EWM27938.1, cds2645 (CDS) Nannochloropsis gaditana

Overview
NameEWM27938.1
Unique Namecds2645
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:889144..889254 +
Alignment locationCM002459.1:889560..890900 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27938.1
Productset and zf-mynd domain-containing protein
Orig transcript idgnl|cribi|Naga_100008g18.7830.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:889144..889254 +
CM002459.1supercontigCM002459.1:889560..890900 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001214SET_dom
Homology
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|585110279|gb|EWM27938.1| (set and zf-mynd domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 997.653 bits (2578), Expect = 0.000e+0
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0
Query:    1 MWTTSTQMDNNKTNVSVLPSKYHGRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEEESRRMEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSAFQDMLRVLVKVAADLLRQALLTHPGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            MWTTSTQMDNNKTNVSVLPSKYHGRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEEESRRMEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSAFQDMLRVLVKVAADLLRQALLTHPGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG
Sbjct:    1 MWTTSTQMDNNKTNVSVLPSKYHGRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEEESRRMEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSAFQDMLRVLVKVAADLLRQALLTHPGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|831786765|ref|XP_012758213.1| (hypothetical protein SAMD00019534_007920, partial [Acytostelium subglobosum LB1] >gi|735858845|dbj|GAM17617.1| hypothetical protein SAMD00019534_007920, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 165.236 bits (417), Expect = 7.363e-42
Identity = 138/477 (28.93%), Postives = 206/477 (43.19%), Query Frame = 0
Query:   20 SKYHGRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFIGTCRQ---HLMLLAEAGDRSALMEEEESRRMEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVG-HIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRF----ESNGGDLSAA----LSPFRDFVQRPWWDVATNPDPVRDTSAFQDMLRVLVKVAADLLRQALL----THPGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSF---LVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALC 477
            S+  GRGLFA + F   EVI  E PL A+Q + NR     CG CF F+G+  +   H   L    D++ L+   ++    A    F  AVL+    C  +CGE YCS+ CR+  +   H++LCVG H PE  A    L Q+K HA+ TNE+F L A V+A +++      E+  G+           FR +  R WW+V        D +  +   +     +  LL++AL+    +HP      +   + +++S +F + V+GM E N+  IR  S L  F   L D   P      +   L+ +      +   +EED +  +    D + M           +N H H H            S                    + +  E+F   DG  L  L   +NHSC+ NC V + G        A + A+  +  G ELF +YI  + T  E+R   L  YGF C CA C
Sbjct:   24 SEAKGRGLFAEKQFEKDEVIFTEPPLFAVQHVYNRPIAWTCGNCFRFLGSLNRQINHYRRLFNLKDKTELVPLPDN--TTATPHEFQTAVLS----CFAKCGEKYCSEACRQTAFQNHHQILCVGEHTPETSA----LYQFKKHAIETNELFFLGAQVIAYLISTVVHAKEAAPGEPRIIDIICQELFRQYAHRVWWEVRV------DGNFTEQEAKQWATESLALLQKALVPVLTSHPKTNDQQF---ISTLLSMEFYSHVLGMLEMNDNSIRFKSPLEMFRRELDDMSAPEQYKKHSNNVLKGVVGAFRQYHMEQEEDCDETDCNHHDHNHMNDDHKHDHHDHSNCHSHSHGNEHAHGHSQGKSEEEEEEEEEEMEVDGNDDDEEEEEEEVFPEFDGFGLFGLQAMVNHSCEPNCLVAFEGTN-----QAYIKALRRIEPGEELFHTYID-ENTPFEEREQELVTYGFKCDCAKC 475          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|1160552073|ref|XP_020438644.1| (hypothetical protein PPL_00338 [Polysphondylium pallidum PN500] >gi|281212379|gb|EFA86539.1| hypothetical protein PPL_00338 [Polysphondylium pallidum PN500])

