EWM28108.1, cds2540 (CDS) Nannochloropsis gaditana

Overview
NameEWM28108.1
Unique Namecds2540
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:631794..633034 +
Alignment locationCM002459.1:633272..633890 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28108.1
Productsec1-like family protein
Orig transcript idgnl|cribi|Naga_100036g38.2528.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:631794..633034 +
CM002459.1supercontigCM002459.1:633272..633890 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0016192vesicle-mediated transport
GO:0006904vesicle docking involved in exocytosis
Vocabulary: INTERPRO
TermDefinition
IPR027482Sec-1-like_dom2
IPR001619Sec1-like
Homology
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|585110452|gb|EWM28108.1| (sec1-like family protein [Nannochloropsis gaditana])

HSP 1 Score: 1279.62 bits (3310), Expect = 0.000e+0
Identity = 619/619 (100.00%), Postives = 619/619 (100.00%), Query Frame = 0
Query:    1 MSSLSRRGAENSPPKNFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGKPIARSLRKHEKGRLGKQPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAVKN 619
            MSSLSRRGAENSPPKNFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGKPIARSLRKHEKGRLGKQPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAVKN
Sbjct:    1 MSSLSRRGAENSPPKNFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGKPIARSLRKHEKGRLGKQPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAVKN 619          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|219118292|ref|XP_002179924.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408977|gb|EEC48910.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 439.884 bits (1130), Expect = 3.425e-144
Identity = 233/587 (39.69%), Postives = 356/587 (60.65%), Query Frame = 0
Query:   39 GWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPR-YG-AVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHG---QTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKA---LLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNV--QKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQE---GKPIAR-SLRKHEKGRLGKQPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYI 611
            GW V+++D+ A+RV+SA VGMYD+ME R+TL+E L K R P P+M  IY + P  DSV  ++ D+++P   R YG AV L+FL ++ D L+ ++      L+RV+   EIN++FLA E  +F  DM  + P  +  R +  ++ ++  KLV +C  LNEYPH+R+ Q S +   LAS+    ++++V+    WWYHG   +    +RER TLL+LDRA+D LTPL+H+  +Q MV + L ++ D +TFQ+E K     T+A   LL++ D+LWVE R +HIA V+E +  R +E ++++ G+    K      +S  ++   LK LPEYRE+  KL  +  ++ + M  F+  G+  +SELEQTLATG D DGR+ K   +++ +E  L+ +       + ++RLI I  ++Q G+ + DRR+L+GAA L+R+    L  LE LG+++     KN       S ST     +D  SEY+ASRYV PLK ++ + V   LS E YPSILPMP        P AR S+R   K R        SGGRS+ F+ GG+++SELR A +VME+  +EV++G T++++   ++
Sbjct:    1 GWKVLILDNHAMRVISAAVGMYDIMEKRITLVESLDKKRAPFPDMGAIYFLDPNADSVAKLVADWSDPSNKRLYGSAVFLYFLGRLPDNLLAQIKMCRPLLKRVKGLMEINVDFLAVEERAFTFDMRHAFPSFYLRRGNTPIELDIAEKLVTVCATLNEYPHIRYKQSSGICTSLASVFHLKMDEYVSQNPSWWYHGGPVKNQAANRERGTLLLLDRADDCLTPLMHDFIYQSMVQDLLKMDGDRITFQAETKNDPSRTEAKDVLLDDRDSLWVELRGKHIASVIETLSGRIREIMNSSTGSAFGGKKQQQGNLSISQMAAALKALPEYREVMSKLSQHMHISHECMEVFKHNGLYNLSELEQTLATGKDEDGRTPKLSDIMERVEQELLKMRDP----KARLRLILIATVSQGGLRQQDRRRLMGAAELSRKQIRTLNSLEILGLSIFASTEKNRLVGRLSSGST-----SDDESEYAASRYVPPLKHILSELVNNRLSFEDYPSILPMPESNPSLSTPSARGSVRSSRKSR-PSGAINLSGGRSIAFMMGGMSFSELRIARDVMEKEMREVIVGSTAFISAKDFV 577          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|1210519029|dbj|GAX22027.1| (syntaxin-binding protein 1 [Fistulifera solaris])

HSP 1 Score: 429.098 bits (1102), Expect = 4.815e-139
Identity = 224/639 (35.05%), Postives = 371/639 (58.06%), Query Frame = 0
Query:   17 FREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHG---QTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETK---ALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNV----QKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGKPIAR--------------SLRKHE--KGRLGKQ------------PATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAV 617
             R +VQ R+++DV  +A+    GW V+++DD ++RV+S+ VGMYD+ME ++T++E L+K R P P+M  +Y++ P+ DS++ +L+DF   K     AV L+FL ++ D L+ ++      L+R++   EIN++FLA E  +F  DM +     +  +   A   ++ ++LV +C  LNEYPH+R+ Q S + + LA +    ++DFVA   +WWYHG   +     +ER TLL+LDRA+D LTPL+H+  +Q MV + LP++ D +TF+ E     ++T+    LL+E D LWVE R  HIA+V+  + ER +E ++++AG+    K   D  M+  ++   +K LPEY+E+  KL  +  +  + M   +++ +++++ LEQTLATG D DG + K   ++ + E ++M ++    ++++++RLI I  I+Q G+ + DRR+L+ AA LTR+D   L  LE LG+++     + K   +SL+G  S+      +   EY+A+RY   +K ++E    G LS E YPS++PMP        R              S RK      R  K              A F GGR +VF+ GG+ YSE+R A EVM+    E++IG T++++P  Y+  L ++
Sbjct:   27 LRSLVQERILEDVFVSASNKYPGWKVLILDDLSMRVISSAVGMYDIMERKITIVESLNKKRAPFPDMGAVYVLEPSSDSISKLLQDFEKGKVLYGNAVFLYFLGRLPDNLLDQIKGCKQLLKRLKALSEINIDFLAKEERAFSFDMRDCFGSFYLRKAANAEVRKIADRLVTVCGTLNEYPHIRYKQSSTMSSSLAHIFHRKMDDFVAQNPNWWYHGGPKKGAGAAKERGTLLLLDRADDALTPLMHDFYYQSMVRDLLPMDGDRITFKDESVDDPNKTEDKDVLLDEKDKLWVEIRGFHIAQVIHTLSERIREMVNSSAGSAFGGKSKGD--MTLAQMAAAMKALPEYKEVMSKLTQHMHIAHECMDALKKDKLMDLANLEQTLATGTDEDGNAPKLPDLIDAAEDLIMNMK----NVKDRLRLILIITISQGGLRQQDRRRLMNAAELTRKDMRTLNSLEVLGLSLFASPAEKKGGLASLFGRGSSAG----EDDEEYAATRYKPRIKAVLESLANGTLSLEEYPSVMPMPESAAAASKRGSTARGAATRRGVESARKKSDTSSRWNKSSGSDRGSASSGTSAAFGGGRCIVFMLGGLAYSEIRVAREVMKSESTEIIIGSTAFVSPKEYMNELESL 655          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|298705544|emb|CBJ28811.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 414.461 bits (1064), Expect = 7.017e-134
Identity = 235/616 (38.15%), Postives = 355/616 (57.63%), Query Frame = 0
Query:   37 SRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPG------------LFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGAR---LASLVQDGLNDFVAAQEDWWYHGQTGH-TDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSL--------ESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKT------KNHSSSLWGSKSTKA----KRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQE-GKPIARSLRKHEKGRLGKQPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAV 617
            S  W VMV+D  A RV+S++VGMYD+ME  VT++E L K RQP  EM+ +YLV PT +SV  I +DF++P    Y  VHLFFL +V   L+Q +   P  + R++TFKEINM+FL  E  S+HLDM  SL G            L+  R    V   +  +LV LC  L E+PHVRF      G R   +A   Q  + + V+    W + GQ    +D  RATLL+LDRA+DPL+PL+HE T+Q +V + L ++D  VT+ +E   G  + +ALL +SDALW EFRH+HI KV+  +G R ++ + +NAGA    K G   +MS +++    + LPE++E++ K+  +  L+ D M + +R+ +L+   LEQT+A G D  GRS K   +L+            +L  L+++    E K+RL+ IF   Q   T  ++ ++V AA L       L  LE L              + SS+  G+K  K+      + ++ ++++  RY  PLK+ + + + G LS +A+PS+LPMP +   K + RS+RK      G++  T+SG R +VFV GGV +SE+RAAYE M++H +EV++GGT++L P  +++ L  +
Sbjct:   13 SDAWRVMVLDARATRVISSVVGMYDIMEGHVTVVEDLHKARQPFREMEGVYLVAPTAESVEAIKRDFSSPADALYSKVHLFFLERVPPDLLQSIKQCPTLVSRLKTFKEINMDFLVPEMQSYHLDMG-SLSGAGEVEAAAHFRELYGGRGQGRVMASIAQRLVTLCATLGEFPHVRFAADG--GGRTEGVARTFQANMEELVSNSPTWTFRGQDSRASDGGRATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIKDGRVTYTTETGRGKQKKEALLTDSDALWAEFRHKHIGKVLTDLGNRFRDLVASNAGAAALVK-GEGRQMSVEQMAKATRGLPEFQELSKKMSQHVRLSQDCMDKLERKNLLQAGALEQTMALGTDDLGRSRKCKDILEGWVIEGGDVQPGLLEILKASRTPEEMKLRLVGIFNATQTKATSDEKTRVVRAAQLASTSVPTLTGLERLAAAAGVGGGVGGFSDPSSAKKGNKLFKSLGFGASKQEETNDFTHMRYKTPLKETLAKMLSGTLSFDAFPSLLPMPQEAPKKAVGRSIRKGG----GQEATTYSGARVIVFVIGGVCHSEMRAAYEAMQEHGREVIVGGTTFLPPAGFLQGLSGL 620          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|397565683|gb|EJK44728.1| (hypothetical protein THAOC_36711 [Thalassiosira oceanica])

HSP 1 Score: 409.453 bits (1051), Expect = 1.698e-131
Identity = 228/642 (35.51%), Postives = 376/642 (58.57%), Query Frame = 0
Query:   16 NFREVVQRRLMQDVIEAAAGLSRG--WMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFA----NPKKPRYG-AVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDM-PESLPGLFK-------ARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQS----EGKGGGHET----KALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGI-TEVDRRQLVGAAGLTREDQDALIHLEALGVN-VQKT-KNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMP-----SQEGKPIARSLRK--HEKGRLGKQPATFS-------GGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAV 617
            + R++V+  L+ DV + ++ +  G  WMV+V+D  ALRV+S+ +GMY++MEH VT++E L K R P  +  V+YLV P   S++ I+ D+     N K P YG +V L+FL  + D L   +      ++RV+  +E+N++FL  E+ +FH DM P     ++        +   + + + +++KLV +C  LNEYPHVRF   + L   LA+L Q  +N+F+ + + WW++G   + + ER+TLLILDR +D L+PL+HE T++ MV++ LP++D+ +T+ S      K G  ET     ALLN++D +WVE + +HIA+V++ +  + ++ ++++ G+ L+    +   +S  ++   LK LPEYRE+  KL  +  +    M  F ++G+LE++ELEQTLATG   +GR+ K   +L  +         + +    ++R++AI I++Q G+ ++ D ++L+  A L+ ++  AL +LE LG   VQK  +N   +  G K   +    +  SEYS+SRY CPLK +++    G LS E YPS++P+P     +Q       S+RK      R G + ++ S       G R LVFV GG+ YSELRAA EVM+    E+V G T ++TP+ +I  L ++
Sbjct:   24 SLRDIVKSHLLDDVFQKSS-VKNGNQWMVLVVDPEALRVISSSIGMYNLMEHNVTIVEDLMKRRAPFRDQAVLYLVEPNRSSIDRIVNDWTPSKENKKGPLYGNSVFLYFLGPLPDELFGLIKQCKELVKRVKVLQEVNVDFLTKESGAFHFDMKPPRFQNIYSELYVRRSSTGLSPLHDRMMSKLVTVCATLNEYPHVRFPSNNELCKSLANLFQQKINEFLGSNKSWWFNGDGTNPNTERSTLLILDRKDDCLSPLVHELTYEAMVNDLLPIDDEKITYDSVTAGTSKEGTGETTTRMDALLNDNDEVWVELKGKHIAEVIQTLSTKIRDIVNSSTGSALSGSKASGKALSINQMAKALKALPEYREIMSKLSQHMQIAHQCMDAFNKQGLLELTELEQTLATGKTDEGRTPKLKALLGQVVEEFRKRNDSAM----RLRILAIAIVSQRGLSSQSDLKKLLNEANLSEDEISALRNLEKLGCPLVQKDGQNSKYARIGGKKASSFSEAENESEYSSSRYACPLKSILQDATSGNLSVEEYPSVMPLPDDNALNQSAMKKVSSVRKAASASNRWGSKTSSSSSSGKRKVGSRQLVFVVGGMCYSELRAAREVMDASGTEIVTGTTKFITPSEFISNLTSM 660          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|1072233983|gb|OEU18713.1| (Sec1-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 409.068 bits (1050), Expect = 2.507e-130
Identity = 215/641 (33.54%), Postives = 377/641 (58.81%), Query Frame = 0
Query:   13 PPKNFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYG-AVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTG----HTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGG---GHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSSLWGSKSTK-----------AKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPS-----------------QEGKPIARSLRKHEKGRLGKQPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAV 617
            P ++  EVV++R   DV ++AA    GW V+++D+  ++V+SA VGMYD+ME +V+++E L + R P  +M  IY++ PT +SV  +L D+A+  K  YG AV L+FL  +   LM ++      ++R++   E+N++FL  E  SF LDM +    L +    +  + ++  KLV LC  LNEYP++RF QKS + + LA L +  ++++V +   WWYHG       +++R+R+TLL+LDR+ D LTPL+H+ T+Q MV++ L +E D +T+++E +       +   LLN+ D LWVE R  HIA+V+E +  R ++ ++++  + L +K G++  MS  +L   +K+LPEYRE+  KL  +  +  D M +F + G+L++S++EQTLATG D D R+VK  + +   ES L+ ++      ++++RL+ I  I+Q G++  D+ +L+ AA L R++   L  L  + ++     N+++S   +K  K           +    ++ SEY++SRYV PLK +++  V  +L  + YPS++PMP+                 ++G        K +     K   ++ GGR+++F+ GG+++SELR   +VME+  +E++ G T +++P  ++  L+ +
Sbjct:   99 PQQSLMEVVRKRFTDDVFQSAANAHPGWKVLIVDEPGMKVISAAVGMYDIMEQQVSIVESLERKRAPFKDMAAIYILAPTNESVQKLLDDYADKTKILYGPAVFLYFLGPIPKQLMHQIKQCKQLVKRLKAVAEVNVDFLMREQRSFVLDMNDPFASLIRGGGMSPTEMKMAEKLVTLCATLNEYPYIRFKQKSKVCSSLADLFKMKMDEYVGSNPAWWYHGSGNCPAKNSERDRSTLLLLDRSSDCLTPLMHDFTYQSMVNDLLTIEGDKITYKAESQENPSIKEDKDVLLNDKDKLWVEMRGNHIAQVIEVLSGRIQDVVNSSTNSALRKKSGSN--MSLSQLASAMKELPEYREVMSKLGQHMHIAHDCMDKFNKLGLLDLSDVEQTLATGKDDDDRTVKTAETISRCESALIRIQDP----DDRLRLMLIATISQGGLSRGDKDRLLRAAQLGRKELQTLESLSKIAMD--SINNNAASPTAAKDGKKGFLGRSSSDDSVDDDEEESEYASSRYVPPLKGILKALVSNQLDFQEYPSVIPMPASSASSSVGVTSSARSSRKKGGASTDKWGKSKSSGDSKGKGSYEGGRNIMFMVGGLSFSELRVTRDVMEKQSREIIAGSTKFVSPEEFMDDLKTL 731          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|1210531927|dbj|GAX09355.1| (syntaxin-binding protein 1 [Fistulifera solaris])

HSP 1 Score: 402.134 bits (1032), Expect = 2.595e-129
Identity = 213/606 (35.15%), Postives = 349/606 (57.59%), Query Frame = 0
Query:   50 LRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHG---QTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETK---ALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNV----QKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGKPIAR--------------SLRKHE--KGRLGKQP------------ATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAV 617
            +RV+S+ VGMYD+ME ++T++E L+K R P P+M  +Y++ P+ DS++ +L+DF   K     AV L+FL ++ D L+ ++      L+R++   EIN++FLA E  +F  DM +     +  +   A   ++ ++LV +C  LNEYPH+R+ Q S + + LA +    ++DFVA   +WWYHG   +     +ER TLL+LDRA+D LTPL+H+  +Q MV + LP++ D +TF+ E     ++T+    LL+E D LWVE R  HIA+V+  + ER +E ++++AG+    K   D  M+  ++   +K LPEY+E+  KL  +  +  + M   +++ +++++ LEQTLATG D DG + K   ++ + E ++M ++    ++++++RLI I  I+Q G+ + DRR+L+ AA LTR+D   L  LE LG+++     + K   +SL+G  S+      +   EY+A+RY   +K ++E    G LS E YPS+LPMP        R              S RK      R  K              A F GGR +VF+ GG+ YSE+R A EVM+    E++IG T++++P  Y+  L ++
Sbjct:    1 MRVISSAVGMYDIMERKITIVESLNKKRAPFPDMGAVYVLEPSSDSISKLLQDFDKGKVLYGNAVFLYFLGRLPDNLLDQIKGCKQLLKRLKALAEINIDFLAKEERAFSFDMRDCFGSFYLRKAANAEVRKIADRLVTVCGTLNEYPHIRYKQSSTMSSSLAQIFHRKMDDFVAQNPNWWYHGGPKKGAGAAKERGTLLLLDRADDALTPLMHDFYYQSMVRDLLPMDGDRITFKDESVDDPNKTEDKDVLLDEKDKLWVEIRGFHIAQVIHTLSERIREMVNSSAGSAFGGKSKGD--MTLAQMAAAMKALPEYKEVMSKLTQHMHIAHECMDALKKDKLMDLANLEQTLATGTDEDGNAPKLPDLIDAAEDLIMNMK----NVKDRLRLILIITISQGGLRQQDRRRLMNAAELTRKDMRTLNSLEVLGLSLFASPAEKKGGLASLFGRGSSAG----EDDEEYAATRYKPRIKAVLESLANGTLSLEEYPSVLPMPESAAAASKRGSTARGAATRRGVESARKKSDTSSRWNKSSVSDRGSATSGTGAAFGGGRCIVFMLGGLAYSEIRVAREVMKSESTEIIIGSTAFVSPKEYMNELESL 596          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|698810262|ref|XP_009838160.1| (hypothetical protein H257_12589 [Aphanomyces astaci] >gi|574106963|gb|ETV72478.1| hypothetical protein H257_12589 [Aphanomyces astaci])

HSP 1 Score: 393.275 bits (1009), Expect = 5.081e-125
Identity = 218/640 (34.06%), Postives = 363/640 (56.72%), Query Frame = 0
Query:    4 LSRRGAENSPPKNFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPNFLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLFKARPDAAVQEEVVN----KLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLP---VEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQK---TKNHSSSLWGSK--STKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSILPMPSQEGKPIAR----SLRKHEKGRLGK--------QPATFSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAVKN 619
            L+    E++   N R +VQ  L+  +I+  +  S GW+V+V+DD    + + ++ M D+ E  V+++E L   RQP PEM VIY ++P   S++ ++ DF+  + P YGAVHL+F S+++  ++ +L   P+ L RV+T KE+N+++LA E  +F LDMP ++  L+    + +  + ++     KLV LC  L+EYP+VRF         LA L Q  +ND+VA    + Y  Q       R+TLL ++R++D ++PL+HE T+Q MV++ L    ++ D +++ ++   G    +ALLNE+D LW E RH HIA+V + IG+R      +NAG  LT K G    ++  +L   L++LPE+R+   KL  +  L    +  F +  +L +S LEQ++ATGVD  G+ +K  K+++ +E +   L    +   +K RL+AIF+I  + + +V+R++L   A L      AL +++ LGV + K     N +     +   +T AK+ T  +SEY+ SRY   LK  +E+ ++  L    +P ++  PS    P ++    S+RK    +  K        + A F G + +VFVAGG TYSELR+ YE+ ++ K+++VIG TS+L P  Y+  L  +++
Sbjct:   10 LTTMSKESTASHNLRTLVQHNLLDKMIKQTSLASHGWVVLVLDDTTTHLANTVIRMTDLTERGVSIVERLELARQPFPEMAVIYFISPVATSLDKVVADFSKAETPMYGAVHLYFNSRIDGAVLAKLKTCPSLLSRVKTLKEVNLDYLAIEQAAFSLDMPHAMHTLYSPLSNPSTVDPILQSISAKLVTLCATLDEYPYVRFRAGQHKMETLARLFQTKMNDYVAGNSAFAYCPQ-------RSTLLFMERSQDQMSPLMHECTYQAMVYDLLDGNGLDGDAISYPADTANGTVTKQALLNENDPLWCELRHTHIAEVSQDIGQRMAALSASNAGTSLTGKGGKAPDVA--QLAAALRELPEFRDTLSKLSQHLYLAGKTLDVFTKTDLLGVSTLEQSMATGVDETGKKIKLPKVMKDMEDL---LRDPKVPNSDKARLLAIFVITNDAVKDVERKKLFQLANLPAITDKALQNMKYLGVFMSKISVVANATGHALTTDDLTTAAKKAT--SSEYATSRYEPKLKGWMEKILKKTLDATEFPYVISPPSGSNSPTSKKEPVSMRKKVAAKFNKGGESPTGGKDAAFVGEKLIVFVAGGATYSELRSVYELRDKEKRDIVIGATSFLRPKTYLDNLVTIED 635          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|567957598|gb|ETK83197.1| (hypothetical protein L915_11536 [Phytophthora parasitica] >gi|567986266|gb|ETL36591.1| hypothetical protein L916_11452 [Phytophthora parasitica] >gi|568045952|gb|ETM43078.1| hypothetical protein L914_11370 [Phytophthora parasitica] >gi|570323852|gb|ETO71800.1| hypothetical protein F444_11918 [Phytophthora parasitica P1976] >gi|570980304|gb|ETP41010.1| hypothetical protein F442_11744 [Phytophthora parasitica P10297])

HSP 1 Score: 389.423 bits (999), Expect = 1.129e-123
Identity = 218/620 (35.16%), Postives = 348/620 (56.13%), Query Frame = 0
Query:   16 NFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPN-FLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLF----KARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSIL------PMPSQEGKPIARSLRKHEKGRLGKQPAT-----FSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAVKN 619
            + R+VVQ +++  +++    L+RGW+VMV+DD A R ++ +  M ++ +  V+L+E +  +RQP PEM+V+Y + PT  +V  + +DF +P KP+Y  V+L+FL    +  +  L   P   LQR++  +E+N++FLA E  +F   + E+   L+    K      + E V NKLV++C  L EYP+VR+         +A + Q  +ND++A    + Y  +       R TLL +DR +D +TPL+HE TFQ M ++ L V DD +T+++E   G     A LNE+D  WVEFRH HIAKV  +IG+R      +NAG  L +   TD     Q +   L++LPEYREM GKL  +  L    M  F   G+LE S +EQTLATGV+  G+ +K   + + LE +    +   L+  ++ R+  +F + Q+ + E +R +++ AA L+++ +  L ++  L    +  K + +SL  S+  K   +  +A EYS +RY   +K ++   ++  LS   YP I+      P  S   KP   SLRK   G+   Q A      FSG + +VF++GG TYSELR+ YEV  + K++V +G TS++ P A+I+ L  +K+
Sbjct:   19 DLRKVVQDKVLIQMVKHVTQLTRGWVVMVVDDDATRSLTQVARMSELTDCGVSLLERMELERQPFPEMNVVYFIAPTAANVRRLARDFEDPNKPKYNDVYLYFLYHAGEEALSELKNAPQALLQRLKALQEVNVDFLAVEKCAFSFGIHEAFHTLYSPAVKKSESEKLMETVSNKLVSVCATLEEYPYVRYQAGHTRMETMAQMFQSKMNDYLAQNSTFSYAPK-------RGTLLFIDRGQDMVTPLMHESTFQAMTYDLLGVMDDHITYEAETNSGTTTKTAFLNENDKQWVEFRHTHIAKVSTEIGKRMTALSASNAGTSLGRGKSTD----LQAMAAGLRELPEYREMLGKLSQHLFLAGKAMDIFTSTGLLEASNIEQTLATGVEESGKKLKHSAVAKQLEDL---FKDPKLTENDRFRVAVVFALTQDTMKEAERNKVMQAAKLSKKHETILENM-VLVAGSELYKQNGNSLISSEDLKLATKKAEAVEYSNARYDPKIKAIVASALKRTLSESEYPYIITPPPQSPTASDSKKPGPVSLRKKMAGKGKAQEAAVESEQFSGEKMIVFMSGGATYSELRSIYEVRSEEKRDVFLGTTSFVAPPAFIESLATLKD 623          
BLAST of EWM28108.1 vs. NCBI_GenBank
Match: gi|570947640|gb|ETP12897.1| (hypothetical protein F441_11790 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 389.423 bits (999), Expect = 1.312e-123
Identity = 218/620 (35.16%), Postives = 348/620 (56.13%), Query Frame = 0
Query:   16 NFREVVQRRLMQDVIEAAAGLSRGWMVMVIDDAALRVVSALVGMYDVMEHRVTLIELLSKDRQPLPEMDVIYLVTPTPDSVNLILKDFANPKKPRYGAVHLFFLSKVNDMLMQRLAAVPN-FLQRVRTFKEINMNFLATEAFSFHLDMPESLPGLF----KARPDAAVQEEVVNKLVALCVALNEYPHVRFNQKSVLGARLASLVQDGLNDFVAAQEDWWYHGQTGHTDRERATLLILDRAEDPLTPLLHEHTFQPMVHEFLPVEDDMVTFQSEGKGGGHETKALLNESDALWVEFRHQHIAKVMEQIGERTKEYIHANAGAELTQKLGTDAKMSAQELGLILKQLPEYREMTGKLWMYYSLTTDLMARFQREGILEISELEQTLATGVDSDGRSVKEDKMLQSLESMLMGLESTGLSLENKMRLIAIFIIAQEGITEVDRRQLVGAAGLTREDQDALIHLEALGVNVQKTKNHSSSLWGSKSTKAKRRTDQASEYSASRYVCPLKDLIEQTVQGELSTEAYPSIL------PMPSQEGKPIARSLRKHEKGRLGKQPAT-----FSGGRSLVFVAGGVTYSELRAAYEVMEQHKKEVVIGGTSYLTPNAYIKLLRAVKN 619
            + R+VVQ +++  +++    L+RGW+VMV+DD A R ++ +  M ++ +  V+L+E +  +RQP PEM+V+Y + PT  +V  + +DF +P KP+Y  V+L+FL    +  +  L   P   LQR++  +E+N++FLA E  +F   + E+   L+    K      + E V NKLV++C  L EYP+VR+         +A + Q  +ND++A    + Y  +       R TLL +DR +D +TPL+HE TFQ M ++ L V DD +T+++E   G     A LNE+D  WVEFRH HIAKV  +IG+R      +NAG  L +   TD     Q +   L++LPEYREM GKL  +  L    M  F   G+LE S +EQTLATGV+  G+ +K   + + LE +    +   L+  ++ R+  +F + Q+ + E +R +++ AA L+++ +  L ++  L    +  K + +SL  S+  K   +  +A EYS +RY   +K ++   ++  LS   YP I+      P  S   KP   SLRK   G+   Q A      FSG + +VF++GG TYSELR+ YEV  + K++V +G TS++ P A+I+ L  +K+
Sbjct:   19 DLRKVVQDKVLIQMVKHVTQLTRGWVVMVVDDDATRSLTQVARMSELTDCGVSLLERMELERQPFPEMNVVYFIAPTAANVRRLARDFEDPNKPKYNDVYLYFLYHAGEEALSELKNAPQALLQRLKALQEVNVDFLAVEKCAFSFGIHEAFHTLYSPAVKKSESEKLMETVSNKLVSVCATLEEYPYVRYQAGHTRMETMAQMFQSKMNDYLAQNSTFSYAPK-------RGTLLFIDRGQDMVTPLMHESTFQAMTYDLLGVMDDHITYEAETNSGTTTKTAFLNENDKQWVEFRHTHIAKVSTEIGKRMTALSASNAGTSLGRGKSTD----LQAMAAGLRELPEYREMLGKLSQHLFLAGKAMDIFTSTGLLEASNIEQTLATGVEESGKKLKHSAVAKQLEDL---FKDPKLTENDRFRVAVVFALTQDTMKEAERNKVMQAAKLSKKHETILENM-VLVAGSELYKQNGNSLISSEDLKLATKKAEAVEYSNARYDPKIKAIVASALKRTLSESEYPYIITPPPQSPTASDSKKPGPVSLRKKMAGKGKAQEAAVESEQFSGEKMIVFLSGGATYSELRSIYEVRSEEKRDVFLGTTSFVAPPAFIESLATLKD 623          
The following BLAST results are available for this feature:
BLAST of EWM28108.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110452|gb|EWM28108.1|0.000e+0100.00sec1-like family protein [Nannochloropsis gaditana... [more]
gi|219118292|ref|XP_002179924.1|3.425e-14439.69predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1210519029|dbj|GAX22027.1|4.815e-13935.05syntaxin-binding protein 1 [Fistulifera solaris][more]
gi|298705544|emb|CBJ28811.1|7.017e-13438.15conserved unknown protein [Ectocarpus siliculosus][more]
gi|397565683|gb|EJK44728.1|1.698e-13135.51hypothetical protein THAOC_36711 [Thalassiosira oc... [more]
gi|1072233983|gb|OEU18713.1|2.507e-13033.54Sec1-like protein [Fragilariopsis cylindrus CCMP11... [more]
gi|1210531927|dbj|GAX09355.1|2.595e-12935.15syntaxin-binding protein 1 [Fistulifera solaris][more]
gi|698810262|ref|XP_009838160.1|5.081e-12534.06hypothetical protein H257_12589 [Aphanomyces astac... [more]
gi|567957598|gb|ETK83197.1|1.129e-12335.16hypothetical protein L915_11536 [Phytophthora para... [more]
gi|570947640|gb|ETP12897.1|1.312e-12335.16hypothetical protein F441_11790 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2548rna2548Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications