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Properties
| Property Name | Value |
|---|
| Product | set and zf-mynd domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100008g18.7830.mrna |
| Orig protein id | gnl|cribi|Naga_100008g18.7830 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:889071..891357 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2653 ID=rna2653|Name=rna2653|organism=Nannochloropsis gaditana|type=mRNA|length=3135bp
ATGGCTCCTGAAACGAATCCGGAGCCGGGCCGTACTGAATTGACAAACGG
GACGGAAGCCCGTCGTTCAGAGGGCCATGCCGCCCCATCGTCTCCTGTTC
AGTCCTCCATCAGCAGCTCTCGTGATCCACACCCTGTTCTACGACCACGC
GCAGGTTTTGGAAACGGAATTCCACACGTCTCGCAACGCCTCGTTGCAGG
CATGCCCTCCTTCCCCGGAAGCCCGGTCTCCCCTTCCTTGGTCGTGACAG
GGCATGAGGATTTTCGCGTCCAAGGTCATGACAATAATGCTTTGGTGCAT
GATGAAGTCATGGCACCGTTGTCTCAAGTCGTTCTTCCGTTCCATGGGAC
TCAAGAGAGGGGTCAAGAAGTAGTCTTTTCTTCCCATGCGGCGGGTCATC
CGGTGGCTTCGGAGCACACCCCCGCGCAGGACGATGCTGGGGTTGAGAAC
AAGGAGGATGGAGAGAAGCAGAACAAGAAAGAGGGGGAAGTGCAAACCAG
TAATTGGTCTGGCATACGTAGGGATGCAGGTTCCAGCGAGACGAATGGAA
GGCGAGGTGTGGGGATTGGCGCAGAGGAGGAGGAGGAGGAGGAGGAAGAC
GAGGAGGAGGACGAGGATGACGACGGGGAGGACGAGCAAGACGAAGAAGA
CGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGATGCCAACGAGGCTG
ACGATGAGGAGGAAGACGAGGAGGTGGTAGGGGAGGACGAGGGAAACGAA
GAAGAGGAAGACGAAGCGGATGGGGGAAAAGAGGAGATTGGAAGACGCCA
TGAGCGTGAGAACATTTCGTCCGTCCAGGGGACGAGGGCTGTTGTGCCAG
TGTTCAGAGAGAGACACGGGGGAGGGCGCGGGGCTCTGTCGGGCGCCTCC
GTGTCGCATGCTTTGCCCTTGGCCGGTGGAGTCCTGCGGATGCGGCGGTC
GCGGGGAGTTTCCTCCATCCAAGCGGCTAACGGATCGCGCGTCCGCCCTC
CGTCCGCCGGCTCCGTGCGGGCATCCCCTGCAGGGTCCCGGCTAGAACCA
CCCGCTCCCTTCGCCTCCGCCGGCCCCTCTCCTTCCCCTCGGACGTGCGC
GGAAGTCAGCGGGGAACAAGCCGGCCGCGACGCCTGGGTCTGCCCCGTCT
GTTTGCAGCATTTCGATGAGCCTTGCCGCCTGCCTCGCTGCACCCACACC
TTCTGCAAGACGTGCATCCAAGGCATCATCCGAAACCTCGTGGCCGCCCA
CCACCAGCAACAGCAGCACCAGCAGCTTTCGCCCCCCGCGCCCCATTGCC
CCCTCTGCCGTCTCAAGTTCACTCCCGCCGAGGTTCAACCCGACCAGGCC
CTGTCTCAGGAGATGAGCGCCGCCAGGGTCCGCTGCGGCAATGCCCGGTG
CGAGCGGCTCATGACCCCCCTCGAAAGCAAACGGCACCAGGACGAATGTC
CTTACGGCGTGGCCCCCTGCCCCCACCAACATCACGGCTGTGGCTTTCAG
ACGCTGCGGAGGGACCTCGGTGCCCACCTGAGCATGTGTCCCTACGAGCA
