.45%), Query Frame = 0 Query: 80 SSSVASSSSFAQSDRRQAL-----ASLTSSIAIATCAAVITYTPLSPSNAATKNAKRLPY-PAEITAKAFFDVRITG-----FVTGEEKATSED--FVGRMVFGLFGKAAPIVVGEFIKYTKAPYG-----GNFPSYAFSSLTK--RTPGVSVEAGRIKGLKEIEIAGTREYEYGDQLLGAKGMDEPTLALK---HDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQ---EALDAMEKVPIYTYE----SAGEQPEALNSLFTNQKKLFLSMAKSLNDERA-VNRQGSFLKRVEVLNVGLL 362 SS SF S+ R+ L ASL S+ +A+ + V S ++ AT + + + A+IT K +FDVR++ +V + T E+ F G++V GLF + AP V +F+ Y + PSY S + ++ G+ + G+I L+ E G+ +Y ++L A E L+ H+++GLLT ++ + P F +T +G VFG +LE + + L ++ +P Y + G +A + ++ Q++ F + AK D R +G FL+RVEV VG+L Sbjct: 46 SSENNRQESFYPSNNRRLLIHDIGASLFSTACLASTSTV------SNADEATSSTQYIDASQAKITNKVYFDVRVSRQDGSFYVRDDLPDTPENQVFYGKIVVGLFAQNAPAHVEKFLSYIPSSSDSLLEENPLPSYGRSQFPRIDQSTGL-LWGGKIPSLQVAEYGGSSALQYYGRILPASLWLERDRDLRRISHNQKGLLTHANLD--LTPEFAITTRRDGTELDGRYTVFGKILEDESSDQFLSLIQDLPTYEINRPTSTDGVVEDAASVIYNAQRQFFRNTAKRFGDSRLDKTYEGKFLRRVEVTQVGVL 350 The following BLAST results are available for this feature:
BLAST of EWM27946.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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