EWM27953.1, cds2634 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|553181949|ref|XP_005853651.1| (centrin 3 [Nannochloropsis gaditana CCMP526] >gi|422295410|gb|EKU22709.1| centrin 3 [Nannochloropsis gaditana CCMP526] >gi|585110294|gb|EWM27953.1| centrin 3 [Nannochloropsis gaditana]) HSP 1 Score: 347.821 bits (891), Expect = 2.610e-121 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKDVISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKDVISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF
Sbjct: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKDVISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|678317041|emb|CDW86002.1| (centrin [Stylonychia lemnae]) HSP 1 Score: 165.236 bits (417), Expect = 4.527e-49 Identity = 83/156 (53.21%), Postives = 112/156 (71.79%), Query Frame = 0
Query: 16 TKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
K K R +L+ EQK+E +F LFDTD G ID HELKV MRALGF++ K+EV+ L++E D N G + + +LE+MT S RDP+EE+ KAF LF D IS+++LRRV+++LGE +S+DEL AM+ EFD+DGDG INE+EFL IMK + +
Sbjct: 20 AKRKQRQELSDEQKQEIKEAFDLFDTDKTGTIDYHELKVAMRALGFDVKKQEVLNLMKEYDRDNTGQIEYHDFLEIMTHKISERDPVEEILKAFKLFDEDNTGRISLRNLRRVARELGENLSDDELQAMIDEFDKDGDGEINEQEFLNIMKQTSIY 175
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|1049456521|emb|SBT71820.1| (centrin-3, putative [Plasmodium malariae] >gi|1070253826|emb|SCN45076.1| centrin-3, putative [Plasmodium malariae]) HSP 1 Score: 165.236 bits (417), Expect = 5.776e-49 Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 0
Query: 2 SMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
S ++ N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 10 SFTPRAITNRPISSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVAIRALGFDIKKADVIELMREYDKTNSGYIDYNDFLDIMTQKISDRDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTNLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|1084863226|ref|XP_018641662.1| (centrin-3 [Plasmodium gaboni] >gi|1011105066|gb|KYN99655.1| centrin-3 [Plasmodium gaboni]) HSP 1 Score: 164.851 bits (416), Expect = 9.436e-49 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S ++ N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSFTPRAITNRPISSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVTIRALGFDIKKADVLELMREYDKTNSGHIDYNDFLDIMTQKISERDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|1084863200|ref|XP_018641663.1| (centrin-3 [Plasmodium gaboni] >gi|1011105067|gb|KYN99656.1| centrin-3 [Plasmodium gaboni]) HSP 1 Score: 164.851 bits (416), Expect = 9.964e-49 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S ++ N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSFTPRAITNRPISSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVAIRALGFDIKKADVLELMREYDKTNSGHIDYNDFLDIMTQKISERDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|258597121|ref|XP_001347555.2| (centrin-3 [Plasmodium falciparum 3D7] >gi|579334399|gb|EUT85267.1| hypothetical protein PFAG_02962 [Plasmodium falciparum Santa Lucia] >gi|1016051783|emb|CZT98532.1| centrin-3 [Plasmodium falciparum 3D7]) HSP 1 Score: 164.466 bits (415), Expect = 1.295e-48 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S ++ N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSYTPRAITNRPISSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVAIRALGFDIKKADVLDLMREYDKTNSGHIDYNDFLDIMTQKISERDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|1016051782|emb|CZT98531.1| (centrin-3 [Plasmodium falciparum 3D7]) HSP 1 Score: 164.466 bits (415), Expect = 1.382e-48 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S ++ N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSYTPRAITNRPISSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVTIRALGFDIKKADVLDLMREYDKTNSGHIDYNDFLDIMTQKISERDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|1027949676|ref|XP_016655190.1| (centrin-3, putative [Plasmodium chabaudi chabaudi] >gi|577147225|gb|EUD70350.1| centrin-2 [Plasmodium vinckei petteri] >gi|675219400|emb|CDS45958.1| centrin-3, putative [Plasmodium chabaudi chabaudi] >gi|1061790970|emb|SCM02997.1| centrin-3, putative [Plasmodium chabaudi adami] >gi|1068919193|emb|SCM00426.1| centrin-3, putative [Plasmodium chabaudi chabaudi] >gi|1068923930|emb|SCM07722.1| centrin-3, putative [Plasmodium chabaudi adami]) HSP 1 Score: 163.696 bits (413), Expect = 2.630e-48 Identity = 83/171 (48.54%), Postives = 117/171 (68.42%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S + N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSFTPRPITNRPISSNRRRGRNEITEEQKNEIKEAFDLFDTEKTGKIDYHELKVAIRALGFDIKKADVLELMREYDKTNSGYIDYNDFLDIMTQKISDRDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|675230951|emb|CDU16717.1| (centrin-3, putative [Plasmodium yoelii] >gi|675236167|emb|CDZ11248.1| centrin-3, putative [Plasmodium yoelii]) HSP 1 Score: 163.696 bits (413), Expect = 2.748e-48 Identity = 83/171 (48.54%), Postives = 117/171 (68.42%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S + N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSFTPRPITNRPISSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVAIRALGFDIKKADVLELMREYDKTNSGYIDYNDFLDIMTQKISDRDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179
BLAST of EWM27953.1 vs. NCBI_GenBank
Match: gi|675225306|emb|CDS45244.1| (centrin-3, putative [Plasmodium berghei ANKA] >gi|991454538|emb|CXI09912.1| centrin-3, putative [Plasmodium berghei] >gi|1061781147|emb|SCL92927.1| centrin-3, putative [Plasmodium berghei] >gi|1063415423|emb|SCN22981.1| centrin-3, putative [Plasmodium berghei] >gi|1068928616|emb|SCM15753.1| centrin-3, putative [Plasmodium berghei] >gi|1068933248|emb|SCM17548.1| centrin-3, putative [Plasmodium berghei]) HSP 1 Score: 163.31 bits (412), Expect = 3.853e-48 Identity = 83/171 (48.54%), Postives = 117/171 (68.42%), Query Frame = 0
Query: 1 MSMLTHSLGNLQMPSTKSKGRYQLTLEQKEEFTTSFQLFDTDGKGAIDLHELKVLMRALGFNIPKREVVALVREIDPTNHGMVSFDTYLEVMTDMASRRDPLEEMKKAFLLFAGDKD-VISVQDLRRVSKQLGEKMSEDELAAMVAEFDRDGDGCINEEEFLQIMKGSGTF 170
+S + N + S + +GR ++T EQK E +F LFDT+ G ID HELKV +RALGF+I K +V+ L+RE D TN G + ++ +L++MT S RDP EE+ KAF LF D IS+++LRRVS++LGE +S+DEL AM+ EFD+D DG I++EEFL IMK + +
Sbjct: 9 VSFTPRPITNRPINSNRRRGRNEITDEQKNEIKEAFDLFDTEKTGKIDYHELKVAIRALGFDIKKADVLELMREYDKTNSGYIDYNDFLDIMTQKISDRDPTEEIIKAFKLFDDDDTGKISLKNLRRVSRELGENLSDDELQAMIDEFDKDMDGEISQEEFLSIMKQTSLY 179 The following BLAST results are available for this feature:
BLAST of EWM27953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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