GATCAAGGGCCTTTTCCCCAAGATCCGTCAGAGCAACGAGCACGTCACGG
CCGCCATGCGCGGGTGGGAAAATGCCTTCGTCTCGCAGCAACAAACCCTT
GCCACCCACGCCGCGTCTCTCCGCAACCTGGAACACCGCTCGTCATTCCC
TCTCTCCCGCCACCTCCAGCTCGTCACCCTCCTTCTCTGGGAACCATACC
TGTGGCTTCAACAAGCCGAGCGATGGTCACGTTCCTTCTCCCTGCGGCTT
TTCGCCATGCAGCTCTACGCCTCCCCGCTCGTCCTCATCCTCCTCAAAGT
CGCCGCCCGTAGCAGTCCGGACATGCCAAGGGAGCCGGGGCACGAAAGCC
GCCGGTGGTTTTTCCCTCCGGCGACGCACTACCCCGCCCCCATTGTCGGC
GCCAATTGCTGCCCGTCCTCTCCGTGCCTTGGGCCACCCTCGTCCTCGGC
ATCCTCGCTCTCCTTCCTCACACCATGGCCTGCGGAGAGCGCTAAAGAAG
GCGACGGCCAGCCTCAAGTCTGCAGCCTCGGGATGGCGCCCGAGCTGGCA
TGGTTCGTGCTGATCCTCGTCGTGGCCGTCGTCCTGGTCGAGGGCCTTCA
GGACGCACCCCCTGTCCTCTCCACCGAGCTATGCATCCCATTGCGACCTG
CCTCCTGGAGGGCATTCTTTCCCGGCTTACCTTTCCCGTCCAACCGGCGC
CGCACCTCCTCCTACGACCCCTCCTCCCCGGCACCTCCTTCCGTTCCTCC
CTCCCAAGCCACCCCGCCCGCGCCTCGTTCAGATCGAACCCCCCAGACCC
ACACTGGCACACCCCCTGCGAGCACTGGACCTCACTCGTCACCATTCATT
CCTCTCGTACTGTCCGTTCCGATCCGTTACGGAGAGTGGCTTTTGCAGCT
CGCCACTGCCTGGGCTTGTTACGCTTTCGGAGGAGGGCGGGCTCGGGCAG
ATTTCTCGGACGCGAGTTTCCCATATCTAAGCAGCTTTATCAGTGTCAGA
TATATAGCATTATTCCTGAGCCTGATCCCTGCCATGGCCGTGCAGACCCT
GACCCATCGTTGCAAGTTGGAGAAGCCAATAGTGCAAGGCATGGTTATGG
GTGTATGCATGTACTGGGTGGAGTGGCGGGCTTTGGCAGGCTCCCTTCTC
CTGGAAGAGTTCCTCCATTATGGTCTCATTTATGCGTGTGGACAATGGTT
ACTTGTGGACTCTGCGGAAAGGGAGGGCAGCGTGCGGTGGGATGCCTACG
TGCGACGCTGTATCGAAGAGCCTGGGGCACGGTTTCGTGGAATCCTACTC
CTGACTCTGGCAACGATCATGTTGCTAGTTGGACAGAGTTGGGCACTCGT
GAAAGGAATTTTTTTCCGAACCACCGGTACAATGGTGTCGTTCATGTTCC
GCATGATTCTTGGCCGCTTCATGAAGCAGACCTATCAAATGCCGCGTCCC
CCTGCCACCAGTGCCGCTGTCCGTCTTCTGCAAGAACAAGGGCAATGGCC
TCCGCCTGGTCACTACATGCTCCTCGCCTCGCGAACTTTGTTGGCATTGT
CTGTGATGGGAATCGCTCTCGTGTCCCTGTATTAA back to topprotein sequence of rna2653 >rna2653-protein ID=rna2653-protein|Name=rna2653|organism=Nannochloropsis gaditana|type=polypeptide|length=483bp
MWTTSTQMDNNKTNVSVLPSKYHGRGLFATRDFLPGEVILRERPLVAMQS
LDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEEESRRMEAEAA
TFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGS
HPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQ
RPWWDVATNPDPVRDTSAFQDMLRVLVKVAADLLRQALLTHPGAPCATYR
GSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQ
VYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHE
HDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGT
ALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSY
IRVQGTSVEDRRISLKEYGFICQCALCSSGKSG back to topmRNA from alignment at CM002459.1:889071..891357+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2653 ID=rna2653|Name=rna2653|organism=Nannochloropsis gaditana|type=mRNA|length=2287bp|location=Sequence derived from alignment at CM002459.1:889071..891357+ (Nannochloropsis gaditana)
GAGTATCAACGCATCGGCTCCTTGCGGCATCTACTTGGGATATGCGCACt
gacatttttttcctcccaggcACATGTGGACAACTTCGACGCAAATGGAC
AACAACAAAACCAACGTGAGTGTTTTGCCGAGCAAGTACCACGGTCGGGG
CTTGTTCGCTACCAGGGACTTTTTGCCTGGCGAGGTAAGgtgaaaggaga
ggacggggaggttcGAAGAGCATTTTGAACGCTCTAGCCCTCATTGTTTG
GTGTGAGGTTGCATTTGGTGTTGAATCAATCGAAACATCGCACCGAATTC
GACTGAATTGTCGAGAGACCGGTTAGCGTGTGCGTGCAAGTCTCTGAAAA
GCTTCAACATATTGACGTGAGTTCTTTCTAAAATATGCATGTGTGTGGCC
TTTGTGTACCATGGACGTAAGATAAGGCAAATACCATGTTGATGCGTTCT
TTCGAATAACCGCAAAACTCATGAGGCTATGAACTTCAGGTCATTCTCCG
GGAACGTCCCCTCGTAGCCATGCAGAGTTTAGACAATCGGCAATACGTCC
CGGCCTGTGGAGCCTGCTTCTGCTTCATTGGCACTTGCCGGCAGCATCTC
ATGCTGCTTGCGGAGGCAGGCGATCGTAGtgctttgatggaggaggagga
gtcaaGACGCATGGAAGCAGAGGCCGCCACTTTTCCAGGGGCCGTGTTGG
CCCCTCTTGTGCCATGCACGATGCGCTGTGGAGAAATGTACTGCTCGCAA
AAATGCCGGGAAGAGCATTGGGATCGCGGGCACCGTCTCCTCTGCGTCGG
GCACATTCCAGAACATGAGGCGGGTTCGCACCCCCTGGTCCAGTACAAAA
TGCACGCCTTACGGACGAATGAAATCTTTTTGCTTGTGGCGGATGTGGTG
GCCTTGATCCTCACGCGCTTTGAGAGCAATGGAGGGGATCTTTCCGCGGC
TCTCTCTCCATTCCGAGATTTTGTGCAAAGGCCCTGGTGGGACGTGGCCA
CCAACCCCGACCCCGTCCGTGACACGAGCGCCTTCCAAGATATGTTACGC
GTTTTGGTGAAGGTGGCTGCGGACTTGCTCCGACAGGCGTTGTTGACTCA
CCCCGGTGCCCCGTGTGCGACCTACCGTGGCTCGGTGGAAAGTATCGTCT
CCCCCGACTTCGTGGCGGCCGTGATCGGCATGTTCGAACAGAACAACGTA
GGCATTCGGCGTGACTCGGTGCTGTCGTCATTCCTGGTCGACCACCTCAT
GCCAAATTGTTCCATAGACTCCACGCAAGTTTATTTGCAGCTTCTCGGGC
GAATCCTagaggactgggaggagggggaggaagaggacgaggaaggggag
gagggggcgccaGACGACGGCGATGAGATGTGTGTCGCGGACGCGGGCAT
CTCAGGTGCAGATGCAAACGGCCACGAGCATGATCATCACCAGCACTTGG
