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Properties
| Property Name | Value |
|---|
| Product | ferredoxin (2fe-2s) |
| Orig transcript id | gnl|cribi|Naga_100004g160.9218.mrna |
| Orig protein id | gnl|cribi|Naga_100004g160.9218 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:561285..562977 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2517 ID=rna2517|Name=rna2517|organism=Nannochloropsis gaditana|type=mRNA|length=2002bp
TGCCTGGCCGGTCTTATTTGCTCTAGCGGCAACGCTGAGCTTTTTAAAGA
ACGAAGAACCTCGAGGATTGCTGAGGCAGTAAGTTTTTGTTGTGGCCTTC
TCATTGTGATGCCGACTTTTGCCAACATCATGCAGACAGCTTAAATCATA
GGGGAATGTCTTTCGGCAGCGCTGCGCCGAACGCCTTCTCATTTGGAGGA
ACGACATCGACACCTTTTTCGTCGGCCGCTGGAAATACGTCCACCTTTGG
TGCAGCGCCTAGTGTTTCTTCAGCTTTAGGTGCCACTCCCTCATCTATAC
AAACATCGCATGGTGCATCTCCGGGCGCGACAAGCTCAGCAGCGCCACCG
AACGATCAGGGATTCACGGGGGACACTACTTTCTCGTCTTTGCCTCAATA
TATGCAATTGAGGGTGTGGGAGCTGCACAAACTTGTGAGGCAGCACAGAG
AATATGCTGATTCCCTGAACAAATTTACGACGCCAAGTTATAGCTTGGAT
CGTTTCACGAAGAGGCTGAAGCTGGATATATTGCGAGTGCAAAATTCGCA
TGCGGAGATTTCCCTTGTTGCAAGCGAATTGCGAAAGCAAGTCGAGCAAT
TGCGGGGTTTCACTCAGAAGCTCCAAGCAGCAGAAAATGGAGCCCTGCAA
TACGGTACACCAAGAGCGGCCGGTGTGGAAACTTTGCGGCAATCACAACA
AAGTCATGCTAGTATTTTGAAAGAAATAGCGATACAGTGCGAGGCGCGGC
TGCAAGAGTACGACGCACACATTCAGGAGCTTTACCACAAGGTGGTTGCG
AGTCGGACTGTGGGCGGCAGCGATGGATTCGGGGGTCTATCAAGAGAATT
CACTCCTGACCAGTTGGCGACCCTCATTCGACTCCAAAATGATGCACTTC
TCAAAGTGGCTGCCCAGGTTGCTGTTGTACATGAGATGGTCGAGCGGCTG
CGCAGCGAATGGAACTCACGTACAGGTCAAGACCCATTTCAGGAGATGGA
TCGCCTCGCAGCGCAGAATGAAGAACGAAAACGCAAGACCAACCGTTTGA
TGATACGAAGTCCACAAGAGCAACTTCGACAAAGCATTGGCCTGTCGCAA
ACGTCCATCGCCCCTAGTTTCACCTCTCCTCCACTCGCTCAGCCAGCTTC
AAACACTTCGGCTGGTTTCTCTTCCTTTTTACCTTCAACTTCCGCGTCAA
ATACCATGTAAGTGATAAGTTACTAGTCGTGTGCATTGTTATCAAAGTAC
TGATTTTCTTGTTCCTGTAACTTGTAGCACATCAGGGACTGGCGCCGGAA
CATTTAATCCTCTCGCTTATTCTAGTCAAGATGCAGTCGACAGGTCAGAG
AAATCTGCCAAGACAAAAGCACGACGATAAATTAATGCTTAAATGCGCGA
TCTCGAGATAAATTTCGTTTCAAAACCGGTGTATTTGGTTTTCCATTATT
TCTCTGTTTCTTACATATCACTCATTTCGGTTCATCACCACGCCGCGTCC
CACATTCTTTTCCCTCTGCTTCTCGACTGCATGTATGAAGCGCGTATAGA
ATGCTGAGCTTCCATCCTCAAAGGCCATCAATGGCACACAAATGTGAAGT
TTGGTTTGACGTGAATGCACGCATAGCGTTTTCTTCTTTTGTTAAAAGCT
CAATCCGCCTCGTTCTTTACATCCTCGGTATGTGTGGACGTGATGCTGAT
GGACGTGCGTCCAAACGGAAAGAGGGGAAAGGCTACATGGCAACGACGAC
TGTTAATTTGTCCAGTAAGTAAAAAGAACTATCTGACAAAAGAGAAAGAT
ATTTACTTGTCAGCTACTCCTATAAAACTGAGCTCTTTGCAACATACGTT
CTCCATTTTGTCCTCAACCGCATGCGACGGGTGTGAAGATATCTCCCAAG
GAAATTGATGACAAAGGGAGGCATTTCCATGATGTAGGGATCCCTCCCTG
AGACATGAAGGCTCACAGCCCAAAAATCAAAGAAGAGATTTAAAGCAAGA
GA back to topprotein sequence of rna2517 >rna2517-protein ID=rna2517-protein|Name=rna2517|organism=Nannochloropsis gaditana|type=polypeptide|length=172bp
MHSLALTLLACFIFSIAQAFVPCVPGLRAKNAQRVGAINVVPLELEGQLD
PTKTWDVKMTYKGETKVLTVSEDTCILEAAEKEWDVPCSCRNGICTTCAG
RVIANPDSKKEAIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYE
SQYGQYEKKATTEQKSKFNVFG back to topmRNA from alignment at CM002459.1:561285..562977+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2517 ID=rna2517|Name=rna2517|organism=Nannochloropsis gaditana|type=mRNA|length=1693bp|location=Sequence derived from alignment at CM002459.1:561285..562977+ (Nannochloropsis gaditana)
ACTCAGTCTTGATAAGCGAGAAGAATCTGCAGAAGTCGACAATCATCCTC
ATCAGACACATCACGGGTGAACTAACTTACCACTGTAACCGCACAGGTAG
CACTAACAGCTTACGCATAACCGGGGGGGGACAAAGATGCATAGTTTGGC
TTTAACTTTGCTTGCATGCTTTATTTTCAGTATTGCCCAGGCCTTTGTGC
CATGCGTGCCCGGTTTAAGAGCTAAAAATGCGCAGAGGTGGGTCCTTGAC
AGTGTGACACGTTAGGAAAGCTACTGTGCAGGTCACATGCGTGCTCACGA
GTCTTCGCTTCGCTTCGTCTAATCCAAATGACAGAGTTGGCGCAATTAAT
GTAGTACCTCTTGAGCTCGAAGGTCAACTTGACCCGACCAAGTAAGTGTC
TCGGCTTCAGCGGTAGCGCAAAGGGAGAGATACATGGTCTTCCTCTGGCC
CCTACAAGATGGATGATTTCTGCATACAAAAATGACGTTAGAATGCTGAT
TTCATTTATGTGTATGAGAGAAGAAAACATGCAACTCTGCATCGAAGGGT
GCGATTTTTTGTAGCAATTGCCTTTCAAAGACACAAAAAGTACTGTTTTC
AAAATAGCGCGATTCACTGTGACTATATCAGCGCCCCCCTCTGTGGTCGT
GATTGTGTGCGCTAACGTGCATAAAAACATTGGCGCAGGACTTGGGATGT
CAAAATGACGTACAAAGGAGAGACCAAGGTGCTCACGGTATCTGAAGACA
CCTGCATCTTGGAGGCTGCAGAGAAGGTAGGGTGCTCGAAAGGTGTGATG
TCGGGGCAATCTCTATTGGCTGTCCTCTAACAATCCTAAGCGATCTCTTC
ATTGATTTATGTTCTGCGCAGGAGATTCGATGTTACAATTCACGAACATT
CTCTTTTTTAAATACCCAATGTAAGGAATGGGACGTGCCTTGCTCATGCC
GGAATGGTATCTGTACAACGTGTGCGGGACGTGTAATAGCGAACCCGGAC
TCAAAAAAGGTAAGGCGAAAGGCTTTTTGTAAACCCCGTATTCTTGCTCC
