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Properties
| Property Name | Value |
|---|
| Product | alkylated dna repair protein alkb-like protein |
| Orig transcript id | gnl|cribi|Naga_100004g116.9106.mrna |
| Orig protein id | gnl|cribi|Naga_100004g116.9106 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:476724..478090 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2474 ID=rna2474|Name=rna2474|organism=Nannochloropsis gaditana|type=mRNA|length=3238bp
GGAAAGGGCGAGAAAGCCTATGTTTGCAAGATTTCACCTCCCCGGCCACC
ACGCCAAGTCCGCAAGATCCAAAGCCAAGGAAGTAAATGGCAACGGAAGT
CACACACAGCTTCCGACATCATCTAGTCAAGATGTACCCTCCCGATCTCC
TCCTTTCGCGCTGCACTCTGGAGGGGCTACTCGAGATCCTTTATCGCCCT
GCCGACTTGGATATTTATACTCGGCCCCTTTGGTGCACAAGGCAGGTGGG
CAGGCCAAAGAGTTGGACATGCAGGACGGGATGCACATCGACATAGGCCA
AGAGCTTGGCCGGCTGAAACATACGCTTCATGATGCCCAACGCCGCATTC
TCTTTCGTGCCGAAGTTGCGACTGTGAAGAATTGCAGAAAGCTTTTAACT
ATAGGGTGTCGGATGCTACACTACACGGGAATTGGCAAGCCGTCCTGCTT
GATATTCGAGAAAGAAAAACCTGTCGGAGAGACCAACGTGTTGAGCATTG
AGACCCTAACTGAGCTCTTTGCAGCAGGAGGGGTCAGGACTCAGCTGGTA
TTTGTTAGCGCCCGGCATTCAGAAATTGTCGGCAGAGCTTTCATCGCTGC
GGGGGTGCGGCACGTGGTGGCAATGAAGTGGGACGCCAAGGTCTCGGACC
GCGCCGCCTGCATTTTCGCCGAATTCTTCTATTTGTCAATTGCCATGGGA
CGGACTGTGCGGCAGGCCTTCGAAGTAGCCAGCACGGCAGCGGTGACAGA
GACGGGGGTCTCGTCAGAGGATGAGCAGTTTCTCTTGTTGCCGGCGGACG
GGGAGCACGACCTAGCCGTGTTTGACGACGCGGAGATGGGCGAGTTCGTA
GACGAATCGCCCCCTCCCGTTCCTAACACATGTGATCCCCCCCCCGTCCC
ATTTGTCGGGCGAAATGTGGCAGCGCAAGAAGTCATAGGACTGCTCTCGA
TGGTCTCCCAGGGAAACCGCTGCATCACTGTGCGGGGCCGGCCGGGGGTA
GGGAAGACCGCCCTGGCCTCGAAGGTCTGCCAGTATCTGGCCGAGCGAAA
CCAATTCGATGCTATTTATATGGTTCCGTTGCGCCGAAAAGAGTATCGAT
CTTACGAGAAGGAAACGCTCTGCAAGGTGATTGGCGCGGCGATAGGCTTC
GAGGACGCTTCGAACGAGAGAGAGATCGTCTTCCTTTTGCAGGATAAGCA
TCCTTCTGGCCGCGTTATCATGGTGTTGGATGGGCCAGATCGCTTCTTCA
ATCGTTCCAACTCCCTCGTCCAAGTCCTCAGCTACTTGCTTTCGCGGATA
CACGGTCTCCATCTGCTCGTCACCGCGGAGGGCTCCGTTTTGGGAAGCGG
TTCGGGGCGCTTGGAAAGCTCATCCGAGAAAGTGGTGCACCTGGGACCGT
TGTCTGATGTAGCCACCGCACATATGCTTGCAAACATCGCCCCGCCTGGC
TTTGATTTGGAGGAGATGATGAGCAGGCCGTATGCGACGAGGGAGGAGGC
GTACGCGGAACTAGCGGCTTCTCCTGTCATACGAGAGCTGCGGGGTCATC
CAAAGGCGATCGTCATGTTCGCTCCTCTTCTGGAGGATCATCGGTTGGAA
GATTTGTACGACAAAGCCAAGCAATGCTACGTGGATGCTAGCCAGGTTGT
GGAAGTTGACACGCCCTCGATGGGGGAAGAGGAAAGTGGCATAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGAGGGTCG
AGAATCAGCAGTGCAGAGAACGGGAGAGACGAAAAGCGGGAGTTAGATGC
GCTGGCGTTAGCGCGGGAAACAGAAGAGGCTCGACAGTTCCTGCGAGAGC
CTACTTCTCAGCGCCTGTGGTTGGAGGTTGTACGACAGGGCGGAGCTCGG
CAGTCGTCAAGTATGCACCAAGGAGTTCCTTGGTATCGCTTGACCGACGC
GCTGCAAGAGGAGCTCCGCAAAGCCTTGATCGATGCATTAAGGCTATCGC
GATTCCATATCGAGGATTTTTGCGCCACGCATTGCTCCACCAATGGGAAT
GGAGGCGCTGAGGGCAGTAAAGCCTTCAGTCCGCCTGCAGTATCTGAAAC
AAAGCAGGACAGCAAGGTCGCTGACGGAGCCACTATTTCCATCGCGGATA
AGGATGGTACCATTCGGGGCCTTGAGCCAGGAGATATTCAATTCATCAAA
GACCGATTAGTCATTCGAACGCCGGAGAGTGATTTGGTGCGTATCACGGA
CTTTGCGGTGTTTTGTGAGGGCTGGGTCCCTGCACAAAACTCGATCGCTT
TGCTATGTAGGGAATGGCTTTGCAACAAGCCACGGCTGTTACATGGCTTT
TTATCGCGGAAAGAGACAGAAGCCCTGCTTCAGGGGTACAAGGAAGGTAC
ATTTCTGTTCCGTTTCAGCACGAGCCACCTAGGGCTTCTTTCTCTCTCCT
TCGTCGGCAAAAGTCGCAAGAATTATCCAAACGATGAGGAAGGTGAAAAA
AAGGCAAAGGCTTTGCACATACGACATTTTTTGGTCCAAGTGGAGGAAGA
CCGGAGATGCGTGGTTTTCATGGAGCCCGGTCGCTCCCGACACGCCTCGT
TGGAAGACTTGATCATGTCCTCTGCAAGCTTGCTAGAATTCTATCCTGGC
GTTCCTAAAGCTCATGCCCTCACGCAAATGCGGCGTTACAAAAGTTCCTA
AAGCTTAGGAGTGAGGATATCTTCTATTTAGAATTTTTGTTAAATTTGGA
AATTTTTGGACAGAAAAAAGTACATCCGGAAATCGAGAGGAATTTCGTGC
CTAACTCGATTTGACCGAAAACATATTGTCAATATGTATAGCTAACAATT
ATTCATTGGTATTTGGAGGATTACTAAAAAAATGCGGCACGTGTATGAAG
TGATGGAAGGGATATTTTTTTTTTCAAATCATCCGTTAAAAACGTACGGG
GTTTTGGCTTTTTTGTGTAACGTGTTTTTTAAATCCATGTCTGGCCCAGG
GCACGCGAAAAGATTGGTCCACCCGCGTGCCTGTGTATAAGTAGTTTACC
CTCTCTGTGGTCTACGAGGGCGCCCAGCTGCTTTCACTTTGCCCGATGCC
GTAATCGTCTAACTAATTGTGGCCCAGTATCTGCCCCACCAGATTCGAGT
TTTAGCTTCGCTCGGTGTCGGTAGTACGCGAGAGCTCAGGGGAGGTCGAG
TTACGAAAGCAGCGCTCGGAGAAGACGACAGTATTTGA back to topprotein sequence of rna2474 >rna2474-protein ID=rna2474-protein|Name=rna2474|organism=Nannochloropsis gaditana|type=polypeptide|length=434bp
MPYCPSVQSSDTLCFLGVGMKGDDVARSEWETRFRSLFSTDAAIIAVQIL
PGKTYMTFDSIKTAEKVRQEWQGRVLPRRLSRHPVTVLFGRAYEAKINPE
PENVIVDPLADTLTPATCLPKGLQLFMFLNEAEESSLLTLLDSKQWDKSG
VTRRTQHYGAAAIDFRSKSLDTRRPTVPIPIQCRDLLARARRQQQACGVA
WPSGPLADTDASCLGRDQMTVNEYQPGDGIAAHIDAHSLFEDGLLIMSLG
SAYVMDFREQRHNDLQDGEAGPRCSLLLPRRSLLVLQGEARYNWTHGLAS
RKTDKVNGRLVSRGRRVSLSFRRLRNGNPPLCECLFPASCDKRIPGNSPF
PFIFSTNHVCRVEGLETVRDRIAANIAYGAATNNDRRETFEVFITSILVV
SHLLLLPFQPTLCILSLHLRDLDIPMMKARCFIH back to topmRNA from alignment at CM002459.1:476724..478090- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2474 ID=rna2474|Name=rna2474|organism=Nannochloropsis gaditana|type=mRNA|length=1367bp|location=Sequence derived from alignment at CM002459.1:476724..478090- (Nannochloropsis gaditana)
ATGCCATACTGCCCTTCGGTCCAATCCTCCGACACACTGTGCTTCCTGGG
CGTAGGCATGAAGGGTGACGACGTCGCGAGGAGCGAGTGGGAGACGCGTT
TTCGGTCACTTTTTTCGACAGACGCGGCTATCATTGCTGTTCAAATTCTT
CCTGGGAAAACATATATGACATTTGATTCCATCAAAACAGCAGAAAAGGT
CAGGCAGGAGTGGCAGGGTCGAGTGCTTCCACGTCGACTTTCCCGTCATC
CAGTCACAGTCCTGTTCGGGCGAGCGTATGAGGCCAAAATTAATCCCGAG
CCTGAAAATGTCATTGTGGATCCTCTCGCAGACACCCTAACTCCTGCTAC
ATGTCTTCCTAAAGGGCTACAGCTTTTCATGTTTCTGAACGAAGCAGAGG
AATCATCGCTACTAACCCTGCTTGACTCAAAGCAATGGGACAAGTCTGGT
GTAACTCGGCGGACGCAGCACTATGGCGCGGCGGCTATCGATTTTCGATC
TAAAAGCCTTGACACAAGGCGACCTACCGTTCCAATTCCCATCCAATGTC
GAGACTTGCTGGCGCGTGCACGGCGACAGCAACAGGCGTGCGGCGTTGCC
TGGCCGAGCGGGCCACTCGCCGATACGGACGCTTCCTGCCTCGGCCGTGA
TCAGATGACTGTCAATGAATACCAACCAGGAGACGGCATTGCGGCCCATA
TAGATGCACATTCCTTATTCGAGGATGGACTGCTGATCATGTCGTTGGGA
AGTGCTTACGTCATGGACTTCAGGGAACAAAGGCATAACGATCTTCAGGA
CGGGGAAGCGGGCCCCCGATGCTCCTTGCTGCTTCCTCGGAGGTCTTTGC
TTGTGCTGCAGGGGGAAGCTCGCTATAATTGGACCCATGGACTAGCTAGT
CGCAAGACAGACAAAGTGAATGGCCGACTTGTCTCACGTGGGCGTAGGGT
CTCGCTGAGCTTCCGGCGGTTGCGGAATGGCAATCCGCCCCTTTGCGAGT
GTCTCTTCCCCGCCTCATGCGACAAAAGGATACCGGGAAAGTAGGTCAAT
TGTAAAAAATCGGTAGTATTCAATTCTTTAAAAACGAAGCACGCTATGTG
AGCTCGCCTTTTCCCTTCATTTTCAGCACCAACCACGTATGTAGAGTGGA
GGGCTTGGAAACCGTGAGAGACAGGATCGCAGCAAACATTGCGTACGGCG
CTGCGACAAATAATGACAGGAGAGAAACATTCGAAGTGTTCATAACGTCC
ATCTTGGTAGTCTCTCACTTGCTGCTGCTGCCCTTTCAGCCGACACTTTG
CATCCTTTCCCTTCATTTGCGCGACCTCGACATACCGATGATGAAAGCTC
GCTGCTTCATTCATTGA back to topCoding sequence (CDS) from alignment at CM002459.1:476724..478090- >rna2474 ID=rna2474|Name=rna2474|organism=Nannochloropsis gaditana|type=CDS|length=2610bp|location=Sequence derived from alignment at CM002459.1:476724..478090- (Nannochloropsis gaditana)
CTCGCCTTTTCCCTTCATTTTCAGCACCAACCACGTATGTAGAGTGGAGG
GCTTGGAAACCGTGAGAGACAGGATCGCAGCAAACATTGCGTACGGCGCT
GCGACAAATAATGACAGGAGAGAAACATTCGAAGTGTTCATAACGTCCAT
CTTGGTAGTCTCTCACTTGCTGCTGCTGCCCTTTCAGCCGACACTTTGCA
TCCTTTCCCTTCATTTGCGCGACCTCGACATACCGATGATGAAAGCTCGC
TGCTTCATTCATTGAATGCCATACTGCCCTTCGGTCCAATCCTCCGACAC
ACTGTGCTTCCTGGGCGTAGGCATGAAGGGTGACGACGTCGCGAGGAGCG
AGTGGGAGACGCGTTTTCGGTCACTTTTTTCGACAGACGCGGCTATCATT
GCTGTTCAAATTCTTCCTGGGAAAACATATATGACATTTGATTCCATCAA
AACAGCAGAAAAGGTCAGGCAGGAGTGGCAGGGTCGAGTGCTTCCACGTC
GACTTTCCCGTCATCCAGTCACAGTCCTGTTCGGGCGAGCGTATGAGGCC
AAAATTAATCCCGAGCCTGAAAATGTCATTGTGGATCCTCTCGCAGACAC
CCTAACTCCTGCTACATGTCTTCCTAAAGGGCTACAGCTTTTCATGTTTC
TGAACGAAGCAGAGGAATCATCGCTACTAACCCTGCTTGACTCAAAGCAA
TGGGACAAGTCTGGTGTAACTCGGCGGACGCAGCACTATGGCGCGGCGGC
TATCGATTTTCGATCTAAAAGCCTTGACACAAGGCGACCTACCGTTCCAA
TTCCCATCCAATGTCGAGACTTGCTGGCGCGTGCACGGCGACAGCAACAG
GCGTGCGGCGTTGCCTGGCCGAGCGGGCCACTCGCCGATACGGACGCTTC
CTGCCTCGGCCGTGATCAGATGACTGTCAATGAATACCAACCAGGAGACG
GCATTGCGGCCCATATAGATGCACATTCCTTATTCGAGGATGGACTGCTG
ATCATGTCGTTGGGAAGTGCTTACGTCATGGACTTCAGGGAACAAAGGCA
TAACGATCTTCAGGACGGGGAAGCGGGCCCCCGATGCTCCTTGCTGCTTC
CTCGGAGGTCTTTGCTTGTGCTGCAGGGGGAAGCTCGCTATAATTGGACC
CATGGACTAGCTAGTCGCAAGACAGACAAAGTGAATGGCCGACTTGTCTC
ACGTGGGCGTAGGGTCTCGCTGAGCTTCCGGCGGTTGCGGAATGGCAATC
CGCCCCTTTGCGAGTGTCTCTTCCCCGCCTCATGCGACAAAAGGATACCG
GGAAACTCGCCTTTTCCCTTCATTTTCAGCACCAACCACGTATGTAGAGT
GGAGGGCTTGGAAACCGTGAGAGACAGGATCGCAGCAAACATTGCGTACG
GCGCTGCGACAAATAATGACAGGAGAGAAACATTCGAAGTGTTCATAACG
TCCATCTTGGTAGTCTCTCACTTGCTGCTGCTGCCCTTTCAGCCGACACT
TTGCATCCTTTCCCTTCATTTGCGCGACCTCGACATACCGATGATGAAAG
CTCGCTGCTTCATTCATTGAATGCCATACTGCCCTTCGGTCCAATCCTCC
GACACACTGTGCTTCCTGGGCGTAGGCATGAAGGGTGACGACGTCGCGAG
GAGCGAGTGGGAGACGCGTTTTCGGTCACTTTTTTCGACAGACGCGGCTA
TCATTGCTGTTCAAATTCTTCCTGGGAAAACATATATGACATTTGATTCC
ATCAAAACAGCAGAAAAGGTCAGGCAGGAGTGGCAGGGTCGAGTGCTTCC
ACGTCGACTTTCCCGTCATCCAGTCACAGTCCTGTTCGGGCGAGCGTATG
AGGCCAAAATTAATCCCGAGCCTGAAAATGTCATTGTGGATCCTCTCGCA
GACACCCTAACTCCTGCTACATGTCTTCCTAAAGGGCTACAGCTTTTCAT
GTTTCTGAACGAAGCAGAGGAATCATCGCTACTAACCCTGCTTGACTCAA
AGCAATGGGACAAGTCTGGTGTAACTCGGCGGACGCAGCACTATGGCGCG
GCGGCTATCGATTTTCGATCTAAAAGCCTTGACACAAGGCGACCTACCGT
TCCAATTCCCATCCAATGTCGAGACTTGCTGGCGCGTGCACGGCGACAGC
AACAGGCGTGCGGCGTTGCCTGGCCGAGCGGGCCACTCGCCGATACGGAC
GCTTCCTGCCTCGGCCGTGATCAGATGACTGTCAATGAATACCAACCAGG
AGACGGCATTGCGGCCCATATAGATGCACATTCCTTATTCGAGGATGGAC
TGCTGATCATGTCGTTGGGAAGTGCTTACGTCATGGACTTCAGGGAACAA
AGGCATAACGATCTTCAGGACGGGGAAGCGGGCCCCCGATGCTCCTTGCT
GCTTCCTCGGAGGTCTTTGCTTGTGCTGCAGGGGGAAGCTCGCTATAATT
GGACCCATGGACTAGCTAGTCGCAAGACAGACAAAGTGAATGGCCGACTT
GTCTCACGTGGGCGTAGGGTCTCGCTGAGCTTCCGGCGGTTGCGGAATGG
CAATCCGCCCCTTTGCGAGTGTCTCTTCCCCGCCTCATGCGACAAAAGGA
TACCGGGAAA back to top
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