GAGCTGTCCCGCCATGTTCTGTTTCTTCGAGACTCCCACCAGCGTCACCT
TCGTCGGCCCGCGCCTTGGTGGAAGCCTGCTTGGCGAAGAGCCAGACCAG
TGAGATATTCTCGGCTGTGGACGGGACGGCATTGCTTTCCCTCATATGTT
GCATGAACCATTCCTGCCAAGCAAATTGTGAGGTGCGATGGGTGGGGGGT
GTAGGGGGCGCGCCCTTGATGGCCGAGCTGGTGGCAATGGAGCATCtccc
aggaggcggggagctTTTCCAGAGCTATATTCGGGTCCAAGGTACTAGTG
TGGAGGATCGGAGAATCAGCTTGAAGGAGTACGGCTTCATTTGCCAATGC
GCTTTGTGTTCGAGCGGCAAGTCGGGGTAAACAAagtgaggagggcgtcc
gCCCTTTTTCAGAGCCTCTGTGGGAATGAAGACCCCACAGGGGAATATTT
CTGCCCGTGATGCTATCAACTCAGAGCtcattttaaaaaaagatTTGTCG
AAGTTGTTTCCCGTCGGGCGCGATTTAAGTTGGCTCTAGATAAAACACAT
GGCAAATTTATTTCTGGTAAGCCGTTGCCCTCCGTCTTCGGTCAGCTGCA
TACAGAGAGGCTCAAATAGTACGTACGAAATTATTGTAAAAGTAGCTGAA
AAGTATACCCTTGGGATCACGTGCAATAAATCAGGCGCAAGTCGTGCGTT
TTCTATGTTTTGTAAATCAGAGAGCTTCTTCCGgggtccctccttcccgt
atTCATGAAGTCGTGATGAGTGTCTCGCCCACCGACAAGTATAGCTTCAC
GGACAATCCTCCCATAAAATTtctgaaaagaagaaaa back to topCoding sequence (CDS) from alignment at CM002459.1:889071..891357+ >rna2653 ID=rna2653|Name=rna2653|organism=Nannochloropsis gaditana|type=CDS|length=2904bp|location=Sequence derived from alignment at CM002459.1:889071..891357+ (Nannochloropsis gaditana)
ATGTGGACAACTTCGACGCAAATGGACAACAACAAAACCAACGTGAGTGT
TTTGCCGAGCAAGTACCACGGTCGGGGCTTGTTCGCTACCAGGGACTTTT
TGCCTGGCGAGGTCATTCTCCGGGAACGTCCCCTCGTAGCCATGCAGAGT
TTAGACAATCGGCAATACGTCCCGGCCTGTGGAGCCTGCTTCTGCTTCAT
TGGCACTTGCCGGCAGCATCTCATGCTGCTTGCGGAGGCAGGCGATCGTA
GtgctttgatggaggaggaggagtcaaGACGCATGGAAGCAGAGGCCGCC
ACTTTTCCAGGGGCCGTGTTGGCCCCTCTTGTGCCATGCACGATGCGCTG
TGGAGAAATGTACTGCTCGCAAAAATGCCGGGAAGAGCATTGGGATCGCG
GGCACCGTCTCCTCTGCGTCGGGCACATTCCAGAACATGAGGCGGGTTCG
CACCCCCTGGTCCAGTACAAAATGCACGCCTTACGGACGAATGAAATCTT
TTTGCTTGTGGCGGATGTGGTGGCCTTGATCCTCACGCGCTTTGAGAGCA
ATGGAGGGGATCTTTCCGCGGCTCTCTCTCCATTCCGAGATTTTGTGCAA
AGGCCCTGGTGGGACGTGGCCACCAACCCCGACCCCGTCCGTGACACGAG
CGCCTTCCAAGATATGTTACGCGTTTTGGTGAAGGTGGCTGCGGACTTGC
TCCGACAGGCGTTGTTGACTCACCCCGGTGCCCCGTGTGCGACCTACCGT
GGCTCGGTGGAAAGTATCGTCTCCCCCGACTTCGTGGCGGCCGTGATCGG
CATGTTCGAACAGAACAACGTAGGCATTCGGCGTGACTCGGTGCTGTCGT
CATTCCTGGTCGACCACCTCATGCCAAATTGTTCCATAGACTCCACGCAA
GTTTATTTGCAGCTTCTCGGGCGAATCCTagaggactgggaggaggggga