HSP 1 Score: 157.918 bits (398), Expect = 2.383e-39
Identity = 124/467 (26.55%), Postives = 198/467 (42.40%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEEESRRMEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVG-HIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSP-----FRDFVQRPWWDVATNPDPVRDTSA--FQDMLRVLVKVAADLLRQALLTHPGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDH-HQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGK 481
            G GLFA + F   E+I  E P+ A+Q + NR     CG C+ F+G+  + +        R+    +E++  +     T        L  C  +CGE YCS++CR+  +D  H++LCVG H PE  A    L Q+K HA+  NE+F L A V++ ++ R +    D +          F+ +  R WWDV  + +   + +     D L +L K    +L     +HP      +   + +I+S DF + ++GM E N+  I   S L  F  +    N      Q    ++  ++E + +   E E+  +                   + +GH+H   H H       S                 +A   +    E+F   DG  +  L   +NHSC  NC V +  G      +A + A+  +  G ELF SYI  +    E+R   L  YGF C C  C+S +
Sbjct:   21 GNGLFAEKSFKKDEIIFSESPMFAVQHVYNRPIAWTCGNCYRFLGSLNRQIQHY-----RTVFGVKEKTELVAFPEGTNQYEFKTGLYSCFAKCGEKYCSEECRKTAFDNHHQILCVGEHTPETSA----LYQFKKHAIDNNELFFLAAQVISFLVCRVQQLHNDQNGVRDIICAELFKQYTHRAWWDVRIDGNFTMEEAKRWSADSLALLQKAMMPIL----TSHPKTNDQKF---ISTILSMDFYSHLLGMLEMNDNSIGFKSPLEQFRKNLSAINSPEQYKQHSNNVMKSVIESFRQYHAEQEDECDDD---------DCDHDHAMEQDGHDHKSGHGH-------SSHDEEDMMEDDDHMHDEKAEGEEEDDEEVFPGFDGFGVFGLQAMINHSCVPNCLVVFEQGSS----LAYIKALRDIVPGEELFHSYIE-ESAPFEERSQELVTYGFNCDCPKCTSER 450          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|568014311|gb|ETL88488.1| (hypothetical protein L917_12441 [Phytophthora parasitica])

HSP 1 Score: 151.754 bits (382), Expect = 4.564e-37
Identity = 147/493 (29.82%), Postives = 206/493 (41.78%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLMLL-AEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            G+ ++A R    GE I  E P VAMQ  DN+++V  C  CF  +     C   +M   AE    +A  EE+ +   + EAA                F    LA   V CT  CG +YCS+ C++  + + H LLC    P+ E     + Q+  H + TNEIF L A VVA IL  F +   D++ A  P   F + PWW+V T+ D + +      ++D  R L+    +     L   L H        G        S + +++ DF + V+GMFE NN+ +          +DH                LG  L     GE   EE ++  P       +A   ++  +    EH HH        C                  E C A   T E F  V+GTAL S IC MNHSC  NC V +     GA   A + A+  +P G EL  SYI V    V++R   L+EY F+C C  C   +  
Sbjct:   35 GKAMYAARALKAGEPIWTEAPFVAMQHEDNKEFVDCCENCFVPLIDSKACWARVMACRAEVEGEAAPAEEDVATVADFEAAIAFLQKEGGKSPEESYFSVFKLAEKQVKCT--CGAIYCSETCKQIAYAQHHALLC----PQSEERETDMGQFLNHTIVTNEIFQLAAKVVAKILLLFVATK-DMAQARQPVDMFCKLPWWEVITSEDDLEEGETLEEYRDKFRALILQTFERFMGGLKENLVHLETQGELNGLTADAVLASCDEVLNVDFFSRVVGMFEMNNISME---------IDHP------------FHALGEAL-----GEASLEEKKDMPP------VLARVKVA-LEKFAEEHKHHL-------CDEEH--------EHEHEEEECYA---TDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVHDIPEGKELCISYIDVD-QDVDEREECLQEYQFVCHCDRCEEERKA 463          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|953497459|emb|CEG40946.1| (Predicted histone tail methylase containing SET domain [Plasmopara halstedii])

HSP 1 Score: 151.369 bits (381), Expect = 6.752e-37
Identity = 143/492 (29.07%), Postives = 205/492 (41.67%), Query Frame = 0
Query:   21 KYHGRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLM---LLAEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALC 477
            K  G+ +FA R    GE I  E P VAMQ  DN+++V  C  CF  +     C   ++   + AE G   AL +E  +   + EAA                F    LA   V CT  CG +YCS  C++  + + H LLC    P  E   + + Q+  H L TNEIF L A V+A IL  F +   +++ A  P   F + PWW+V T+ D + ++     ++D  R L+    D     L   L H        G        S   +++ DF + V+GMFE NN+ +  D    +  +   +   S +  +    +L R+ E  E+  +E +                     G + N HE D                             E C A     E F  V+GTAL S IC MNHSC  NC V +     GA   A + A++ +  G EL  SYI V    V++R   L+EY F+C C  C
Sbjct:   32 KDKGKAIFADRAIKAGEPIWTEAPFVAMQHEDNKEFVDCCDNCFVPLIDSKACWARVVSNSITAEGG--GALADESTATAADFEAAITFLQKEGGKSPEESYFSVFKLAESQVKCT--CGALYCSNTCKDIAYVQHHALLC----PRTEERENAMGQFLNHTLVTNEIFQLAAKVIAKILLLFIAT-QNMTQARQPVDMFCKLPWWEVITSEDDLEESETLEQYRDKFRSLISQTFDYFISGLKENLVHLEAKGELNGLSLDAMLASCADVLNVDFFSHVVGMFEMNNISMEIDHPFHA--LGEALSAASPEEEKGMPPVLARVKEALEKFTDEHKH-------------------RGDECNEHEVDQEHD------------------------EEECYA---LDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVQDIAEGEELCISYIDVD-QEVDEREECLREYQFVCYCPRC 460          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|568044530|gb|ETM41730.1| (hypothetical protein L914_12518 [Phytophthora parasitica])

HSP 1 Score: 151.754 bits (382), Expect = 1.244e-36
Identity = 147/493 (29.82%), Postives = 206/493 (41.78%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLMLL-AEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            G+ ++A R    GE I  E P VAMQ  DN+++V  C  CF  +     C   +M   AE    +A  EE+ +   + EAA                F    LA   V CT  CG +YCS+ C++  + + H LLC    P+ E     + Q+  H + TNEIF L A VVA IL  F +   D++ A  P   F + PWW+V T+ D + +      ++D  R L+    +     L   L H        G        S + +++ DF + V+GMFE NN+ +          +DH                LG  L     GE   EE ++  P       +A   ++  +    EH HH        C                  E C A   T E F  V+GTAL S IC MNHSC  NC V +     GA   A + A+  +P G EL  SYI V    V++R   L+EY F+C C  C   +  
Sbjct:   97 GKAMYAARAIKAGEPIWTEAPFVAMQHEDNKEFVDCCENCFVPLIDSKACWARVMACRAEVEGEAAPAEEDVATVADFEAAIAFLQKEGGKSPEESYFSVFKLAEKQVKCT--CGAIYCSETCKQIAYAQHHALLC----PQSEERETDMGQFLNHTIVTNEIFQLAAKVVAKILLLFVATK-DMAQARQPVDMFCKLPWWEVITSEDDLEEGETLEEYRDKFRALILQTFERFMGGLKENLVHLETQGELNGLTADAVLASCDEVLNVDFFSRVVGMFEMNNISME---------IDHP------------FHALGEAL-----GEASLEEKKDMPP------VLARVKVA-LEKFAEEHKHHL-------CDEEH--------EHEHEEEECYA---TDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVHDIPEGKELCISYIDVD-QDVDEREECLQEYQFVCHCDRCEEERKA 525          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|675170241|ref|XP_008894005.1| (hypothetical protein PPTG_03079 [Phytophthora parasitica INRA-310] >gi|566018879|gb|ETI41790.1| hypothetical protein F443_12995 [Phytophthora parasitica P1569] >gi|568105339|gb|ETN19975.1| hypothetical protein PPTG_03079 [Phytophthora parasitica INRA-310] >gi|570322483|gb|ETO70431.1| hypothetical protein F444_13096 [Phytophthora parasitica P1976])

HSP 1 Score: 151.754 bits (382), Expect = 1.269e-36
Identity = 147/493 (29.82%), Postives = 206/493 (41.78%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLMLL-AEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            G+ ++A R    GE I  E P VAMQ  DN+++V  C  CF  +     C   +M   AE    +A  EE+ +   + EAA                F    LA   V CT  CG +YCS+ C++  + + H LLC    P+ E     + Q+  H + TNEIF L A VVA IL  F +   D++ A  P   F + PWW+V T+ D + +      ++D  R L+    +     L   L H        G        S + +++ DF + V+GMFE NN+ +          +DH                LG  L     GE   EE ++  P       +A   ++  +    EH HH        C                  E C A   T E F  V+GTAL S IC MNHSC  NC V +     GA   A + A+  +P G EL  SYI V    V++R   L+EY F+C C  C   +  