GCATGCCTTTGTCAGCAAATCTCCAATGTGTGTTTAAAAACCTATGTTCC
AACCTATCTCACGGTTCTCAATTTTTTCGACAGGAGGCAATTCACGGCCT
TTCCGCTGAGCAGTCGAAGAATGGATTTGTCCTGACTTGTCAGACCCATC
CTTGTGGACCGGGTCTGGAGGTAGAGTTGGGCATGTACGACACGGTGTAT
GAATCGCAGTACGGCCAATATGAGAAGAAGGTAAATGTGTCGTTGGTGTG
TACATGATTGCTCTGGAATGTATATCATACTCCATTTGCTTGATGAAAGA
CAGTTGTAAAGTATGGGTTGTGTCACGTACAAATACTATCTTATTTTTTC
GCCATGTACTCTTCAAATACAGGCCACCACGGAGCAGAAAAGCAAGTTCA
ACGTATTTGGCTAGGCTTGTCAAAGTATATGACTGATTACAGGACTCGCT
TTCGAGTCATCGCTATGAATGGACGCTCAAACGAGGTAGATGTGACGGAA
AGACGGTAGGATCACAATGAGCTTTCGAAAGACTTTCGAGCCAGCGAGAG
AACTACGTCCAGGTGTCCCACGATCGACCCATTATGCGTCGAGGCACAAT
CACATGAAGTGGCAAAATTAATTTGAATGCTACCAAGCAACCC back to topCoding sequence (CDS) from alignment at CM002459.1:561285..562977+ >rna2517 ID=rna2517|Name=rna2517|organism=Nannochloropsis gaditana|type=CDS|length=3114bp|location=Sequence derived from alignment at CM002459.1:561285..562977+ (Nannochloropsis gaditana)
ATGCATAGTTTGGCTTTAACTTTGCTTGCATGCTTTATTTTCAGTATTGC
CCAGGCCTTTGTGCCATGCGTGCCCGGTTTAAGAGCTAAAAATGCGCAGA
GAGTTGGCGCAATTAATGTAGTACCTCTTGAGCTCGAAGGTCAACTTGAC
CCGACCAAGACTTGGGATGTCAAAATGACGTACAAAGGAGAGACCAAGGT
GCTCACGGTATCTGAAGACACCTGCATCTTGGAGGCTGCAGAGAAGGAAT
GGGACGTGCCTTGCTCATGCCGGAATGGTATCTGTACAACGTGTGCGGGA
CGTGTAATAGCGAACCCGGACTCAAAAAAGGAGGCAATTCACGGCCTTTC
CGCTGAGCAGTCGAAGAATGGATTTGTCCTGACTTGTCAGACCCATCCTT
GTGGACCGGGTCTGGAGGTAGAGTTGGGCATGTACGACACGGTGTATGAA
TCGCAGTACGGCCAATATGAGAAGAAGGCCACCACGGAGCAGAAAAGCAA
GTTCAACGTATTTGGCTAGATGCATAGTTTGGCTTTAACTTTGCTTGCAT
GCTTTATTTTCAGTATTGCCCAGGCCTTTGTGCCATGCGTGCCCGGTTTA
AGAGCTAAAAATGCGCAGAGAGTTGGCGCAATTAATGTAGTACCTCTTGA
GCTCGAAGGTCAACTTGACCCGACCAAGACTTGGGATGTCAAAATGACGT
ACAAAGGAGAGACCAAGGTGCTCACGGTATCTGAAGACACCTGCATCTTG
GAGGCTGCAGAGAAGGAATGGGACGTGCCTTGCTCATGCCGGAATGGTAT
CTGTACAACGTGTGCGGGACGTGTAATAGCGAACCCGGACTCAAAAAAGG
AGGCAATTCACGGCCTTTCCGCTGAGCAGTCGAAGAATGGATTTGTCCTG
ACTTGTCAGACCCATCCTTGTGGACCGGGTCTGGAGGTAGAGTTGGGCAT
GTACGACACGGTGTATGAATCGCAGTACGGCCAATATGAGAAGAAGGCCA
CCACGGAGCAGAAAAGCAAGTTCAACGTATTTGGCTAGATGCATAGTTTG
GCTTTAACTTTGCTTGCATGCTTTATTTTCAGTATTGCCCAGGCCTTTGT
GCCATGCGTGCCCGGTTTAAGAGCTAAAAATGCGCAGAGAGTTGGCGCAA
TTAATGTAGTACCTCTTGAGCTCGAAGGTCAACTTGACCCGACCAAGACT
TGGGATGTCAAAATGACGTACAAAGGAGAGACCAAGGTGCTCACGGTATC
TGAAGACACCTGCATCTTGGAGGCTGCAGAGAAGGAATGGGACGTGCCTT
GCTCATGCCGGAATGGTATCTGTACAACGTGTGCGGGACGTGTAATAGCG
AACCCGGACTCAAAAAAGGAGGCAATTCACGGCCTTTCCGCTGAGCAGTC
GAAGAATGGATTTGTCCTGACTTGTCAGACCCATCCTTGTGGACCGGGTC
TGGAGGTAGAGTTGGGCATGTACGACACGGTGTATGAATCGCAGTACGGC
CAATATGAGAAGAAGGCCACCACGGAGCAGAAAAGCAAGTTCAACGTATT
TGGCTAGATGCATAGTTTGGCTTTAACTTTGCTTGCATGCTTTATTTTCA
GTATTGCCCAGGCCTTTGTGCCATGCGTGCCCGGTTTAAGAGCTAAAAAT
GCGCAGAGAGTTGGCGCAATTAATGTAGTACCTCTTGAGCTCGAAGGTCA
ACTTGACCCGACCAAGACTTGGGATGTCAAAATGACGTACAAAGGAGAGA
CCAAGGTGCTCACGGTATCTGAAGACACCTGCATCTTGGAGGCTGCAGAG
AAGGAATGGGACGTGCCTTGCTCATGCCGGAATGGTATCTGTACAACGTG
TGCGGGACGTGTAATAGCGAACCCGGACTCAAAAAAGGAGGCAATTCACG
GCCTTTCCGCTGAGCAGTCGAAGAATGGATTTGTCCTGACTTGTCAGACC
CATCCTTGTGGACCGGGTCTGGAGGTAGAGTTGGGCATGTACGACACGGT
GTATGAATCGCAGTACGGCCAATATGAGAAGAAGGCCACCACGGAGCAGA
AAAGCAAGTTCAACGTATTTGGCTAGATGCATAGTTTGGCTTTAACTTTG
CTTGCATGCTTTATTTTCAGTATTGCCCAGGCCTTTGTGCCATGCGTGCC
CGGTTTAAGAGCTAAAAATGCGCAGAGAGTTGGCGCAATTAATGTAGTAC
CTCTTGAGCTCGAAGGTCAACTTGACCCGACCAAGACTTGGGATGTCAAA
ATGACGTACAAAGGAGAGACCAAGGTGCTCACGGTATCTGAAGACACCTG
CATCTTGGAGGCTGCAGAGAAGGAATGGGACGTGCCTTGCTCATGCCGGA
ATGGTATCTGTACAACGTGTGCGGGACGTGTAATAGCGAACCCGGACTCA
AAAAAGGAGGCAATTCACGGCCTTTCCGCTGAGCAGTCGAAGAATGGATT
TGTCCTGACTTGTCAGACCCATCCTTGTGGACCGGGTCTGGAGGTAGAGT
TGGGCATGTACGACACGGTGTATGAATCGCAGTACGGCCAATATGAGAAG
AAGGCCACCACGGAGCAGAAAAGCAAGTTCAACGTATTTGGCTAGATGCA
TAGTTTGGCTTTAACTTTGCTTGCATGCTTTATTTTCAGTATTGCCCAGG
CCTTTGTGCCATGCGTGCCCGGTTTAAGAGCTAAAAATGCGCAGAGAGTT
GGCGCAATTAATGTAGTACCTCTTGAGCTCGAAGGTCAACTTGACCCGAC
CAAGACTTGGGATGTCAAAATGACGTACAAAGGAGAGACCAAGGTGCTCA
CGGTATCTGAAGACACCTGCATCTTGGAGGCTGCAGAGAAGGAATGGGAC
GTGCCTTGCTCATGCCGGAATGGTATCTGTACAACGTGTGCGGGACGTGT
AATAGCGAACCCGGACTCAAAAAAGGAGGCAATTCACGGCCTTTCCGCTG
AGCAGTCGAAGAATGGATTTGTCCTGACTTGTCAGACCCATCCTTGTGGA
CCGGGTCTGGAGGTAGAGTTGGGCATGTACGACACGGTGTATGAATCGCA
GTACGGCCAATATGAGAAGAAGGCCACCACGGAGCAGAAAAGCAAGTTCA
ACGTATTTGGCTAG back to top
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