ggaagaggacgaggaaggggaggagggggcgccaGACGACGGCGATGAGA
TGTGTGTCGCGGACGCGGGCATCTCAGGTGCAGATGCAAACGGCCACGAG
CATGATCATCACCAGCACTTGGGAGCTGTCCCGCCATGTTCTGTTTCTTC
GAGACTCCCACCAGCGTCACCTTCGTCGGCCCGCGCCTTGGTGGAAGCCT
GCTTGGCGAAGAGCCAGACCAGTGAGATATTCTCGGCTGTGGACGGGACG
GCATTGCTTTCCCTCATATGTTGCATGAACCATTCCTGCCAAGCAAATTG
TGAGGTGCGATGGGTGGGGGGTGTAGGGGGCGCGCCCTTGATGGCCGAGC
TGGTGGCAATGGAGCATCtcccaggaggcggggagctTTTCCAGAGCTAT
ATTCGGGTCCAAGGTACTAGTGTGGAGGATCGGAGAATCAGCTTGAAGGA
GTACGGCTTCATTTGCCAATGCGCTTTGTGTTCGAGCGGCAAGTCGGGGT
AAATGTGGACAACTTCGACGCAAATGGACAACAACAAAACCAACGTGAGT
GTTTTGCCGAGCAAGTACCACGGTCGGGGCTTGTTCGCTACCAGGGACTT
TTTGCCTGGCGAGGTCATTCTCCGGGAACGTCCCCTCGTAGCCATGCAGA
GTTTAGACAATCGGCAATACGTCCCGGCCTGTGGAGCCTGCTTCTGCTTC
ATTGGCACTTGCCGGCAGCATCTCATGCTGCTTGCGGAGGCAGGCGATCG
TAGtgctttgatggaggaggaggagtcaaGACGCATGGAAGCAGAGGCCG
CCACTTTTCCAGGGGCCGTGTTGGCCCCTCTTGTGCCATGCACGATGCGC
TGTGGAGAAATGTACTGCTCGCAAAAATGCCGGGAAGAGCATTGGGATCG
CGGGCACCGTCTCCTCTGCGTCGGGCACATTCCAGAACATGAGGCGGGTT
CGCACCCCCTGGTCCAGTACAAAATGCACGCCTTACGGACGAATGAAATC
TTTTTGCTTGTGGCGGATGTGGTGGCCTTGATCCTCACGCGCTTTGAGAG
CAATGGAGGGGATCTTTCCGCGGCTCTCTCTCCATTCCGAGATTTTGTGC
AAAGGCCCTGGTGGGACGTGGCCACCAACCCCGACCCCGTCCGTGACACG
AGCGCCTTCCAAGATATGTTACGCGTTTTGGTGAAGGTGGCTGCGGACTT
GCTCCGACAGGCGTTGTTGACTCACCCCGGTGCCCCGTGTGCGACCTACC
GTGGCTCGGTGGAAAGTATCGTCTCCCCCGACTTCGTGGCGGCCGTGATC
GGCATGTTCGAACAGAACAACGTAGGCATTCGGCGTGACTCGGTGCTGTC
GTCATTCCTGGTCGACCACCTCATGCCAAATTGTTCCATAGACTCCACGC
AAGTTTATTTGCAGCTTCTCGGGCGAATCCTagaggactgggaggagggg
gaggaagaggacgaggaaggggaggagggggcgccaGACGACGGCGATGA
GATGTGTGTCGCGGACGCGGGCATCTCAGGTGCAGATGCAAACGGCCACG
AGCATGATCATCACCAGCACTTGGGAGCTGTCCCGCCATGTTCTGTTTCT
TCGAGACTCCCACCAGCGTCACCTTCGTCGGCCCGCGCCTTGGTGGAAGC
CTGCTTGGCGAAGAGCCAGACCAGTGAGATATTCTCGGCTGTGGACGGGA
CGGCATTGCTTTCCCTCATATGTTGCATGAACCATTCCTGCCAAGCAAAT
TGTGAGGTGCGATGGGTGGGGGGTGTAGGGGGCGCGCCCTTGATGGCCGA
GCTGGTGGCAATGGAGCATCtcccaggaggcggggagctTTTCCAGAGCT
ATATTCGGGTCCAAGGTACTAGTGTGGAGGATCGGAGAATCAGCTTGAAG
GAGTACGGCTTCATTTGCCAATGCGCTTTGTGTTCGAGCGGCAAGTCGGG
GTAA back to top
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