EWM28175.1, cds2466 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|585110520|gb|EWM28175.1| (alkylated dna repair protein alkb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0 Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query: 1 MPYCPSVQSSDTLCFLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGNSPFPFIFSTNHVCRVEGLETVRDRIAANIAYGAATNNDRRETFEVFITSILVVSHLLLLPFQPTLCILSLHLRDLDIPMMKARCFIH 434
MPYCPSVQSSDTLCFLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGNSPFPFIFSTNHVCRVEGLETVRDRIAANIAYGAATNNDRRETFEVFITSILVVSHLLLLPFQPTLCILSLHLRDLDIPMMKARCFIH
Sbjct: 1 MPYCPSVQSSDTLCFLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGNSPFPFIFSTNHVCRVEGLETVRDRIAANIAYGAATNNDRRETFEVFITSILVVSHLLLLPFQPTLCILSLHLRDLDIPMMKARCFIH 434
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|553196534|ref|XP_005856367.1| (2og-fe oxygenase, partial [Nannochloropsis gaditana CCMP526] >gi|422292692|gb|EKU19994.1| 2og-fe oxygenase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
Query: 15 FLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGN 347
FLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPG
Sbjct: 1 FLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGK 333
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|299115673|emb|CBN75873.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 147.132 bits (370), Expect = 1.004e-36 Identity = 98/230 (42.61%), Postives = 129/230 (56.09%), Query Frame = 0
Query: 122 GLQLFM-FLNEAEESSLLTLL---DSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRC-SLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPL-CECLFPASCDKRIP 345
GL L F+ E EE SLL D +W + RR QH+G D+ ++ +D P P+P D++ R+ G+ PS P DQ+T+NEY+PG GI+ H+D HS FEDGL +SLGS VMD R H D G R +L LPR SLLV++G ARY W+HG+ASRKTD V+G L R R+S +FRR+R +P + C C F SCD+ P
Sbjct: 140 GLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGP-LKRRVQHFGRV-FDYHTRHVDFDAPAPPLPECLTDVV----REMGDRGLK-PSDP-----------DQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMR---HPD------GVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRATRISFTFRRVR--DPAVACGCDFAKSCDRETP 340
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|294900091|ref|XP_002776895.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239884096|gb|EER08711.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 144.05 bits (362), Expect = 8.405e-36 Identity = 96/247 (38.87%), Postives = 137/247 (55.47%), Query Frame = 0
Query: 119 LPKGLQLFM-FLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVP----IPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKV--NGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGNSPFPFIFSTNH 358
LP GL L F+ E EE LL L+D+ +WD S + RR QH+G A F SL + + +P +L+ R R + A +A DQ+T+NEY PG GI+ H+D HS FE ++I+S+G V++FR+ ++G A P L LPRRSL V+ GE+R+ W HG+A RKTD+V +G LV R RR+SL+FR+++N CEC + A CD + P + P +H
Sbjct: 105 LPPGLTLIPDFITEEEEEKLLGLVDAGEWDHS-IRRRVQHFGHA---FDYTSLRAKDAFLDGEARMPAYTEELVRRIRAESVA-------------EARDFRPDQLTINEYIPGVGISFHVDTHSAFEGPIVILSIGGGIVLEFRKS-----EEGRALP---LWLPRRSLAVMGGESRFGWVHGIAGRKTDRVGPDGDLVERQRRISLTFRQMKNSP---CECEWAALCDTQNPASLVLPSRIGDSH 323
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|443704913|gb|ELU01726.1| (hypothetical protein CAPTEDRAFT_156565 [Capitella teleta]) HSP 1 Score: 147.517 bits (371), Expect = 3.432e-35 Identity = 118/392 (30.10%), Postives = 182/392 (46.43%), Query Frame = 0
Query: 15 FLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTY--MTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFM-FLNEAEESSLLTLLDSKQWD--------KSGVT---RRTQHYGAAAIDFRSKSLDTRRP-TVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTD-----------KVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCD--KRIPGNSPFPFIFSTN-HVCRVEGLETVRDRIAANIA 377
+ G G+ V+R E F+ +I+ + ++PGK Y +TF + A+ Q QG LP + V + + Y + + P + + LP GL L F+++ EE LL +D WD S ++ RR +H+G + + + ++D P + IP +C +L R QQ + DQ+TVN+YQPG GI H+D HS FE+ L+ +SLGS VMDF+ G + LP+RSL+V++GE+RY TH +A RK+D ++ L++R R S +FR++R NPP+CEC FP CD K N P ST+ E + V + IA + +
Sbjct: 34 LIANGGLGNSVSRDMLEKVFKPC----GSILDIVMVPGKPYSFVTFSDLSEAQSAVQSLQGTELPSSAASSEVPPV--KLYLSFVKSVPGAEVA---------SNILPAGLTLIQDFVSQEEEIELLKCID---WDYMDPQLKEDSKISLKHRRVKHFGFEFL-YSTNNVDPDHPLDMGIPPECSPILQRMLSQQIILNLP----------------DQLTVNQYQPGQGIPPHVDTHSAFEEELVSLSLGSQVVMDFK---------APGGCHYPVFLPQRSLVVMRGESRYQLTHAIAPRKSDVVPLACLTKDNQMKLTLMARMERTSFTFRKVR--NPPVCECDFPEQCDYQKLKKSNRPLTKPISTSPKELETEHVHQVYEEIATHFS 379
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|939266912|ref|XP_014253555.1| (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Cimex lectularius]) HSP 1 Score: 147.132 bits (370), Expect = 4.789e-35 Identity = 113/382 (29.58%), Postives = 193/382 (50.52%), Query Frame = 0
Query: 12 TLCFLGV--GMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTY--MTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFM-FLNEAEESSLLTLLDSKQWDKSGV--TRRTQHYGAAAIDFRSKSLDTRRPTVP--IPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTD---KVNGRLVSRGR--RVSLSFRRLRNGNPPLCECLFPASCDKRIPGNSPFPFIFSTNHVCRVEG--LETVRDRIAANIA 377
+C LG+ G+ D+ + FS I++ +P K+Y + FD ++++EK ++ G++ + + P+ +LF +++ PL + + + LP G LF FLN EE+ LT+ + +S R+ HYG A + + + ++D P +P +P C + R R ++ G + P DQ+T+N Y PG G+ HID HS FED +LI+SLGS +MDFR +D + P ++L RRS+LVL GE+RY WTHG+++RK D V+ LV++ R R+S + R++ G C+C +P++CD ++ + F+ H ++E + V D I+ + +
Sbjct: 37 VICNLGINDGISSSDII---------NFFSKYGKIVSASFVPRKSYSFILFDDVQSSEKCYRQINGKLALDNVKK-PLYLLFAQSFP-------------PLDNDIFDFSQLPPGATLFKDFLNLDEENEFLTIANESFVGQSTTLKQRKVFHYGYAFL-YENNNVDKNNP-LPNGLPKICD--IIRPRLNEK--GYPLLNNP-----------DQLTINLYSPGQGLPPHIDTHSAFEDEILILSLGSDCIMDFR-------KDSKHIP---VILKRRSMLVLAGESRYMWTHGISARKCDILYDVDQGLVNKERDTRISFTLRKILQGE---CKCYYPSTCDSQMANS------FNNEHPSKLEQQFVHQVYDTISDHFS 359
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|1069805002|ref|XP_018326744.1| (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Agrilus planipennis]) HSP 1 Score: 143.665 bits (361), Expect = 9.774e-34 Identity = 105/312 (33.65%), Postives = 153/312 (49.04%), Query Frame = 0
Query: 38 FSTDAAIIAVQILPGKT--YMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFM-FLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRP-TVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTD----KVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCD 341
FS I + +LPGK+ +++FD IK + K G VL PV + F + PE++I L P P GL + F+ ++EE + L L D + S R+ +HYG + ++D P IP +C L R R +A+P + D Q+TVN Y+PG GI +H+D HS FED + I+SLGSA VMDF+ + G SLL+P++S +++ GE+RY +THG+ RK D K + R RVS +FR++RNG C C F + CD
Sbjct: 66 FSKYGKIEQILMLPGKSCCFVSFDDIKCSTKAFNNING-VLNIAQYLKPVFLSF-------VENIPESLIEANLKHDSDP----PNGLIILENFITDSEERAFLALNDFNRLGSSLKHRQVKHYGYE-FKYDINNVDLNCPLEEKIPKECDILWERLR-------IAYPQLIFVEPD-------QLTVNCYKPGQGIPSHVDTHSAFEDPIFILSLGSAIVMDFK---------NDNGDHHSLLIPQKSFVIMSGESRYAYTHGITPRKLDILQTKAGLTVFHRAIRVSFTFRKVRNGK---CCCKFHSKCD 338
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|168033740|ref|XP_001769372.1| (predicted protein [Physcomitrella patens] >gi|162679292|gb|EDQ65741.1| predicted protein, partial [Physcomitrella patens]) HSP 1 Score: 137.117 bits (344), Expect = 3.187e-33 Identity = 97/310 (31.29%), Postives = 150/310 (48.39%), Query Frame = 0
Query: 53 KTYMTFDSIKTAEKVRQEW--------QGRVLPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFM-FLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFRE--QRHNDLQDGEAGP-------RCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRG-RRVSLSFRRLRNGNPPLCECLFPASCDKR 343
+ Y+++ ++ A R W QGRV+ + A + E V+ AD P GL L+ F+ +EE LL +D + W ++ RR QHYG + ++++++D + +P LL + + P+ P DQ+TVNEY G G++ HID HS FE +L +SLG +M+FR+ +R +++ ++ P R +L LP RSLL+L GEARY W H + K D VNG+++ RG RRVS +FR++R P C C F CD +
Sbjct: 57 RVYVSYHNVDDAVAARNAWNLKPCDALQGRVM-----------VIQHAVPQTQSSVEEQVVFTSSADVGVP------GLTLYTDFVTLSEEQELLREVDERSW-QTLAKRRVQHYGYEFL-YKTRNVDLSQKLGELPASLEPLLNKISLVPEIASAEEPTLPF----------DQLTVNEYPRGVGLSPHIDTHSAFEGSILSLSLGGPCIMEFRKYIKRAIVVRNDDSVPTGSVYIIRKALFLPPRSLLILSGEARYAWHHYIPHHKIDNVNGQVLDRGTRRVSFTFRKVR---PGACNCPFIEHCDSQ 334
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|751779193|ref|XP_011198671.1| (PREDICTED: alkylated DNA repair protein alkB homolog 8 [Bactrocera dorsalis]) HSP 1 Score: 141.354 bits (355), Expect = 6.727e-33 Identity = 115/353 (32.58%), Postives = 175/353 (49.58%), Query Frame = 0
Query: 7 VQSSDT-LCFLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQILPGKTY--MTFDSIKTAEKVRQEWQGRV-LPRRLSRHPVTVLFGRAYEAKINPEPENVIVDPLADTLTPATCLPKGLQLFM-FLNEAEESSLLTLLDSKQWDKSGVT-RRTQHYGAAAIDFRSKSLDTRRP-TVPIPIQCRDLLARARRQQQACGVAWPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNG----RLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGNS 348
++SS+ CFL + G +E ++ A++ V +LP K+Y + D++ AE++ GR L +R V++ +++ + EN+ PL P+GL L FL E+EE+ LL ++ + ++S + RR +H+G I + ++D +P IP +C L R + + G+ P D D DQ+TVN Y+PG GI H+D HS F D + +SL VMDFR R +D Q L L RRS+LV+ G +RY+WTHG+ R D V ++ R +R+SL+FRRLR G C+C FP CD RI S
Sbjct: 27 IESSEKPTCFLAILNAGLSTGLTEESVLSNAI--QYASVQQVIMLPNKSYCFLKCDNVNNAERIYNHMHGRAGLEQRGG-----VVYLSYFKSLPICKEENIWTKPL----------PEGLVLLPDFLTESEENMLLKAINIEDVEQSDLKHRRVKHFGYQFI-YGENNVDPTKPLNEKIPNECDILWPRLKTEMTKLGL-----PTWDWDVP----DQLTVNIYEPGQGIPPHVDTHSAFLDPIFSLSLFGDVVMDFR--RGSDRQ--------PLKLLRRSMLVMSGASRYDWTHGITPRTLDVVPSATGLTVMPRQKRISLTFRRLRRGP---CDCTFPTLCDSRINAQS 339
BLAST of EWM28175.1 vs. NCBI_GenBank
Match: gi|290996230|ref|XP_002680685.1| (predicted protein [Naegleria gruberi] >gi|284094307|gb|EFC47941.1| predicted protein, partial [Naegleria gruberi]) HSP 1 Score: 139.043 bits (349), Expect = 7.409e-33 Identity = 87/257 (33.85%), Postives = 133/257 (51.75%), Query Frame = 0
Query: 128 FLNEAEESSLLTLLDSKQWDKSGVTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVAWPSGPLADT-----DASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLGSAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLASRKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKR----IPGNSPFPFIFSTNHVCRVEGLETVRDRIAAN 375
F+ E EE+ ++ ++ K W + RR QHYG D+ +S+D PIP +++ R + + S ++D D DQ+T+NEYQPG GI HID H+ F DGL I+S+ + VM F + E + + LPRRSLL+L GEARY W H + R+ D+VNG++ R RRVSL+ R +R LC C + CD + I N P+ T ++ +E ++ ++IA++
Sbjct: 7 FITEEEEAKIMEQVEPKNW-VIELQRRVQHYGFK-FDYDIRSIDFNTQVEPIPEYTTNIMNRMKEAMKKKKEENDSTIMSDEFISTFDFETYNPDQLTINEYQPGQGIRPHIDVHTPFNDGLFIVSMLGSAVMYFSK-----CVGEEVVEKKYVDLPRRSLLILVGEARYLWRHAIMCRELDRVNGKIRKRQRRVSLTIRSVRKEG--LCTCKYTDVCDSQQNNEIAHNLPYSQQLGTTNL-EIEYVQKTYNQIASH 253 The following BLAST results are available for this feature:
BLAST of EWM28175.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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