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Properties
| Property Name | Value |
|---|
| Product | abc subfamily abcg |
| Orig transcript id | gnl|cribi|Naga_100004g113.9099.mrna |
| Orig protein id | gnl|cribi|Naga_100004g113.9099 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:469511..472357 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2472 ID=rna2472|Name=rna2472|organism=Nannochloropsis gaditana|type=mRNA|length=1074bp
GTAAGAAAATACTTCATTTCATATACTCATATGTATTCAGGGCACATCTT
ATCTCACAATGGAGTCGATAGCCGAAAAACTGAAAATACTTGATTCAAGG
ATTGGTACATCCTCCATGTCTCCTCCTAGCGTGGATCGCCTTTCCTTTGT
TGTACAGCAGCCAACTCAGCGCGAACTATTTCTTAAGGTCGGATTTTGGT
TGATTGAAAGATTAGATGGGACGCAGAGCGATTTTTCGTATGCACAGCGC
CGTAAAAGTGTTGAAGATCTTGTCTCAGATATTTCGGAACGAAAAATCTT
GCAGCAGTGTGGCGAAGAGGCTATGAGAGCCTTTGAGTTGGGCCGCGGAA
AAGCGGTCTGTCGTGTCCTAGATAGCCTTTGCGATCTCGTATTAGCCAAA
GTAGGGTTTCGCTGGCAGAGGCCTGTCCATACAATTTGTAGGGAGATTCC
GCTGAAGGCTGACAGCAAGGAGACAGAAGCCGTCCGGAGATCAATAAAAG
AATCATTTCCAATGCTCTTGCACCTTCAGGATCCCTCAGCTGATGACCAA
CAGAATACTAATAGCGTAAAGGAATGTAAGGCGGAAAGGAAGAATAGCGA
TCACACGTCTAACCGACTTCATGATCAGAGTGAAAGTAAGGAGCAGCGGT
ATAAAGCACGAGTTCTCCAGCTCAAAAATCAAATTATCGATCAGCAAAAC
GTATGTCAATTACAATCAAGACGGATACAAGTCCTCAAAAACGATTTACG
AAAGCTAAATGAGCGTTGCGTGCGACTGCAGCAAAAAGAAAGGGAGGCAT
TAAGTGATAACCCACTAGGTCGCATGTCCTCACCAGAAGCCATTGCTGAC
GCTAAAGATGTAACTTGCACTCCTCTAGTTGTAAGGTTGAAAATTGCGGA
CATGAAAATGAAGGAGGAGATCCCAGCTCTGAAATTCAAGACGGGTATAA
TCCGGCATTCTCTCTTCAGTGAAAAGAGCTATTCGAGTTCTACCCACTAT
GATTGTGTGAGTGCGACACCTGTTGACGATTACGAAGAAGATGAATAAGA
TAGACAATATACAGGACATCGCGT back to topprotein sequence of rna2472 >rna2472-protein ID=rna2472-protein|Name=rna2472|organism=Nannochloropsis gaditana|type=polypeptide|length=685bp
MTGTSDIELGKLSNASSNLKLSGSDEGQNRKGYDAPKPSSATSLRWNIRK
LSVPIKRKHLARLQGNLEFLGQQHGSGRDTNMPFRGNGGDVLTNSRAGGR
GTTRGTSINESLGSKTAERHILYNVVGHAEKGQMLALMGASGAGKSSLLD
CISLRNHRFEGCVYLDRNPVDTHFFSTSAYVHQVDLFFATLTVREHLTFH
AMVRVKQEVPIADRLRRVEEVIDAVNLTKVADSLIGGPQAFIRGVSGGER
KRLSVATELLSDPEIIFADEPTSGLDAFMALSVCKILKGLADSGRLVACV
IHQPSSEIFELFTHLMLLARGQTAYFGTRAGGVEYFASMLGLECPQFYNP
ADYLIEKLAVNVLLEKPEVAVEDMLRVYQSSELARDNEAWMADVEETAGS
GMGVAALVSSREFPATSWTQFVESYKRTVKSYGREPVLAKVRLGQAISMG
LILGLVYLQQPFDSSATKNRLGAMFLLIMNQSIASMFTVSQVIPKDMAVF
MREYLTSANRPSSYFLGLSLAEVPYQVLFPCIFGSIAYWLIGFAPEASRF
FIFIVTLVLMANASCSLGYALSTLTGHDGVAVALGPVLMLPMSLYAGVLH
SSDHVPWYFVPLDKVSMIKYAFQAIVLNEYGSDKYTPQLRNFVFEYIGVQ
EGQIGFCIAMLVVLLFGFRFLAYVFLLIRAKRALM back to topmRNA from alignment at CM002459.1:469511..472357- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2472 ID=rna2472|Name=rna2472|organism=Nannochloropsis gaditana|type=mRNA|length=2847bp|location=Sequence derived from alignment at CM002459.1:469511..472357- (Nannochloropsis gaditana)
CCGCTGGATCTGCCAGGATACACTCGCCCGTCACGCGACGTGTCACGTGC
CCGTGTCCCAGACACCGTCGGGGGCACATGTCTCATCTATTGCATGAAAA
AATGCTCTAGCACTGTCTCGTGCTTTGGTATTTGGAGCTCGAGGTGGCGT
CGCGTCGCGTTCAGGCGGGTCTGACCACTCGTGCCATCTCTGTTGTCGGA
ACGGCAGAGCCCGTCGCTCCTACCCTGCCTTCCTGGCTGTCACACGTATT
GACACACAATCTTTCCCCTCCTGCAATAAAGTGCGAGCCTTACTTTACGC
AGGAGTGTACCAGTGCAGCAGGCGCGTGCCCACTACATTTGGATAGAGAA
CAGGGCAAAGCAAGACCTCCTCCACCTCCTCCTCCCCATCCTAGAGGGTG
GTCTGTCCGATTGCCAAGCTGGAAACACTATCAACTTATCAGATCCATTC
ACGTGTTGGGTTTCGACGGAAGTCATAAAATGACAGGCACGTCCGACATC
GAGCTCGGCAAACTGTCTAATGCGTCGTCTAATCTCAAGCTCAGCGGGAG
CGATGAAGGTCAAAATCGGAAAGGTTACGACGCGCCAAAACCAAGTTCCG
CGACATCATTGCGGTGGAATATCCGGAAGCTCAGCGTGCCCATAAAAAGA
AAGCACCTCGCCAGACTACAGGGCAATTTGGAATTCCTGGGTCAGCAACA
CGGTTCGGGACGCGATACCAATATGCCATTCCGAGGCAACGGGGGCGACG
TCCTCACAAACAGTAGGGCGGGGGGTCGAGGCACCACGAGGGGTACCTCC
ATCAATGAGAGTCTAGGTAGTAAGACAGCAGAGCGGCACATTTTATATAA
TGTGGTCGGACACGCCGAGAAAGGGCAAATGTTGGCCTTGATGGGGGCGT
CAGGAGCCGGCAAGTCATCTCTGCTTGATTGCATATCCCTGCGCAACCAT
CGCTTTGAGGGCTGCGTGTACTTGGATCGGAATCCGGTAGACACGCACTT
TTTCTCGACAAGTGCGTACGTACATCAGGTAGACCTCTTTTTCGCGACAC
TGACAGTCCGAGAGCACCTGACGTTTCATGCCATGGTGCGTGTGAAGCAG
GAAGTGCCGATCGCAGACCGTCTACGTAGAGTTGAAGAGGTAATCGATGC
AGTCAATTTGACCAAGGTTGCTGACTCCCTGATCGGCGGACCTCAAGCTT
TCATCCGAGGCGTCTCGGGGGGGGAGCGGAAGCGCCTGTCCGTTGCGACA
GAGCTCCTGTCGGACCCGGAGATCATCTTCGCCGATGAGCCAACTTCAGG
TTTGGACGCGTTCATGGCACTATCGGGTACGATAAATGAAAGAATACTGA
GGAGAAAGAAACATTTGCTCACATATCATGACGGCATTATGAAATTTCTC
ATGTACGCATTTTAAATTCCAAATACAGTGTGCAAGATCCTCAAGGGATT
GGCTGACAGTGGGAGGCTGGTGGCATGCGTCATCCACCAACCATCATCCG
AGATATTTGAGCTTTTCACTCATCTGATGCTTCTGGCCAGGGGCCAGACG
GCATATTTCGGTACGCGTGCAGGCGGTGTCGAATATTTCGCATCGATGCT
TGGTCTCGAATGCCCGCAATTTTACAACCCGGCAGACTACCTGATCGAGA
AGCTGGCGGTCAACGTGCTGTTGGAGAAGCCTGAAGTGGCTGTGGAAGAT
ATGCTACGAGTATATCAGTCGTCGGAACTTGCGCGAGATAACGAGGCCTG
GATGGCGGACGTGGAGGAGACCGCAGGTTCAGGAATGGGCGTGGCTGCTC
TAGTTTCCAGTCGGGAATTTCCGGCAACGTCGTGGACCCAGTTCGTGGAG
AGCTACAAGCGCACGGTTAAGTCCTACGGACGAGAGCCTGTGCTGGCTAA
GGTCCGCTTAGGGCAGGCGATCTCGATGGGGTTGATATTGGGTTTGGTGT
ATCTGCAGCAGCCGTTTGATTCAAGTGCTACCAAGAATCGTCTGGGCGCC
ATGTTCCTGCTAATTATGAATCAAAGCATCGCATCCATGTTCACAGTTTC
GCAAGTCATTCCCAAGGACATGGCTGTTTTTATGCGCGAGTATTTGACAA
GCGCCAACCGGCCATCGTCCTACTTCCTGGGCCTTTCTCTTGCAGAGGTC
CCGTATCAAGTCCTTTTCCCCTGTATTTTCGGGTCTATAGCTTACTGGCT
AATAGGTTTTGCACCAGAAGCGAGTCGATTTTTTATCTTCATCGTGACCC
TAGTGCTGATGGCCAACGCGTCGTGCTCCCTTGGGTATGCTCTTTCCACT
CTCACTGGTCATGATGGCGTAGCAGTGGCGCTGGGACCGGTTTTAATGTT
GCCTATGAGTCTATATGCCGGCGTGCTGCATTCATCAGACCACGTTCCCT
GGTACTTTGTGCCGTTGGACAAGGTTTCCATGATCAAATATGCATTTCAG
GCTATTGTCCTAAACGAGTACGGTTCAGATAAGTACACACCGCAACTCCG
CAACTTCGTATTCGAGTACATCGGCGTGCAGGAAGGGCAAATTGGCTTTT
GTATTGCGATGCTAGTTGTGCTCCTTTTCGGATTCCGCTTCCTTGCTTAC
GTCTTCCTTCTAATTCGAGCAAAGCGAGCATTGATGTAAGATTGTCTGGC
GAGAGCATCATGCTGTAGAATTTTAAATCGACAAATTAAGCATGCTCTAA
ATCAGATGTGTCCTAAAGCACATCGGTATGATCGGCAGCTGCTGTGTGTG
TGGATAAGATCGTGTGTCCAGGACAGCTGTGTATCGTGCAGCATTTGCAC
AACTTTGAGGAAATAACAAGTGGACGAGCTAAATATCGAACCTCATT back to topCoding sequence (CDS) from alignment at CM002459.1:469511..472357- >rna2472 ID=rna2472|Name=rna2472|organism=Nannochloropsis gaditana|type=CDS|length=4116bp|location=Sequence derived from alignment at CM002459.1:469511..472357- (Nannochloropsis gaditana)
TGTGCAAGATCCTCAAGGGATTGGCTGACAGTGGGAGGCTGGTGGCATGC
GTCATCCACCAACCATCATCCGAGATATTTGAGCTTTTCACTCATCTGAT
GCTTCTGGCCAGGGGCCAGACGGCATATTTCGGTACGCGTGCAGGCGGTG
TCGAATATTTCGCATCGATGCTTGGTCTCGAATGCCCGCAATTTTACAAC
CCGGCAGACTACCTGATCGAGAAGCTGGCGGTCAACGTGCTGTTGGAGAA
GCCTGAAGTGGCTGTGGAAGATATGCTACGAGTATATCAGTCGTCGGAAC
TTGCGCGAGATAACGAGGCCTGGATGGCGGACGTGGAGGAGACCGCAGGT
TCAGGAATGGGCGTGGCTGCTCTAGTTTCCAGTCGGGAATTTCCGGCAAC
GTCGTGGACCCAGTTCGTGGAGAGCTACAAGCGCACGGTTAAGTCCTACG
GACGAGAGCCTGTGCTGGCTAAGGTCCGCTTAGGGCAGGCGATCTCGATG
GGGTTGATATTGGGTTTGGTGTATCTGCAGCAGCCGTTTGATTCAAGTGC
TACCAAGAATCGTCTGGGCGCCATGTTCCTGCTAATTATGAATCAAAGCA
TCGCATCCATGTTCACAGTTTCGCAAGTCATTCCCAAGGACATGGCTGTT
TTTATGCGCGAGTATTTGACAAGCGCCAACCGGCCATCGTCCTACTTCCT
GGGCCTTTCTCTTGCAGAGGTCCCGTATCAAGTCCTTTTCCCCTGTATTT
TCGGGTCTATAGCTTACTGGCTAATAGGTTTTGCACCAGAAGCGAGTCGA
TTTTTTATCTTCATCGTGACCCTAGTGCTGATGGCCAACGCGTCGTGCTC
CCTTGGGTATGCTCTTTCCACTCTCACTGGTCATGATGGCGTAGCAGTGG
CGCTGGGACCGGTTTTAATGTTGCCTATGAGTCTATATGCCGGCGTGCTG
CATTCATCAGACCACGTTCCCTGGTACTTTGTGCCGTTGGACAAGGTTTC
CATGATCAAATATGCATTTCAGGCTATTGTCCTAAACGAGTACGGTTCAG
ATAAGTACACACCGCAACTCCGCAACTTCGTATTCGAGTACATCGGCGTG
CAGGAAGGGCAAATTGGCTTTTGTATTGCGATGCTAGTTGTGCTCCTTTT
CGGATTCCGCTTCCTTGCTTACGTCTTCCTTCTAATTCGAGCAAAGCGAG
CATTGATGTAAATGACAGGCACGTCCGACATCGAGCTCGGCAAACTGTCT
AATGCGTCGTCTAATCTCAAGCTCAGCGGGAGCGATGAAGGTCAAAATCG
GAAAGGTTACGACGCGCCAAAACCAAGTTCCGCGACATCATTGCGGTGGA
ATATCCGGAAGCTCAGCGTGCCCATAAAAAGAAAGCACCTCGCCAGACTA
CAGGGCAATTTGGAATTCCTGGGTCAGCAACACGGTTCGGGACGCGATAC
CAATATGCCATTCCGAGGCAACGGGGGCGACGTCCTCACAAACAGTAGGG
CGGGGGGTCGAGGCACCACGAGGGGTACCTCCATCAATGAGAGTCTAGGT
AGTAAGACAGCAGAGCGGCACATTTTATATAATGTGGTCGGACACGCCGA
GAAAGGGCAAATGTTGGCCTTGATGGGGGCGTCAGGAGCCGGCAAGTCAT
CTCTGCTTGATTGCATATCCCTGCGCAACCATCGCTTTGAGGGCTGCGTG
TACTTGGATCGGAATCCGGTAGACACGCACTTTTTCTCGACAAGTGCGTA
CGTACATCAGGTAGACCTCTTTTTCGCGACACTGACAGTCCGAGAGCACC
TGACGTTTCATGCCATGGTGCGTGTGAAGCAGGAAGTGCCGATCGCAGAC
CGTCTACGTAGAGTTGAAGAGGTAATCGATGCAGTCAATTTGACCAAGGT
TGCTGACTCCCTGATCGGCGGACCTCAAGCTTTCATCCGAGGCGTCTCGG
GGGGGGAGCGGAAGCGCCTGTCCGTTGCGACAGAGCTCCTGTCGGACCCG
GAGATCATCTTCGCCGATGAGCCAACTTCAGGTTTGGACGCGTTCATGGC
ACTATCGGTGTGCAAGATCCTCAAGGGATTGGCTGACAGTGGGAGGCTGG
TGGCATGCGTCATCCACCAACCATCATCCGAGATATTTGAGCTTTTCACT
CATCTGATGCTTCTGGCCAGGGGCCAGACGGCATATTTCGGTACGCGTGC
AGGCGGTGTCGAATATTTCGCATCGATGCTTGGTCTCGAATGCCCGCAAT
TTTACAACCCGGCAGACTACCTGATCGAGAAGCTGGCGGTCAACGTGCTG
TTGGAGAAGCCTGAAGTGGCTGTGGAAGATATGCTACGAGTATATCAGTC
GTCGGAACTTGCGCGAGATAACGAGGCCTGGATGGCGGACGTGGAGGAGA
CCGCAGGTTCAGGAATGGGCGTGGCTGCTCTAGTTTCCAGTCGGGAATTT
CCGGCAACGTCGTGGACCCAGTTCGTGGAGAGCTACAAGCGCACGGTTAA
GTCCTACGGACGAGAGCCTGTGCTGGCTAAGGTCCGCTTAGGGCAGGCGA
TCTCGATGGGGTTGATATTGGGTTTGGTGTATCTGCAGCAGCCGTTTGAT
TCAAGTGCTACCAAGAATCGTCTGGGCGCCATGTTCCTGCTAATTATGAA
TCAAAGCATCGCATCCATGTTCACAGTTTCGCAAGTCATTCCCAAGGACA
TGGCTGTTTTTATGCGCGAGTATTTGACAAGCGCCAACCGGCCATCGTCC
TACTTCCTGGGCCTTTCTCTTGCAGAGGTCCCGTATCAAGTCCTTTTCCC
CTGTATTTTCGGGTCTATAGCTTACTGGCTAATAGGTTTTGCACCAGAAG
CGAGTCGATTTTTTATCTTCATCGTGACCCTAGTGCTGATGGCCAACGCG
TCGTGCTCCCTTGGGTATGCTCTTTCCACTCTCACTGGTCATGATGGCGT
AGCAGTGGCGCTGGGACCGGTTTTAATGTTGCCTATGAGTCTATATGCCG
GCGTGCTGCATTCATCAGACCACGTTCCCTGGTACTTTGTGCCGTTGGAC
AAGGTTTCCATGATCAAATATGCATTTCAGGCTATTGTCCTAAACGAGTA
CGGTTCAGATAAGTACACACCGCAACTCCGCAACTTCGTATTCGAGTACA
TCGGCGTGCAGGAAGGGCAAATTGGCTTTTGTATTGCGATGCTAGTTGTG
CTCCTTTTCGGATTCCGCTTCCTTGCTTACGTCTTCCTTCTAATTCGAGC
AAAGCGAGCATTGATGTAAATGACAGGCACGTCCGACATCGAGCTCGGCA
AACTGTCTAATGCGTCGTCTAATCTCAAGCTCAGCGGGAGCGATGAAGGT
CAAAATCGGAAAGGTTACGACGCGCCAAAACCAAGTTCCGCGACATCATT
GCGGTGGAATATCCGGAAGCTCAGCGTGCCCATAAAAAGAAAGCACCTCG
CCAGACTACAGGGCAATTTGGAATTCCTGGGTCAGCAACACGGTTCGGGA
CGCGATACCAATATGCCATTCCGAGGCAACGGGGGCGACGTCCTCACAAA
CAGTAGGGCGGGGGGTCGAGGCACCACGAGGGGTACCTCCATCAATGAGA
GTCTAGGTAGTAAGACAGCAGAGCGGCACATTTTATATAATGTGGTCGGA
CACGCCGAGAAAGGGCAAATGTTGGCCTTGATGGGGGCGTCAGGAGCCGG
CAAGTCATCTCTGCTTGATTGCATATCCCTGCGCAACCATCGCTTTGAGG
GCTGCGTGTACTTGGATCGGAATCCGGTAGACACGCACTTTTTCTCGACA
AGTGCGTACGTACATCAGGTAGACCTCTTTTTCGCGACACTGACAGTCCG
AGAGCACCTGACGTTTCATGCCATGGTGCGTGTGAAGCAGGAAGTGCCGA
TCGCAGACCGTCTACGTAGAGTTGAAGAGGTAATCGATGCAGTCAATTTG
ACCAAGGTTGCTGACTCCCTGATCGGCGGACCTCAAGCTTTCATCCGAGG
CGTCTCGGGGGGGGAGCGGAAGCGCCTGTCCGTTGCGACAGAGCTCCTGT
CGGACCCGGAGATCATCTTCGCCGATGAGCCAACTTCAGGTTTGGACGCG
TTCATGGCACTATCGG back to top
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