EWM28168.1, cds2464 (CDS) Nannochloropsis gaditana

Overview
NameEWM28168.1
Unique Namecds2464
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:471032..471878 -
Alignment locationCM002459.1:469719..470929 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28168.1
Productabc subfamily abcg
Orig transcript idgnl|cribi|Naga_100004g113.9099.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:471032..471878 -
CM002459.1supercontigCM002459.1:469719..470929 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR013525ABC_2_trans
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|585110513|gb|EWM28168.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 1410.2 bits (3649), Expect = 0.000e+0
Identity = 685/685 (100.00%), Postives = 685/685 (100.00%), Query Frame = 0
Query:    1 MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRKLSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM 685
            MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRKLSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM
Sbjct:    1 MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRKLSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM 685          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|553179694|ref|XP_005852746.1| (abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526] >gi|422295790|gb|EKU23089.1| abc subfamily abcg, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1404.04 bits (3633), Expect = 0.000e+0
Identity = 684/685 (99.85%), Postives = 685/685 (100.00%), Query Frame = 0
Query:    1 MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRKLSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM 685
            MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRKLSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRF+GCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM
Sbjct:   69 MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRKLSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFDGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM 753          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 542.347 bits (1396), Expect = 0.000e+0
Identity = 279/599 (46.58%), Postives = 389/599 (64.94%), Query Frame = 0
Query:   93 TNSRAGGRGTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLA-VNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY-------GSDKYTP-QLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKR 682
            T +R G +G            + T ++ IL  V G    G M+ALMGASGAGKSSLLDCISLRN +FEG V++D  P D  FF  +AYV+Q DLFF TLTVREHL FHAMVR+ + V    +  RVE ++  V L   +D+LIGG  + IRG+SGGERKR++VATELLS+P I+F DEPTSGLD+FMA +VC +L+ LA++G++V CVIHQPSS+ F+LFTHL LLA+G+ AY G     V+YFA+ LG  CP  +NPAD+ IE+LA V    EK    +  +   YQ S+L + NE W++ V+    S       ++  E+PAT+ TQF ES +RT+  Y REPVL + RL  +I MG++LGLVY  Q     A +N++G  F++ MNQ I++ F V Q +P+D AVFMREYL  ANR SSYFL  +L+E+P+Q+LFP +FGSI Y ++G  P A  +  F + L+L AN + S+GYALS +  +   A+A G V+++PM+L++G+L   D++  +  PL  +S+I+Y + AI++NEY       G +   P +  N V  Y+G    ++ F + ML V +  FR +A++ L   + R
Sbjct:   52 TETRRGAKGN-----------NVTVKKTILEGVTGSVRSGNMMALMGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAERVESILLDVGLQGCSDALIGGASSLIRGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLLAKGRMAYLGELPKAVDYFAA-LGHACPPNFNPADFFIEELAVVPSDYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVDPAVLSKPRRRTGIAITEYPATADTQFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFDQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPINCGFNVICPFRTGNAVLTYVGAAPDELSFNMGMLFVFMLCFRLVAFMALKWHSTR 638          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 501.516 bits (1290), Expect = 1.451e-165
Identity = 246/579 (42.49%), Postives = 374/579 (64.59%), Query Frame = 0
Query:  114 SKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVA-VEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY--------GSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRA 683
            S +  + IL NV G  + GQM+A+MG+SGAGKS+ LDC+SLRN +F G VY++  P D  ++  + +V+Q DLF  T+TVREHLTFHAMVR+  ++P+  RL RVE+V+  V ++   +++IGGP    RG+SGGE+KRL+  TELL++P I+FADEPTSGLD+FM   VC  ++ LAD G+++ CVIHQPSS+ F+LFTHL+LLA+G+  Y G  A    YF+S LG+ CP F+NPAD+ I ++++    ++  +A ++ +   Y++S LA  N AW A++     +    A  VS + F A++WTQF  + KR +++  R     K +   ++ MG+ILG +Y  Q     + KN +G  FL+IM Q++ SMF V Q  P +  VF+RE L+ ANR SSYFL  +L+E+P  +++P IF +I Y +    P A RF+ +I T++L+AN + S+GY +S++T H+ VA AL P+ ++PM+L+AG+L   + +P +   LD  S+IKY +Q +++N+Y        GS     +    V  Y+G    ++G  + +LV L+  FR LA+ FL  ++ RA
Sbjct:  141 SGSYSKEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGGPGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLLAKGRIVYNGPMATLQSYFSS-LGVICPHFHNPADFFINQISIVPTEQEASMARLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKA--VSMKHFHASTWTQFYYTMKRNIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQYTDRELSCVGSLFCRWKTGTAVMNYVGTSPQKVGETMGILVALIIIFRLLAFFFLTRKSNRA 716          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|298713079|emb|CBJ48854.1| (ABC transmembrane transporter [Ectocarpus siliculosus])

HSP 1 Score: 401.364 bits (1030), Expect = 2.504e-128
Identity = 232/583 (39.79%), Postives = 338/583 (57.98%), Query Frame = 0
Query:  134 MLALMGASGAGKSSLLDCISLRNHRFEGCVYLDRNPVDTHFFS-TSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWM-------------------ADVEETAGSGMGVAALV---SSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDK---YTPQLRNFVF-------EYIGVQEG--QIGFCIAMLVVLLFGFRFLAYVFLLIRAK 681
            MLA+MG SGAGK+SLL+C+SLRN  + G V  +  P D      T+A+V Q DLF  TLT REHL FHA +R+ + +    +++ VE  ++ + L K A++ IGG  + IRG+SGGE+KRLS ATE+L D  +IF DEPTSGLD+FMA +V   L+ LA+SGR +   IHQPSS +F LF+HL LLA G+T Y G       +F + +G  CP FYNPAD+ I+     V+   P    E   R+  +++  R + A+                    +   E  G+    AA+V   S + + AT W Q VE YKRT+  Y REPVL K RLGQ + + +++GL++LQ        ++ +G +F + +NQ I     V QV P +M VF+RE+ + A R SSYF G +LAE+P QV+FP +F  I Y L GF  EA  F +FIV +VL +N++ SLGY +S       VA+A+GP++++P  ++ G+L +   +P YF+     S I+Y ++AI +  + S +     P+    VF       +Y+  + G  ++      LV L+ GFR LA+  LL R++