Sbjct:   97 GKAMYAARALKAGEPIWTEAPFVAMQHEDNKEFVDCCENCFVPLIDSKACWARVMACRAEVEGEAAPAEEDVATVADFEAAIAFLQKEGGKSPEESYFSVFKLAEKQVKCT--CGAIYCSETCKQIAYAQHHALLC----PQSEERETDMGQFLNHTIVTNEIFQLAAKVVAKILLLFVATK-DMAQARQPVDMFCKLPWWEVITSEDDLEEGETLEEYRDKFRALILQTFERFMGGLKENLVHLETQGELNGLTADAVLASCDEVLNVDFFSRVVGMFEMNNISME---------IDHP------------FHALGEAL-----GEASLEEKKDMPP------VLARVKVA-LEKFAEEHKHHL-------CDEEH--------EHEHEEEECYA---TDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVHDIPEGKELCISYIDVD-QDVDEREECLQEYQFVCHCDRCEEERKA 525          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|570978464|gb|ETP39662.1| (hypothetical protein F442_12889 [Phytophthora parasitica P10297])

HSP 1 Score: 150.214 bits (378), Expect = 4.139e-36
Identity = 146/493 (29.61%), Postives = 205/493 (41.58%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLMLL-AEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            G+ ++A R    GE I  E P VAMQ  DN+++V  C  CF  +     C   +M    E    +A  EE+ +   + EAA                F    LA   V CT  CG +YCS+ C++  + + H LLC    P+ E     + Q+  H + TNEIF L A VVA IL  F +   D++ A  P   F + PWW+V T+ D + +      ++D  R L+    +     L   L H        G        S + +++ DF + V+GMFE NN+ +          +DH                LG  L     GE   EE ++  P       +A   ++  +    EH HH        C                  E C A   T E F  V+GTAL S IC MNHSC  NC V +     GA   A + A+  +P G EL  SYI V    V++R   L+EY F+C C  C   +  
Sbjct:   97 GKAMYAARALKAGEPIWTEAPFVAMQHEDNKEFVDCCENCFVPLIDSKACWARVMACRVEVEGEAAPAEEDVATVADFEAAIAFLQKEGGKSPEESYFSVFKLAEKQVKCT--CGAIYCSETCKQIAYAQHHALLC----PQSEERETDMGQFLNHTIVTNEIFQLAAKVVAKILLLFVATK-DMAQARQPVDMFCKLPWWEVITSEDDLEEGETLEEYRDKFRALILQTFERFMGGLKENLVHLETQGELNGLTADAVLASCDEVLNVDFFSRVVGMFEMNNISME---------IDHP------------FHALGEAL-----GEASLEEKKDMPP------VLARVKVA-LEKFAEEHKHHL-------CDEEH--------EHEHEEEECYA---TDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVHDIPEGKELCISYIDVD-QDVDEREECLQEYQFVCHCDRCEEERKA 525          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|567956213|gb|ETK81838.1| (hypothetical protein L915_12695 [Phytophthora parasitica] >gi|567984892|gb|ETL35247.1| hypothetical protein L916_12602 [Phytophthora parasitica])

HSP 1 Score: 148.288 bits (373), Expect = 1.759e-35
Identity = 146/493 (29.61%), Postives = 205/493 (41.58%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLMLL-AEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            G+ ++A R    GE I  E P VAMQ  DN+++V  C  CF  +     C   +M   AE    +A  EE+ +   + EAA                F    LA   V CT  CG +YCS+ C++  + + H LLC    P+ E     + Q+  H + TNEIF L A VVA IL  F +   D++ A  P   F + PWW+V T+ D + +      ++D  R L+    +     L   L H        G        S + +++  F + V+GMFE NN+ +          +DH                LG  L     GE   EE ++  P       +A   ++  +    EH HH        C                  E C A   T E F  V+GTAL S IC MNHSC  NC V +     GA   A + A+  +P G EL  SYI V    V++R   L+EY F+C C  C   +  
Sbjct:   97 GKAMYAARALKAGEPIWTEAPFVAMQHEDNKEFVDCCENCFVPLIDSKACWARVMACRAEVEGEAAPAEEDVATVADFEAAIAFLQKEGGKSPEESYFSVFKLAEKQVKCT--CGAIYCSETCKQIAYAQHHALLC----PQSEERETDMGQFLNHTIVTNEIFQLAAKVVAKILLLFVATK-DMAQARQPVDMFCKLPWWEVITSEDDLEEGETLEEYRDKFRALILQTFERFMGGLKENLVHLETQGELNGLTADAVLASCDEVLNVAFFSRVVGMFEMNNISME---------IDHP------------FHALGEAL-----GEASLEEKKDMPP------VLARVKVA-LEKFAEEHKHHL-------CDEEH--------EHEHEEEECYA---TDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVHDIPEGKELCISYIDVD-QDVDEREECLQEYQFVCHCDRCEEERKA 525          
BLAST of EWM27938.1 vs. NCBI_GenBank
Match: gi|570946286|gb|ETP11543.1| (hypothetical protein F441_12955 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 148.288 bits (373), Expect = 2.021e-35
Identity = 146/493 (29.61%), Postives = 205/493 (41.58%), Query Frame = 0
Query:   24 GRGLFATRDFLPGEVILRERPLVAMQSLDNRQYVPACGACFCFI---GTCRQHLMLL-AEAGDRSALMEEEESRRMEAEAAT---------------FPGAVLA-PLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALILTRFESNGGDLSAALSPFRDFVQRPWWDVATNPDPVRDTSA---FQDMLRVLVKVAADLLRQAL---LTH-------PGAPCATYRGSVESIVSPDFVAAVIGMFEQNNVGIRRDSVLSSFLVDHLMPNCSIDSTQVYLQLLGRILEDWEEGEEEDEEGEEGAPDDGDEMCVADAGISGADANGHEHDHHQHLGAVPPCSVSSRLPPASPSSARALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGAPLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRISLKEYGFICQCALCSSGKSG 483
            G+ ++A R    GE I  E P VAMQ  DN+++V  C  CF  +     C   +M   AE    +A  EE+ +   + EAA                F    LA   V CT  CG +YCS+ C++  + + H LLC    P+ E     + Q+  H + TNEIF L A VVA IL  F +   D++ A  P   F + PWW+V T+ D + +      ++D  R L+    +     L   L H        G        S + +++  F + V+GMFE NN+ +          +DH                LG  L     GE   EE ++  P       +A   ++  +    EH HH        C                  E C A   T E F  V+GTAL S IC MNHSC  NC V +     GA   A + A+  +P G EL  SYI V    V++R   L+EY F+C C  C   +  
Sbjct:   97 GKAMYAARAIKAGEPIWTEAPFVAMQHEDNKEFVDCCENCFVPLIDSKACWARVMACRAEVEGEAAPAEEDVATVADFEAAIAFLQKEGGKSPEESYFSVFKLAEKQVKCT--CGAIYCSETCKQIAYAQHHALLC----PQSEERETDMGQFLNHTIVTNEIFQLAAKVVAKILLLFVATK-DMAQARQPVDMFCKLPWWEVITSEDDLEEGETLEEYRDKFRALILQTFERFMGGLKENLVHLETQGELNGLTADAVLASCDEVLNVAFFSRVVGMFEMNNISME---------IDHP------------FHALGEAL-----GEASLEEKKDMPP------VLARVKVA-LEKFAEEHKHHL-------CDEEH--------EHEHEEEECYA---TDEDFVGVEGTALFSGICTMNHSCDPNCTVLYTK--DGA---AHVFAVHDIPEGKELCISYIDVD-QDVDEREECLQEYQFVCHCDRCEEERKA 525          
The following BLAST results are available for this feature:
BLAST of EWM27938.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110279|gb|EWM27938.1|0.000e+0100.00set and zf-mynd domain-containing protein [Nannoch... [more]
gi|831786765|ref|XP_012758213.1|7.363e-4228.93hypothetical protein SAMD00019534_007920, partial ... [more]
gi|1160552073|ref|XP_020438644.1|2.383e-3926.55hypothetical protein PPL_00338 [Polysphondylium pa... [more]
gi|568014311|gb|ETL88488.1|4.564e-3729.82hypothetical protein L917_12441 [Phytophthora para... [more]
gi|953497459|emb|CEG40946.1|6.752e-3729.07Predicted histone tail methylase containing SET do... [more]
gi|568044530|gb|ETM41730.1|1.244e-3629.82hypothetical protein L914_12518 [Phytophthora para... [more]
gi|675170241|ref|XP_008894005.1|1.269e-3629.82hypothetical protein PPTG_03079 [Phytophthora para... [more]
gi|570978464|gb|ETP39662.1|4.139e-3629.61hypothetical protein F442_12889 [Phytophthora para... [more]
gi|567956213|gb|ETK81838.1|1.759e-3529.61hypothetical protein L915_12695 [Phytophthora para... [more]
gi|570946286|gb|ETP11543.1|2.021e-3529.61hypothetical protein F441_12955 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2653rna2653Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications