EWM28107.1, cds2559 (CDS) Nannochloropsis gaditana

Overview
NameEWM28107.1
Unique Namecds2559
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:682849..682863 +
Alignment locationCM002459.1:683206..685440 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28107.1
Productabc subfamily abcg
Orig transcript idgnl|cribi|Naga_100036g16.2527.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:682849..682863 +
CM002459.1supercontigCM002459.1:683206..685440 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
IPR013525ABC_2_trans
IPR003593AAA+_ATPase
Homology
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|585110451|gb|EWM28107.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 1542.32 bits (3992), Expect = 0.000e+0
Identity = 749/749 (100.00%), Postives = 749/749 (100.00%), Query Frame = 0
Query:    1 MESDQRSQKGTNVGLHDEIAYESIDSHASPSRLGSMDRLGSSRLVTVGLAYEVCRDRGVVTGIKDAATVEDGTGCPAQGERGPSVDRAGTKSGSSNHLRLPALETAFSTKTQTKLRVSRGKSYEGEHFSLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQEAVLEGLNAFPLSTNLWALASAAVVFRIIAYLILLLRTTRERIVVR 749
            MESDQRSQKGTNVGLHDEIAYESIDSHASPSRLGSMDRLGSSRLVTVGLAYEVCRDRGVVTGIKDAATVEDGTGCPAQGERGPSVDRAGTKSGSSNHLRLPALETAFSTKTQTKLRVSRGKSYEGEHFSLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQEAVLEGLNAFPLSTNLWALASAAVVFRIIAYLILLLRTTRERIVVR
Sbjct:    1 MESDQRSQKGTNVGLHDEIAYESIDSHASPSRLGSMDRLGSSRLVTVGLAYEVCRDRGVVTGIKDAATVEDGTGCPAQGERGPSVDRAGTKSGSSNHLRLPALETAFSTKTQTKLRVSRGKSYEGEHFSLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQEAVLEGLNAFPLSTNLWALASAAVVFRIIAYLILLLRTTRERIVVR 749          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 446.047 bits (1146), Expect = 4.194e-143
Identity = 240/694 (34.58%), Postives = 397/694 (57.20%), Query Frame = 0
Query:   70 EDGTGCPAQG----ERGPSVDRAGTK-----SGSSNHLRL-----PALETAFSTKTQTKLRVSRGKSYEGEHFSLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEI----PNQEAVLEGLNAFP--LSTNLWALASAAVVFRIIAYLILLLRTTR 743
            E  TG P+ G      G + D   T      SG ++H+ L     PA++         KLR + G++   ++  L+W  +L V        E+   G +S                  K IL  + G  + GQ+MAVMGSSG GK++FL+C+S+RNQ F GN+++N K  D +Y+ + GFV+Q+DLF+PT TVREHLTFHA++R +  +  + RL+RVE ++  V + H  ++++GGPG+  RG+SGGE++R++F TELL++P I+FADE T+GLD+ M + VC+ +R++A  G++++  IHQPSS  F LFTH++L+ +GR++Y GP   L +YF   G   ++CP  HNPADFF+  +++ P +   S  R+ +L   Y+ S        W+ ++    L L H++  M+HF AS++TQF    +RN++  FR      A   +  + G+ILG  Y    +   T E  +N  GLFFL  +   ++ ++  + AF +E KVF+REN +GANRV +Y+L++T +     I  P +FA +V+ +A LQ +   F+ +   +IL A C  S+GY +++MTS   +A A+AP+ ++P  +F+G++ DL+    +  +L + SI++Y    ++IN++          +        AV+  +   P  +   +  L +  ++FR++A+  L  ++ R
Sbjct:   59 ESETGSPSMGIVDNRPGSTSDTFATHATKKGSGQASHVALDLRVPPAVK---------KLRQT-GRAEHSQNLELAWDFSLSVKATKR---EAKLSGSYS------------------KEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGGPGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLLAKGRIVYNGPMATLQSYFSSLG---VICPHFHNPADFFINQISIVPTEQEASMARLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKAVSMKHFHASTWTQFYYTMKRNIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTD---TQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQYTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAFFFLTRKSNR 715          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 395.971 bits (1016), Expect = 9.298e-125
Identity = 226/580 (38.97%), Postives = 338/580 (58.28%), Query Frame = 0
Query:  173 KKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHR---SFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFP--PSSTRFTSEIP--NQEAVLEGLNAFP--LSTNLWALASAAVVFRIIAYLILLLRTTR 743
            KKTIL+G+ G    G +MA+MG+SG GK+S L+CIS+RNQ F GN+FV+ K  D  +F L  +V+QDDLF PT TVREHL FHA++R    V+  ++ +RVE+++  V L+  SD+L+GG  S IRG+SGGER+RV+ ATELLS+P I+F DE T+GLD+ MA++VC  LRK+A  G++V+  IHQPSSD F LFTH+ L+ +GR+ Y+G       YF   G     CPP  NPADFF+  +A+ P D   S  R+  +   YQ S  R     W   V  P +L   R      +  + A++ TQF    +R +    R+P+   A L +  + G++LGL Y    +   T + V+N  G+ F+  +   +   +  +     +  VFMRE  AGANRV +Y+L++T +    +I  P VF  +V+ + GL+ +   +  F  V+IL A    S+GY L+A+  +   A+A   V+++P  +FSG++ D+     +   L ++SI+RY   A++INE+   P +  F    P     AVL  + A P  LS N+  L    + FR++A++ L   +TR
Sbjct:   66 KKTILEGVTGSVRSGNMMALMGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAERVESILLDVGLQGCSDALIGGASSLIRGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLLAKGRMAYLGELPKAVDYFAALGHA---CPPNFNPADFFIEELAVVPSDYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVD-PAVLSKPRRRTGIAITEYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYF---DQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPINCGFNVICPFRTGNAVLTYVGAAPDELSFNMGMLFVFMLCFRLVAFMALKWHSTR 638          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 373.244 bits (957), Expect = 1.526e-115
Identity = 220/590 (37.29%), Postives = 334/590 (56.61%), Query Frame = 0
Query:  159 KGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHP--QDPVGSQKRIDNLVAIYQASPERVAMSDWQQDV--AFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAP-NAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQEAVLEGLNAFPLSTNLWALASAAVVFRIIAYLILLLRTTR 743
            +G S   S   +  ++ IL  +VG AEKGQ++A+MG+SG GK+S L+CIS+RN  F G ++++   +D  +FS + +VHQ DLF  T TVREHLTFHA++R    V    RL+RVE +I  VNL  V+DSL+GGP +FIRG+SGGER+R+S ATELLSDP IIFADE T+GLDA MA SVC  L+ +A  GRLV   IHQPSS++F LFTH+ML+ +G+  Y G R     YF       L CP  +NPAD+ +  +A++   + P   +  +++++ +YQ+S        W  DV       +        R F A+S+TQF   ++R V++  R+P+     LG     G+ILGL Y   P ++ AT    +N  G  FL  +   +  ++        +  VFMRE    ANR  +Y+L  +      ++  P +F  + + L G       FFIF   ++L A    S+GY L+ +T    +A+A+ PVL+LP  +++G+++       +   L  +S+++YA  A+++NE+   S ++T ++ N      G+    +   +  L      FR +AY+ LL+R  R
Sbjct:  104 RGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASM--LGLECPQFYNPADYLIEKLAVNVLLEKP---EVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSAT----KNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY--GSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKR 682          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|553179694|ref|XP_005852746.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422295790|gb|EKU23089.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 372.089 bits (954), Expect = 2.334e-114
Identity = 220/590 (37.29%), Postives = 334/590 (56.61%), Query Frame = 0
Query:  159 KGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQSFVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHP--QDPVGSQKRIDNLVAIYQASPERVAMSDWQQDV--AFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAP-NAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQEAVLEGLNAFPLSTNLWALASAAVVFRIIAYLILLLRTTR 743
            +G S   S   +  ++ IL  +VG AEKGQ++A+MG+SG GK+S L+CIS+RN  F G ++++   +D  +FS + +VHQ DLF  T TVREHLTFHA++R    V    RL+RVE +I  VNL  V+DSL+GGP +FIRG+SGGER+R+S ATELLSDP IIFADE T+GLDA MA SVC  L+ +A  GRLV   IHQPSS++F LFTH+ML+ +G+  Y G R     YF       L CP  +NPAD+ +  +A++   + P   +  +++++ +YQ+S        W  DV       +        R F A+S+TQF   ++R V++  R+P+     LG     G+ILGL Y   P ++ AT    +N  G  FL  +   +  ++        +  VFMRE    ANR  +Y+L  +      ++  P +F  + + L G       FFIF   ++L A    S+GY L+ +T    +A+A+ PVL+LP  +++G+++       +   L  +S+++YA  A+++NE+   S ++T ++ N      G+    +   +  L      FR +AY+ LL+R  R
Sbjct:  172 RGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFDGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASM--LGLECPQFYNPADYLIEKLAVNVLLEKP---EVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSAT----KNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY--GSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKR 750          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|1022764120|gb|KZS09609.1| (ATP-binding cassette sub-family G member 2 [Daphnia magna])

HSP 1 Score: 332.798 bits (852), Expect = 2.069e-100
Identity = 203/662 (30.66%), Postives = 345/662 (52.11%), Query Frame = 0
Query:  109 TKTQTKLRVSRGKSYEGEHFSLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQ---SFVGNIFVNEKEIDGRYFS-LAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRSFKMRH---------------FQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEI-PNQEAVLEG-LNAFPLSTNLW-----ALASAAVVFRIIAYLILLLRTTRE 744
            ++  ++ R+S GK    + F++++T T       P      +  ++    +G     S P    +K ILD + G    G+ +A+MG+SG GKT+ LNC++ RN      +G  F+N + ++    + ++G+V QDDLF+PT TV+EHL F ALLR D  +    R+ RV  +I  + L    ++++G P   I+G+SGGER+R++FA+E+L++P ++F DE T+GLD+ MA+++   L+ +A+ G+ V+ TIHQPSS+VFALF  ++LM +GR  ++GP +   ++F  QG P   CPP +NPAD+++  +A+ P   + S+K+   +   Y++S         Q      E++  +RSFK+                 ++AS + QFR  F R++ ++ R+P              +++ L Y          ++VRN +G  F+    +    ++  +   ++E  +F+RE+  G  R   Y+L KT     V +  PF+F  + +   GL    E FFI  G++IL A    S GY ++ +    Q+A+A+A  L++P ++F G          + +++ YIS   Y   A+ IN++     RF   + PN     E  L  F    NL+      L    V FR +A+  LL +T R+
Sbjct:   26 SRPTSQKRLSNGK----DDFAVAFTTT------QPVTYSWENIEIYLETSQGNCFKRSPP---VQKRILDNVTGCVRPGEFLAIMGASGAGKTTLLNCLTFRNTGKLKILGQRFLNGETVNTDTLARISGYVQQDDLFVPTLTVKEHLQFQALLRMDKYLTYSERMTRVGQVIHELGLTKCENTMIGNPERGIKGISGGERKRLAFASEVLTNPSLMFCDEPTSGLDSYMAQNIVQVLKNIASTGKTVVCTIHQPSSEVFALFDRILLMAEGRTAFLGPVSDALSFFSSQGLP---CPPNYNPADYYIHTLAIVPGQEIESRKKSKEICDAYESS---------QAGQQILEIVKANRSFKLSESQEFQLDEVNVRKSPYKASWFAQFRAVFWRSLISVLREPAVLRVKAFQTIFISMLIALIYQ---GQTLQYDNVRNIQGALFIFLTNMTFQNVFGVVNVITSELPIFLREHFNGMYRTDIYFLCKTLADLPVYVVFPFIFVTIPYYAIGLNPEAERFFIACGIVILVANVATSFGYMISCLAGSTQVALAMAAPLIIPLLLFGGFFLQNGAVPIYFDWMRYISWFMYGNEALSINQW--VGVRFNDTVCPNGVCTGEQILKNFDFDPNLFYRDIGGLCGLIVGFRFLAFFALLSKTYRK 657          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|1022764119|gb|KZS09608.1| (ABC protein, subfamily ABCG [Daphnia magna])

HSP 1 Score: 327.02 bits (837), Expect = 3.252e-98
Identity = 202/600 (33.67%), Postives = 320/600 (53.33%), Query Frame = 0
Query:  168 PPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQ---SFVGNIFVNEKEIDGRYFS-LAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQAS------PERVAMSDWQQDVAFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDP-----MSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINE-----FPPSSTRFTSEIPNQEAVLEGLNAFP--LSTNLWALASAAVVFRIIAYLILLLRTTRER 745
            PP R K  ILD + G    G+ +A+MG+SG GKT+ LNC++ RN       G  ++N  +++    + ++G+V QDDLF+ T TV EHL F ALLR D  +  + R+ RVE +I  + L   S S++G P   I+G+SGGER+R++FA+E+L++P ++F DE T+GLD+ MA+++   L+ +A+ G+ V+ TIHQPSS+VFALF  ++LM +GR  ++GP     ++F  QG P   CPP +NPAD+++  +A  P   V S+K+I      Y  S       E V  +   +     EL L     +   ++AS + Q R    R+  ++ R+P      +F     +  I  I  G  Y          ++VRN +G  F+    +    ++  I   + E  VF+RE+  G  R   Y+LSKT     V I  PF+F  + +   GL      FFI  G++IL A    S GY ++ MTS  ++A+A+ P  ++P ++F G          + ++L Y+S   YA  A+ IN+     F  + +     I  ++ +L+  +  P     N+  L +  V FRIIA+L+LL +T R+ 
Sbjct:   68 PPIRKK--ILDNVTGIVRPGEFLAIMGASGAGKTTLLNCLTFRNSGQLKISGERYLNGAKVNTDTLARISGYVQQDDLFISTLTVHEHLRFQALLRMDTHLTYEERMTRVEEVINELGLTKCSGSMIGHPERGIKGISGGERKRLAFASEVLTNPSLMFCDEPTSGLDSYMAQNIVQVLKNIASTGKTVVCTIHQPSSEVFALFDRILLMAEGRTAFLGPVGDALSFFSAQGMP---CPPNYNPADYYIHTLATVPGHEVESKKKIKEFCDTYDTSDAGKSVQEMVIANRSIKSSRSQELDLEPVKIQRSPYKASWFAQLRAVMWRSFLSVRREPAVLKVKAFQTIFIASLIALIFQGQTYE--------FQNVRNFQGALFVFLTNMTFQSVFGVINDITLELPVFLREHFNGMYRTDIYFLSKTTADLPVYIVFPFLFVAIPYYAIGLNPDVGRFFIACGIVILLANVATSFGYVISCMTSSTRVALAVGPPFIIPLLLFGGFFLRNGSVPVYFDWLRYVSWFMYANEALSINQWNGISFNDTMSPCPQHICTEDYILKQFDFNPNNFYRNIGCLFALIVGFRIIAFLVLLKKTYRKN 654          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|1022764121|gb|KZS09610.1| (ATP-binding cassette sub-family G member 2 [Daphnia magna])

HSP 1 Score: 325.479 bits (833), Expect = 1.560e-97
Identity = 195/595 (32.77%), Postives = 326/595 (54.79%), Query Frame = 0
Query:  168 PPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQ---SFVGNIFVNEKEIDGRYFS-LAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASP------ERVAMSDWQQDVAFPELLLYHRSFKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGA-ALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQ----EAVLEGLNAFP--LSTNLWALASAAVVFRIIAYLILLLRTTRER 745
            PP   +K ILD + G    G+ +A+MG+SG GKT+ LNC++ RN       G  F+N  +++    + ++G+V QDDLF+PT TV+EHL F ALLR +  +  D R+ RV  +I  + L+   ++++G P   I+G+SGGER+R++FA+E+L++P ++F DE T+GLD+ MA+++   L+ +A+ G+ V+ TIHQPSS+VFALF  ++LM +GR  ++GP +   ++F  QG P   CPP +NPAD+++  +A  P   + S+K+   +   Y++S       E V  +         E  L     K   ++AS + QFR    R+V ++ R+P+     A  + FI+ II  L Y          ++VRN +G  F+    +    ++  + A + E  +F+RE+  G  R   Y++ K+     + I  PF+F L+ +   GL  + + FFI  G+ IL A    S G+ ++ +     +A+A+AP L++P ++F G          + +++ YIS   Y   A+ IN++   S   TS  PN     E +L   +  P     ++  L +  +  RI+A+L LL +T R+ 
Sbjct:   77 PP--IQKRILDNVTGCVRPGEFLAIMGASGAGKTTLLNCLTFRNTGKLKISGERFLNGAKVNTDTLARISGYVQQDDLFIPTLTVKEHLEFQALLRMEKHLNYDERMIRVGEVIHELGLKKCENTVIGNPERGIKGISGGERKRLAFASEVLTNPSLMFCDEPTSGLDSYMAQNIVQVLKNIASTGKTVVCTIHQPSSEVFALFDRILLMAEGRTAFLGPASDALSFFSSQGLP---CPPNYNPADYYIHTLATVPGQEIESRKKSKEICDSYESSQAGQQILEIVKANRSLNSTESQEFELAEVKAKKSPYKASWFAQFRAVLWRSVISVLREPVVLRVKAFQTIFISAII-ALIYQ---GQTLEFDNVRNIQGALFIFLTNMTFQNVFGVVNAITGELPIFLREHFNGMYRTDIYFICKSIADLPLFILFPFIFVLIPYFAIGLNPAADRFFIACGITILVANVASSFGFMISCLAGTTDVALALAPPLIIPLLLFGGFFLSNEDVPVYFDWMRYISWFMYGNEALSINQWVGVSFNDTS-CPNNVCTGEQILASFDFNPDYFYRDIGGLFALILGLRILAFLALLGKTYRKN 661          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|1207969180|ref|XP_021375246.1| (protein white-like isoform X1 [Mizuhopecten yessoensis] >gi|1207969182|ref|XP_021375247.1| protein white-like isoform X1 [Mizuhopecten yessoensis] >gi|1205889069|gb|OWF39975.1| Protein white [Mizuhopecten yessoensis])