Sbjct:    1 MLAIMGPSGAGKTSLLNCLSLRNQSYSGTVLHNGKPPDMDMVGITTAFVQQEDLFIPTLTPREHLRFHANMRMSRTLSPEQKMQAVETALEGLGLGKCANTPIGGQGSTIRGISGGEKKRLSFATEVLGDAPVIFVDEPTSGLDSFMAEAVVTKLRALAESGRTIVATIHQPSSHVFSLFSHLHLLAEGKTIYCGPLDRANAHFEA-IGHPCPNFYNPADHYIK-----VMSRDPSSFDESERRITAAADGYRQSAAYTQTEANLPTAVVTAARQEVKSGDREDDGATSARAAVVKPASHKVYQATWWRQAVEVYKRTIIMYRREPVLTKARLGQTVVVAVLVGLIFLQLGNSQRDVQSTMGVLFFVAINQGILGTIGVLQVFPNEMPVFLREHDSGAYRVSSYFFGRTLAEIPIQVVFPTVFSVIIYLLCGFPLEAKPFLLFIVYIVLTSNSAISLGYVVSAFAKSVDVALAVGPMILMPFIIFGGLLINLSEIPVYFMWYSIFSFIQYGYKAISIVIWESKESLDCPPEPEPCVFPTGQDVLDYLEFEGGNRELWLNFVYLVALMVGFRILAFFALLYRSR 577          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|291244253|ref|XP_002742012.1| (PREDICTED: protein white-like [Saccoglossus kowalevskii])

HSP 1 Score: 399.823 bits (1026), Expect = 1.625e-126
Identity = 221/579 (38.17%), Postives = 338/579 (58.38%), Query Frame = 0
Query:  119 RHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNH---RFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKP-EVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSW-TQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQ-VLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNF----------VFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAK 681
            + IL  V G+ E G +LA+MGASGAGKS+L++ ++ RN      EG V ++  PV     S+SAYV Q DLFF  L VREHL F A++R+   +P   R+ RVEEVI  + L+K A+++IG P   I+G+SGGE KRLS A+E+L++P ++F DEPTSGLD+FMA SV   L+ LA  GR + C IHQPSSE++ +F  ++L+A G+ A+ G+ +  + +F++ +G  CP  YNPAD+ I+KLA+    E+     VE +   Y  S  A++    M   E     G+     + SR     SW  QF     RT     REP++ +VR  Q + + LI+GLV+LQQP+D  + +N  G +FL I N + A++F V QV P ++ VF+RE+     R   YF+  +L E+PYQ ++ P +F +I YW++G  P    F I    LVL+ N S S GY +ST +    VA+A+ P L++P+ L+ G+  ++  +P YF+ L  +S  KY ++ + +N++ +        N+          V   +          I +++VLL  +R +AY+ L+ R++
Sbjct:  111 KRILRRVSGYVEPGTLLAVMGASGAGKSTLMNVLTYRNRGNLTVEGHVMINGQPVGRSIASSSAYVQQEDLFFGNLRVREHLIFQALLRMDSHIPKKGRMERVEEVIRELGLSKCANTIIGNPARGIKGISGGEMKRLSFASEVLTNPPLMFCDEPTSGLDSFMAQSVVATLQHLAAQGRTILCTIHQPSSEVYAMFDRVLLMAEGRNAFLGSTSDALRHFSN-IGHTCPTNYNPADFYIQKLAIEPGKEQQCREKVEKLCDAYDQSIFAKEVYDKMKPSE---SKGLLEDHNIKSRSPYKASWFAQFRAVMWRTYLDNSREPMIIRVRTVQTVIIALIIGLVFLQQPYDQDSIQNINGCLFLFITNMTFANLFAVIQVFPLELPVFLREHFNGMYRTDVYFICKNLVELPYQFIILPIVFTAITYWMVGLYPYFVNFCICAGILVLVCNVSVSFGYMISTFSPSVSVALAIAPPLIVPLLLFGGLFLNTSDIPVYFIWLQYISWFKYGYECLTVNQWQNIDDIECPANYSVPCITDGQTVLASLSFSADNFMMDIYLILVLLVVYRLIAYIGLVWRSQ 685          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|919001906|ref|XP_013409673.1| (PREDICTED: protein white-like [Lingula anatina])

HSP 1 Score: 395.201 bits (1014), Expect = 7.883e-125
Identity = 221/584 (37.84%), Postives = 336/584 (57.53%), Query Frame = 0
Query:  119 RHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNH---RFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNV-LLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSW-TQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQP------FDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGS-------DKYTPQLR--NFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKR 682
            +HIL +V G  + G +LA++GASGAGKS+L++ ++ RN      +G V ++   +     + S YV Q DLF   LTVREHL F A +R+ +EVP  +R+ RVEEVI+   L+K AD+ IG P   I+G+SGGE KRLS A+E L+DP ++F DEPTSGLD+FMA S+   LK +A  G+ + C IHQPSS++F +F  L+LLA G+ AY G  AG  ++F   L   CP  +NPAD+ I  LA+    ++  +  V ++   Y SS  ++  +  MA+  +  G    + A +S +     +W  QF   + R+  +  R+P+  ++R  Q+I + ++LGL+YL+QP      +D SA +N  G MFLL+ N S A+MF V    P ++ VF R++     R   YFL  + AE P  V+ P IF +IAYW++G  P    F   +  L+L+AN + S GY +ST      VA+AL P L++P  L+ G   + D VP YF+ L+ +S   Y+ + I + ++ +       +  +   R    + +Y   +E  I   I +LV LL G+R +AY+  LI+  +
Sbjct:   93 KHILRDVNGCVKPGSLLAVIGASGAGKSTLMNVLTYRNRGNLVVDGTVKVNGKVIGPGITNVSVYVQQEDLFIGVLTVREHLQFQAQLRMDREVPFEERMDRVEEVIEETGLSKCADTRIGIP-GRIKGISGGEMKRLSFASEALTDPPLMFCDEPTSGLDSFMAESIVHTLKTMARKGKTILCTIHQPSSQVFAMFDQLLLLAEGRVAYMGPTAGAFKFFQE-LNFTCPPNFNPADHFIHTLAIKPGQVDTCKQRVNEICDGYDSSPFSKAIQDNMAEQGQENGDNFFLDAAISGKAVYKANWFQQFRAVFWRSWLTMVRDPMAYRIRTIQSIFIAVLLGLIYLRQPDKNEGYYDQSAVQNINGLMFLLLTNNSFANMFPVINTFPLEIPVFKRDHNNGMYRTDVYFLCKTFAEFPSYVITPLIFSAIAYWMVGLYPGGEEFLFNMAVLILVANCAVSFGYIISTAANSLTVALALAPPLLIPFMLFGGFFLNQDSVPVYFIWLNYMSWFPYSNEVITVVQWRNVDTILCHNGTSCAFRTGQDIIDYYSFKEENILRNILLLVALLVGYRLIAYIIFLIKTWK 674          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|1061480899|gb|ODM98292.1| (Protein white [Orchesella cincta])

HSP 1 Score: 384.03 bits (985), Expect = 1.096e-120
Identity = 210/587 (35.78%), Postives = 342/587 (58.26%), Query Frame = 0
Query:  119 RHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNH---RFEGCVYLDRNPVD-THFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNV-----LLEKPEVAVE-----DMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTP--------QLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRA 683
            + IL NV G A  G++LA+MGASGAGK+SLL+ ++ RN       G   ++  P+D       SAY+ Q D+F  TLT REHL F A++R+ +E    +R+R+V+EVI  + LT  AD++IG P   I+G+SGG++KRLSVA+E+L+DP+++  DEPT+GLD+FMA ++ K LK LA+ G+ + C IHQP+S+ F +F  L+L++ G+ AY+G       YF+S +G  CP+ YNPAD+ I  LA+ V      L++ +   +     D  +  +++  ++D+E   A  E        VA       + A+ + QF   + R+  +  ++P++ KV+L Q I + L++GL+Y  Q  D  + +N  G +F++I N + +S+F V+ V   ++ VFMRE+     R  +Y+L  + AE+P  ++ P IF SI+YW++G   +  RFFI + T VL+AN   S GY  ST+T      +AL PV++ P  L+ G   + D +P YF+ L  +S   Y  +A+ +N++   K           +  N V + +  +E   G  +A L  L+   R ++Y  L+++++R+
Sbjct:   89 KQILKNVSGIARAGEILAIMGASGAGKTSLLNILTFRNTSSLNISGTRMVNGVPIDAVQLTLISAYIQQDDIFIGTLTPREHLRFQALLRMDKEFSYKERMRKVDEVIKEMGLTGCADTIIGIP-GRIKGLSGGQQKRLSVASEVLTDPQLLICDEPTTGLDSFMAANLVKTLKSLANKGKTIICTIHQPASDTFAMFDKLLLMSEGRVAYYGDAKKAPTYFSS-IGYPCPETYNPADFYIHTLAIRVDNAEECLQRSKAICDKYDESDNAKALKATAFSKDDELSKALKE--------VAKKRQKSPYKASWFAQFRACFWRSSITVRKDPLVLKVQLIQTIFLSLVIGLIYFGQENDQESIQNISGCIFMIIANLTFSSIFPVTNVFWSELPVFMREHFNGMYRTDTYYLAKTFAELPVYLILPAIFISISYWMVGLNDDIDRFFIAVGTAVLVANVGSSFGYMASTVTPSFETTMALAPVMITPFMLFGGSFLNKDSIPVYFIWLKYLSWFLYGNEALSINQWKGIKNITCEEGLACIEDGNQVLDSLSFKEDNFGMSLACLGGLIVVTRLISYGGLVMKSRRS 665          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|1191046113|ref|XP_020900669.1| (protein white-like isoform X2 [Exaiptasia pallida])

HSP 1 Score: 383.259 bits (983), Expect = 1.761e-120
Identity = 226/623 (36.28%), Postives = 346/623 (55.54%), Query Frame = 0
Query:   86 GNGGDVLTNSRAGGRGTT------RGTSINESLGSKTAE------RHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNH---RFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY-----------GSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKR 682
             +GG+ L  S    +G        RG SI + L  K  E      + IL++V G  E G +LA+MGASGAGK++L++ ++ RN    +  G V ++  PV  +  S SAYV Q DLF  TLTVREHLTF A++R+ + V   +RL +VE+ +  + L K AD++IG P   +RG+SGGE+KRLS A+E+L+DP I+FADEPTSGLD+FMA SV   L+ LA  GR + C IHQPSSE++ +F+ +M +A G+ A+ G+    + YF S LG  CP  +NPADY ++ LA+      P    +   R  +  +   +  A     E T  +      +++ + + A+  TQF     R+  S  R+ ++ ++R+ Q++   LI GL+YLQ P D+S  +N  GA+F L+ + S +S+  V  V P ++ VF+R++     R   YFL  + AEVP  +L P +  +IAYW+IG  PE   F      L L+ N + S GY +S L      A +LG  LMLP+ L+ G       VP YF+ +  +S  +Y F+ +++N++           G++           E++G+ +      I  L+ L  GFR +A++ LL R+ +
Sbjct:   38 ASGGENLKRSTLSWKGINVFAPIDRG-SICKRLCCKGGEAEEPGIKQILFDVNGTVEPGTLLAVMGASGAGKTTLMNVLAHRNIGSVQVMGTVMVNNTPVGININSISAYVQQEDLFIGTLTVREHLTFQALLRMDKHVSKKERLDKVEQALHELGLMKCADTMIGIP-GRMRGISGGEKKRLSFASEVLTDPAILFADEPTSGLDSFMAQSVVSTLQRLASQGRTIVCTIHQPSSEVYAMFSSVMYMAEGRVAFLGSSIKALPYFDS-LGYSCPPNFNPADYFVQLLAI-----VPGQEDDCHERAKKICDAFEEQTAKEDHDESTRKNSFSENEVITHQPYKASWCTQFRAVLWRSWISTQRDKLMFRIRVIQSVVTALIAGLIYLQTPIDTSGVQNLSGAIFFLVTSVSFSSLQGVIFVFPAELPVFLRDHKNGMYRTDVYFLSKTFAEVPIFILSPLVLTAIAYWMIGLRPEFLPFVYAFCILTLLTNVALSYGYIISGLAPTVEGASSLGAPLMLPLMLFGGFFLKDSTVPDYFLWIKYISWFRYGFELMIVNQWDGYGTISNCTAGAEALCIPDGQAAIEFLGLDKDNFMIDIYALLALFVGFRIIAFLLLLRRSSK 652          
BLAST of EWM28168.1 vs. NCBI_GenBank
Match: gi|1191046111|ref|XP_020900668.1| (protein white-like isoform X1 [Exaiptasia pallida] >gi|999974919|gb|KXJ14093.1| Protein white [Exaiptasia pallida])

HSP 1 Score: 383.645 bits (984), Expect = 1.888e-120
Identity = 226/623 (36.28%), Postives = 346/623 (55.54%), Query Frame = 0
Query:   86 GNGGDVLTNSRAGGRGTT------RGTSINESLGSKTAE------RHILYNVVGHAEKGQMLALMGASGAGKSSLLDCISLRNH---RFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFHAMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGERKRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACVIHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNPADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGSGMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMGLILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVFMREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRFFIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLHSSDHVPWYFVPLDKVSMIKYAFQAIVLNEY-----------GSDKYTPQLRNFVFEYIGVQEGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKR 682
             +GG+ L  S    +G        RG SI + L  K  E      + IL++V G  E G +LA+MGASGAGK++L++ ++ RN    +  G V ++  PV  +  S SAYV Q DLF  TLTVREHLTF A++R+ + V   +RL +VE+ +  + L K AD++IG P   +RG+SGGE+KRLS A+E+L+DP I+FADEPTSGLD+FMA SV   L+ LA  GR + C IHQPSSE++ +F+ +M +A G+ A+ G+    + YF S LG  CP  +NPADY ++ LA+      P    +   R  +  +   +  A     E T  +      +++ + + A+  TQF     R+  S  R+ ++ ++R+ Q++   LI GL+YLQ P D+S  +N  GA+F L+ + S +S+  V  V P ++ VF+R++     R   YFL  + AEVP  +L P +  +IAYW+IG  PE   F      L L+ N + S GY +S L      A +LG  LMLP+ L+ G       VP YF+ +  +S  +Y F+ +++N++           G++           E++G+ +      I  L+ L  GFR +A++ LL R+ +
Sbjct:   58 ASGGENLKRSTLSWKGINVFAPIDRG-SICKRLCCKGGEAEEPGIKQILFDVNGTVEPGTLLAVMGASGAGKTTLMNVLAHRNIGSVQVMGTVMVNNTPVGININSISAYVQQEDLFIGTLTVREHLTFQALLRMDKHVSKKERLDKVEQALHELGLMKCADTMIGIP-GRMRGISGGEKKRLSFASEVLTDPAILFADEPTSGLDSFMAQSVVSTLQRLASQGRTIVCTIHQPSSEVYAMFSSVMYMAEGRVAFLGSSIKALPYFDS-LGYSCPPNFNPADYFVQLLAI-----VPGQEDDCHERAKKICDAFEEQTAKEDHDESTRKNSFSENEVITHQPYKASWCTQFRAVLWRSWISTQRDKLMFRIRVIQSVVTALIAGLIYLQTPIDTSGVQNLSGAIFFLVTSVSFSSLQGVIFVFPAELPVFLRDHKNGMYRTDVYFLSKTFAEVPIFILSPLVLTAIAYWMIGLRPEFLPFVYAFCILTLLTNVALSYGYIISGLAPTVEGASSLGAPLMLPLMLFGGFFLKDSTVPDYFLWIKYISWFRYGFELMIVNQWDGYGTISNCTAGAEALCIPDGQAAIEFLGLDKDNFMIDIYALLALFVGFRIIAFLLLLRRSSK 672          
The following BLAST results are available for this feature:
BLAST of EWM28168.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110513|gb|EWM28168.1|0.000e+0100.00abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553179694|ref|XP_005852746.1|0.000e+099.85abc subfamily abcg, partial [Nannochloropsis gadit... [more]
gi|585102296|gb|EWM21944.1|0.000e+046.58white [Nannochloropsis gaditana][more]
gi|585102173|gb|EWM21831.1|1.451e-16542.49abc subfamily abcg [Nannochloropsis gaditana][more]
gi|298713079|emb|CBJ48854.1|2.504e-12839.79ABC transmembrane transporter [Ectocarpus siliculo... [more]
gi|291244253|ref|XP_002742012.1|1.625e-12638.17PREDICTED: protein white-like [Saccoglossus kowale... [more]
gi|919001906|ref|XP_013409673.1|7.883e-12537.84PREDICTED: protein white-like [Lingula anatina][more]
gi|1061480899|gb|ODM98292.1|1.096e-12035.78Protein white [Orchesella cincta][more]
gi|1191046113|ref|XP_020900669.1|1.761e-12036.28protein white-like isoform X2 [Exaiptasia pallida][more]
gi|1191046111|ref|XP_020900668.1|1.888e-12036.28protein white-like isoform X1 [Exaiptasia pallida]... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2472rna2472Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications