EWM28133.1, cds2531 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|585110477|gb|EWM28133.1| (3-hydroxyisobutyrate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MRAQSQSKMAVPMITRRLRTIKLSVHTLQISYSAATSAPMARTRTRLEVSKARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVSQDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLLATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 MRAQSQSKMAVPMITRRLRTIKLSVHTLQISYSAATSAPMARTRTRLEVSKARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVSQDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLLATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG Sbjct: 1 MRAQSQSKMAVPMITRRLRTIKLSVHTLQISYSAATSAPMARTRTRLEVSKARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVSQDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLLATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|922854995|gb|KOO23484.1| (3-hydroxyisobutyrate dehydrogenase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 185.267 bits (469), Expect = 1.864e-53 Identity = 105/221 (47.51%), Postives = 140/221 (63.35%), Query Frame = 0 Query: 56 TLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVS----QDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLLATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 +ALIG G MG M NF+ AGY + VYD N + A+GA + A +VTM+PND VL V+ I+ + PG++H+SCSTV P TSR LA +HA +VGAP+FAR +GV + A F +GG + A+ A+P+L A + +FEF D GAGNVVK+CGN++IAS I++ EAL+LAE GL+R VM ML+ TIFDCLIY+G Sbjct: 14 NVALIGLGAMGLPMLDNFIAAGYKMRVYD-VNASAMKEAAAKGADGAASPAEAAAGADAVVTMVPNDSVLRKVTCAPETGILHAMRPGSVHVSCSTVHPDTSRELARLHATAGSAFVGAPIFARADGVARRLASFCVGG-EAGAIAMARPLLEANANGIFEFGD-DPGAGNVVKICGNYMIASTIQTCAEALSLAEKSGLDRQAVMRMLNTTIFDCLIYRG 231
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|570319411|gb|ETO67359.1| (hypothetical protein F444_15716 [Phytophthora parasitica P1976]) HSP 1 Score: 177.563 bits (449), Expect = 3.782e-50 Identity = 98/232 (42.24%), Postives = 134/232 (57.76%), Query Frame = 0 Query: 50 SKARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVS--------QDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 S A + IG G MGF M N LKAG ++ +D N N RL GA + + +Q I ++LP DE++ V+ ++ T++PGALH+ CST+ P+TSR+L H YV AP+FARP+G+E QA FV+ G+D A++ A L T V FS D+GA N VKL GNFLIASAIES+ EAL+L E G++RV+ M S T + +I+KG Sbjct: 19 SAASSNAVGFIGLGNMGFPMAHNLLKAGVDVLCFDT-NRANIDRLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGQVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 249
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|567953132|gb|ETK78791.1| (hypothetical protein L915_15280 [Phytophthora parasitica] >gi|567981785|gb|ETL32221.1| hypothetical protein L916_15172 [Phytophthora parasitica] >gi|568011300|gb|ETL85478.1| hypothetical protein L917_15001 [Phytophthora parasitica] >gi|568041203|gb|ETM38622.1| hypothetical protein L914_15135 [Phytophthora parasitica]) HSP 1 Score: 176.792 bits (447), Expect = 6.965e-50 Identity = 98/232 (42.24%), Postives = 134/232 (57.76%), Query Frame = 0 Query: 50 SKARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVS--------QDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 S A + IG G MGF M N LKAG ++ +D N N RL GA + + +Q I ++LP DE++ V+ ++ T++PGALH+ CST+ P+TSR+L H YV AP+FARP+G+E QA FV+ G+D A++ A L T V FS D+GA N VKL GNFLIASAIES+ EAL+L E G++RV+ M S T + +I+KG Sbjct: 19 SAASSNAVGFIGLGNMGFPMAHNLLKAGVDVLCFDT-NRANIDRLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 249
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|675172823|ref|XP_008895296.1| (hypothetical protein PPTG_04760 [Phytophthora parasitica INRA-310] >gi|568104800|gb|ETN19445.1| hypothetical protein PPTG_04760 [Phytophthora parasitica INRA-310]) HSP 1 Score: 175.637 bits (444), Expect = 1.819e-49 Identity = 97/230 (42.17%), Postives = 133/230 (57.83%), Query Frame = 0 Query: 52 ARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVS--------QDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 A + IG G MGF M N LKAG ++ +D N N RL GA + + +Q I ++LP DE++ V+ ++ T++PGALH+ CST+ P+TSR+L H YV AP+FARP+G+E QA FV+ G+D A++ A L T V FS D+GA N VKL GNFLIASAIES+ EAL+L E G++RV+ M S T + +I+KG Sbjct: 20 ASSNAVGFIGLGNMGFPMAHNLLKAGVDVLCFDT-NRANIDRLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 248
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|566015677|gb|ETI38588.1| (hypothetical protein F443_15738 [Phytophthora parasitica P1569] >gi|570943238|gb|ETP08495.1| hypothetical protein F441_15558 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 175.637 bits (444), Expect = 2.003e-49 Identity = 97/230 (42.17%), Postives = 133/230 (57.83%), Query Frame = 0 Query: 52 ARKGTLALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVS--------QDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 A + IG G MGF M N LKAG ++ +D N N RL GA + + +Q I ++LP DE++ V+ ++ T++PGALH+ CST+ P+TSR+L H YV AP+FARP+G+E QA FV+ G+D A++ A L T V FS D+GA N VKL GNFLIASAIES+ EAL+L E G++RV+ M S T + +I+KG Sbjct: 20 ASSNAVGFIGLGNMGFPMAHNLLKAGVDVLCFDT-NRANIDRLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 248
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|695463627|ref|XP_009538766.1| (hypothetical protein PHYSODRAFT_258132 [Phytophthora sojae] >gi|348666077|gb|EGZ05905.1| hypothetical protein PHYSODRAFT_258132 [Phytophthora sojae]) HSP 1 Score: 168.318 bits (425), Expect = 5.449e-47 Identity = 94/217 (43.32%), Postives = 126/217 (58.06%), Query Frame = 0 Query: 65 MGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIV--------SQDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 MGF M N LKAG ++ +D N N RL GA + + +Q I ++LP DEV+ V ++ L+PGALH+ CST+ P+TSRAL + H YV AP+FARP+G+E QA FV+ G+ A++ A L T V FS D GA + VKLCGNFLIA+AIES+ EALAL E G++RV+ M S T + +I+KG Sbjct: 1 MGFPMAHNLLKAGVDVLCFDA-NRSNVDRLALLGAKPTDSVEQVAAQTNTIFSVLPRDEVVTSVVLGDEAKPGSGLLANLAPGALHVGCSTIHPNTSRALDAKHREVKTRYVAAPIFARPDGMEAMQANFVLSGSAADAVEQASQWLHKCTNGRVAPFSNEDPGAASAVKLCGNFLIATAIESMAEALALLEANGVDRVQAMQFYSSTFLNSVIHKG 216
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|1129184689|gb|OLP91220.1| (putative oxidoreductase YfjR [Symbiodinium microadriaticum]) HSP 1 Score: 176.022 bits (445), Expect = 1.864e-46 Identity = 98/219 (44.75%), Postives = 138/219 (63.01%), Query Frame = 0 Query: 57 LALIGCGKMGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVSQDIVPTLSPGA---LHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLLATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 L +G GK+G M N KAG L+++DK ++ + E + + A+++ + LP+D VL+ VS +++P L+ +H+SCSTV+PS SR+L+ + A+AVG+V APVFARP+G+ +A F + G D A P+L T V +F DAGA NVVKL GNFLIA+AIES+ EA ALAE ++R K MS++S TIFDCLIYKG Sbjct: 23 LGFVGLGKIGSGMVTNLTKAGESLIIFDK-SHAAAEAVAGEAVRAATSVAEVAQNAEVVFSALPDDNVLQAVSSELLPALAARGGRPIHVSCSTVSPSISRSLSEAYEARAVGFVSAPVFARPDGMRRGEATFPVSGPDW-AKSRVVPLLQKTALGVHDFGE-DAGAANVVKLGGNFLIAAAIESMAEASALAEGYDVDREKFMSLMSSTIFDCLIYKG 238
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|301115438|ref|XP_002905448.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110237|gb|EEY68289.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 163.696 bits (413), Expect = 2.679e-45 Identity = 92/217 (42.40%), Postives = 123/217 (56.68%), Query Frame = 0 Query: 65 MGFAMGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIV--------SQDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 MGF M N LKAG ++ +D N N RL GA + + +Q I ++LP DE++ V ++ +++PGALH+ CST+ P+TSR L H YV AP+FARP+G+E QA FV+ G+D A++ A L T V FS D GA N VKL GNFLIASAIES+ EAL L E G++RV+ M S T +I+KG Sbjct: 1 MGFPMAHNLLKAGVDVLCFDA-NRANVDRLVLLGAKPAASVEEVAAQTSTIFSVLPRDEIVTSVVIGNETKHGSGLLASMAPGALHVGCSTIHPNTSRTLDIKHLEAKTKYVAAPIFARPDGMEAMQANFVVSGSDASAVEQASQWLHKCTNGRVASFSSEDPGAANAVKLSGNFLIASAIESMAEALTLLEANGVDRVQAMEFYSSTFLKSVIHKG 216
BLAST of EWM28133.1 vs. NCBI_GenBank
Match: gi|970635364|gb|KUF80266.1| (putative oxidoreductase YfjR [Phytophthora nicotianae]) HSP 1 Score: 162.155 bits (409), Expect = 1.008e-44 Identity = 90/213 (42.25%), Postives = 125/213 (58.69%), Query Frame = 0 Query: 69 MGINFLKAGYPLMVYDKYNNENTRRLEAEGASIVKDIRILGSQAQIIVTMLPNDEVLEIVS--------QDIVPTLSPGALHISCSTVAPSTSRALASVHAAKAVGYVGAPVFARPEGVEEKQAFFVMGGTDVRAMKAAKPVLL-ATGSDVFEFSRRDAGAGNVVKLCGNFLIASAIESIGEALALAENQGLNRVKVMSMLSDTIFDCLIYKG 272 M N LKAG ++ +D N N RL GA + + +Q I ++LP DE++ V+ ++ T++PGALH+ CST+ P+TSR+L H YV AP+FARP+G+E QA FV+ G+D A++ A L T V FS D+GA N VKL GNFLIASAIES+ EAL+L E G++RV+ M S T + +I+KG Sbjct: 1 MAHNLLKAGVDVLCFDT-NRANIDRLVVLGAKPAASVEEVAAQTNTIFSVLPRDEIIRSVALGDKGKHGSGLLATMTPGALHVGCSTIHPNTSRSLDVKHREAKTKYVAAPIFARPDGMEAMQANFVVSGSDAAAVEQASQWLHKCTNGRVASFSTEDSGAANAVKLSGNFLIASAIESMAEALSLLEANGVDRVQAMQFYSSTFMNSVIHKG 212 The following BLAST results are available for this feature:
BLAST of EWM28133.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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