HSP 1 Score: 326.635 bits (836), Expect = 1.831e-97
Identity = 185/607 (30.48%), Postives = 332/607 (54.70%), Query Frame = 0
Query:  159 KGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQS----FVGNIFVNEKEIDGRYFSLAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRS--FKMRHFQASSYTQFRLCFQRNVRALFRDPMSFGAALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRF---TSEIPNQE---------AVLEGLNAFPLST--NLWALASAAVVFRIIAYLILLLRTTRER 745
            K R      P     + +L  + G  + G L+A++G+SG GK++ +N ++ RNQ+      G++ +N  E+     +++ ++ QDDLF+ T TVREHL F ALLR D  + K  RL++VE +I+ + L   +D+++G PG  ++G+SGGER+R++FA+E+LS+P +IF DE T+GLD+ MAK++   L+ + + GR +I T+HQPSS+VF +F  ++L+T+GRV Y GP      +F  +   +  CPP +NPAD+F+  +A+ P      ++R++++   ++ +     M D   +++      Y+ S  F    + AS + QF     R+     RDP+ F A +    +  ++ GL Y    N       V+N  GL FL  +Q+ +  L+A I  F  E  +F+RE  +G   V  Y+LSK           PFVF  +++ + GL ++ + + I   V++ +A   GS GY ++   +   +A+A+AP ++ P ++F G   + +    +  ++ Y+S  +++   + +N++      +    +E P  E         A+LEG N    +   +L  +A+  V FR++++++L++R  R +
Sbjct:  106 KDRGCCRGPPKGAEPRHLLRNVSGIVKPGTLLAILGASGAGKSTLMNVLTCRNQTKNLVVQGDVRLNGVEVGKSIRNMSAYLQQDDLFIGTLTVREHLIFRALLRMDKRIGKKERLQKVEEVIRELGLSKCADTVIGTPGR-VKGISGGERKRLAFASEVLSNPPLIFCDEPTSGLDSYMAKNIVQTLKLLVSKGRTIITTLHQPSSEVFEMFDQLLLLTEGRVAYFGPANEALEFFSNE---NFQCPPNYNPADYFIMTLAILPDSVENCKRRVESICNSFEKTSTCKGMMDEIGEISSSSSNGYNLSSDFDSSRYGASWFAQFINVLWRSWVTNVRDPIVFKAKIFQTIVISVLFGLIYLKT-NDEYNQNDVQNINGLLFLLLIQMTMQNLFAVINLFPLELPIFLREYGSGLYGVDVYFLSKNIAELPAFTIFPFVFCTILYWMTGLYQAVDNYLILCAVIVFSANIAGSFGYMVSTAFASVNVALAVAPAVITPLLLFGGFFLNNNTIPDWLLWVKYLSWFQFSNELISVNQWKNVDHIYCTNVTEYPAPEGSPVCETGAAILEGFNFKEDNQFLDLMVMAALFVGFRLLSFILLVIRAKRSK 707          
BLAST of EWM28107.1 vs. NCBI_GenBank
Match: gi|321472547|gb|EFX83517.1| (ABC protein, subfamily ABCG [Daphnia pulex])

HSP 1 Score: 325.479 bits (833), Expect = 2.078e-97
Identity = 208/660 (31.52%), Postives = 348/660 (52.73%), Query Frame = 0
Query:  112 QTKLRVSRGKSYEGEHFSLSWTITLQVPIKNPAVGESTDKGLWSLLRKGRSKASSDPPRRTKKTILDGLVGRAEKGQLMAVMGSSGCGKTSFLNCISMRNQ---SFVGNIFVNEKEIDGRYFS-LAGFVHQDDLFLPTETVREHLTFHALLRCDPCVRKDLRLKRVETLIKTVNLEHVSDSLLGGPGSFIRGLSGGERRRVSFATELLSDPVIIFADEFTTGLDASMAKSVCLALRKVAAGGRLVIGTIHQPSSDVFALFTHVMLMTQGRVIYMGPRTALAAYFERQGDPSLLCPPRHNPADFFVTLVALHPQDPVGSQKRIDNLVAIYQASPERVAMSDWQQDVAFPELLLYHRSFKMRH---------------FQASSYTQFRLCFQRNVRALFRDPMSFGA-ALGSGFITGIILGLAYATAPNAPATAEHVRNTEGLFFLANLQVFLIILYATIMAFSAETKVFMRENQAGANRVGAYYLSKTFTGWAVEIAMPFVFALLVWALAGLQRSPEGFFIFAGVMILNALCFGSIGYCLAAMTSDPQIAMAIAPVLVLPNVVFSGIMYDLSLTYGFREFLAYISILRYAQAAMLINEFPPSSTRFTSEIPNQ-----EAVLEGLNAFP--LSTNLWALASAAVVFRIIAYLILLLRTTRE 744
            +++ R ++  S   + F++S+T +       PA     +  ++    +G     S P    +K ILD + G    G+ +A+MG+SG GKT+ LNC++ RN       G+ ++N + ++    + ++G+V QDDLF+PT  V+EHL F ALLR D  +    R+ RV  +I  + L    ++++G P   I+G+SGGER+R++FA+E+L++P ++F DE T+GLD+ MA+++   L+ +A+ G+ V+ TIHQPSS+VFALF  ++LM +GR  ++GP     ++F  QG P   CPP +NPAD+++  +A  P   V S+K+   +   Y      V  +  QQ +   E++  +RSF +                 ++AS + QFR  F R++ ++ R+P      A  + FI+ +I  L Y          ++VRN +G  F+    +    ++  +   ++E  +F+RE+  G  R   Y+L KT     V I  PFVF  + + + GL    E FFI  G++IL A    S GY ++ M    QIA+A+A  L++P ++F G          + E++ YIS   Y   A+ IN++  S   F   I  +     E +LE  +  P     ++  L    V FR++A+  LL +T R+
Sbjct:   49 ESRSRSNKLHSNGKDDFTVSFTTS------PPATYSWENIEIYLETSQGNCFKRSAP---VQKRILDNVTGCVRPGEFLAIMGASGAGKTTLLNCLTFRNTGKLKISGDRYLNGEVVNTDTLARISGYVQQDDLFIPTLKVKEHLQFQALLRMDKHLTYAERMIRVGQVIHELGLSKCENTVIGNPERGIKGISGGERKRLAFASEVLTNPSLMFCDEPTSGLDSYMAQNIVQVLKNIASTGKTVVCTIHQPSSEVFALFDRILLMAEGRTAFLGPVGDALSFFSAQGLP---CPPNYNPADYYIHTLATIPGQEVESKKKSREICDAY------VVSTAGQQIL---EIVKANRSFNLTESQEFQLDDVKVKRSPYKASWFAQFRAVFWRSLLSVLREPAVLRVKAFQTIFISALI-ALIYQ---GQTLQYDNVRNIQGALFIFLTNMTFQNVFGVVNVITSELPIFLREHFNGMYRTDIYFLCKTLADLPVYIVFPFVFVTIPYFIIGLNPGAEQFFIACGIVILVANVATSFGYMISCMAGSTQIALAMAAPLIIPLLLFGGFFLQNGAVPFYFEWMRYISWFMYGNEALSINQW--SGVTFNDTICPRGVCTGEKILENFDFNPNFFYRDIGGLCGLIVGFRLVAFFALLSKTYRK 681          
The following BLAST results are available for this feature:
BLAST of EWM28107.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110451|gb|EWM28107.1|0.000e+0100.00abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102173|gb|EWM21831.1|4.194e-14334.58abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102296|gb|EWM21944.1|9.298e-12538.97white [Nannochloropsis gaditana][more]
gi|585110513|gb|EWM28168.1|1.526e-11537.29abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553179694|ref|XP_005852746.1|2.334e-11437.29abc subfamily abcg, partial [Nannochloropsis gadit... [more]
gi|1022764120|gb|KZS09609.1|2.069e-10030.66ATP-binding cassette sub-family G member 2 [Daphni... [more]
gi|1022764119|gb|KZS09608.1|3.252e-9833.67ABC protein, subfamily ABCG [Daphnia magna][more]
gi|1022764121|gb|KZS09610.1|1.560e-9732.77ATP-binding cassette sub-family G member 2 [Daphni... [more]
gi|1207969180|ref|XP_021375246.1|1.831e-9730.48protein white-like isoform X1 [Mizuhopecten yessoe... [more]
gi|321472547|gb|EFX83517.1|2.078e-9731.52ABC protein, subfamily ABCG [Daphnia pulex][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2567rna2567Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications