EWM28264.1, cds2448 (CDS) Nannochloropsis gaditana

Overview
NameEWM28264.1
Unique Namecds2448
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:421539..421842 +
Alignment locationCM002459.1:421957..423326 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28264.1
Productmethionine aminopeptidase 2b
Orig transcript idgnl|cribi|Naga_100004g92.9195.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:421539..421842 +
CM002459.1supercontigCM002459.1:421957..423326 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0004177aminopeptidase activity
GO:0008235metalloexopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR002468Pept_M24A_MAP2
IPR000994Pept_M24_structural-domain
IPR011991WHTH_DNA-bd_dom
IPR001714Pept_M24_MAP
Homology
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|585110609|gb|EWM28264.1| (methionine aminopeptidase 2b [Nannochloropsis gaditana])

HSP 1 Score: 1146.34 bits (2964), Expect = 0.000e+0
Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0
Query:    1 MGPRVAASQGSYSRVLSGTVGLHKFGMTTTEVKAVHAEAKVQEGAEEEEEEDDDQGGAAEGQGDATTSNGGTANKKKKKKKKKAKSAGTGSAPSETSAAGEECDVEHASGDNDNDAEEDGDGAITAEDAIKKKKKKKKKGVKGASGVSGAVPGQLHPATGVPGKKAPGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            MGPRVAASQGSYSRVLSGTVGLHKFGMTTTEVKAVHAEAKVQEGAEEEEEEDDDQGGAAEGQGDATTSNGGTANKKKKKKKKKAKSAGTGSAPSETSAAGEECDVEHASGDNDNDAEEDGDGAITAEDAIKKKKKKKKKGVKGASGVSGAVPGQLHPATGVPGKKAPGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF
Sbjct:    1 MGPRVAASQGSYSRVLSGTVGLHKFGMTTTEVKAVHAEAKVQEGAEEEEEEDDDQGGAAEGQGDATTSNGGTANKKKKKKKKKAKSAGTGSAPSETSAAGEECDVEHASGDNDNDAEEDGDGAITAEDAIKKKKKKKKKGVKGASGVSGAVPGQLHPATGVPGKKAPGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|299469693|emb|CBN76547.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0
Identity = 305/399 (76.44%), Postives = 344/399 (86.22%), Query Frame = 0
Query:  160 GVPGKKAPGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLE-ADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            G   K AP RGV+GFTDSY+R+GQTEPPTIPV  LF EG FP+GEI  HP D N+FRITSEEKRA ERL+ A LYDK R A+EVHRQVR++AQS+I+PGIKLIDMC  LE KNREL++E GL+ G+ FPTGCSLNHVAAHYTPN GD+TVL++GDVMKVDFG Q+EGRIID A+TVSFDP +D LLEA REAT+TGIR AGIDV L +VG AIQE MESYEV I+GTTYPVKS+RNLNGHSIGPYEIHAGK+VPIVKGGDAT+MEEGEF+AIETFGSTGR  V EDLECSHYMK F AP VPLR+  A++LLSHI++TF TLAFCRRWLERPDGGS  I+G  GKQEKY+GALK LCD G+V  YPPL D++GSYVAQYEHTIL+RPTC EVLSRGDDF
Sbjct:  144 GTGSKVAPARGVTGFTDSYVRHGQTEPPTIPVEDLFEEGSFPEGEILEHPRDFNSFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTMLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGRIIDCAWTVSFDPQFDPLLEAAREATNTGIRNAGIDVPLNEVGAAIQEVMESYEVEINGTTYPVKSVRNLNGHSIGPYEIHAGKNVPIVKGGDATRMEEGEFFAIETFGSTGRGHVVEDLECSHYMKDFNAPRVPLRLPKARQLLSHINKTFGTLAFCRRWLERPDGGSTTINGVSGKQEKYVGALKQLCDSGLVNAYPPLCDVRGSYVAQYEHTILMRPTCVEVLSRGDDF 542          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|676384643|ref|XP_009035600.1| (hypothetical protein AURANDRAFT_71349 [Aureococcus anophagefferens] >gi|323453668|gb|EGB09539.1| hypothetical protein AURANDRAFT_71349 [Aureococcus anophagefferens])

HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0
Identity = 296/397 (74.56%), Postives = 342/397 (86.15%), Query Frame = 0
Query:  163 GKKAP-GRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKG-KQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            G K P  R + GFTDSY+RYGQTEPPTIPV+ LF    FP GEIQ + G  N +R TSEEKRA ER++ DL++KVR ASEVHRQVR+YAQSF++PG+ L +MCE+LENKNREL++E GL  G+GFPTGCS+NH+AAH+TPNAGD TV+Q GDVM +DFG QI+GRIID A+TV+FD  YDNLLEAV++AT+TGIR AG+DVRLCD+GEAI+E MESYE+ +DG T PVK +RNLNGHS+GPY+IHAGKSVPIVKGGDAT+MEEGEFYAIETFGSTGR  V EDLECSHYMK F APHVPLRM  AK+LLSHI++TF TLAFCRRWLER DGGS  ++G  G KQEKYLGALKNLCDVGI+ PYPPL DIKGSYVAQYEHT+LLRPTCKEV+SRGDDF
Sbjct:  623 GSKLPLSRKLGGFTDSYVRYGQTEPPTIPVSKLFER--FPVGEIQDYQG-ANAYRTTSEEKRAQERMQDDLWNKVRHASEVHRQVRRYAQSFVKPGLSLTEMCEKLENKNRELVEERGLTAGIGFPTGCSINHIAAHFTPNAGDTTVIQQGDVMSIDFGTQIDGRIIDCAWTVTFDEKYDNLLEAVKQATETGIREAGVDVRLCDIGEAIEEVMESYELELDGKTLPVKCVRNLNGHSMGPYQIHAGKSVPIVKGGDATRMEEGEFYAIETFGSTGRGHVVEDLECSHYMKNFHAPHVPLRMPRAKKLLSHINKTFGTLAFCRRWLERDDGGSTAVNGASGAKQEKYLGALKNLCDVGIIQPYPPLCDIKGSYVAQYEHTVLLRPTCKEVVSRGDDF 1016          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|1210531231|dbj|GAX10332.1| (methionyl aminopeptidase [Fistulifera solaris])

HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0
Identity = 294/400 (73.50%), Postives = 342/400 (85.50%), Query Frame = 0
Query:  162 PGKKAPGRGV--SGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGG--DATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            P +K P RG+  + FTD Y++YGQT PPTIPV  LF     P GEIQP+  +  ++R TSEE RA +RL+ DLY KVR ASEVHRQVR YAQSFI+PG+KL DMCERLENKNREL+ E GLERG+GFPTGCS+NHVAAHYTPN GD+TVLQY DVMKVDFG Q++GRIIDSA+TVSFDP YDNLL +VR+AT+TG+R AGID RLCD+GEAIQE MESYEV ++GTTYP+K+IRNLNGHSIG Y+IHAGKSVPIVKGG  ++ +MEEGEFYAIETF STGR +V ED+ECSHYMK F+APHVPLRM S+K+LL+HI++TF TLAFCRRWL+R DGGS F++G  GKQEKY+GALKNLCDVGIV PYPPL D+KGS+ AQYEHT  LRPTCKEVLSRGDD+
Sbjct:   53 PSQKPPARGLNETAFTDYYVKYGQTNPPTIPVEDLFKGRQLPLGEIQPY--ESQSYRETSEECRARDRLQEDLYSKVRLASEVHRQVRSYAQSFIKPGVKLADMCERLENKNRELVAERGLERGIGFPTGCSINHVAAHYTPNTGDDTVLQYDDVMKVDFGVQVDGRIIDSAWTVSFDPKYDNLLASVRDATNTGVRLAGIDARLCDIGEAIQEAMESYEVELNGTTYPIKAIRNLNGHSIGQYQIHAGKSVPIVKGGCEESIRMEEGEFYAIETFASTGRGYVIEDMECSHYMKRFDAPHVPLRMQSSKKLLAHINKTFGTLAFCRRWLDREDGGSTFLNGSNGKQEKYMGALKNLCDVGIVQPYPPLCDVKGSFTAQYEHTFFLRPTCKEVLSRGDDY 450          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|1210520617|dbj|GAX20610.1| (methionyl aminopeptidase [Fistulifera solaris])

HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0
Identity = 291/400 (72.75%), Postives = 342/400 (85.50%), Query Frame = 0
Query:  162 PGKKAPGRGV--SGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGG--DATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            P +K P RG+  + FTD Y++YGQT PPTIPV  LF     P GEIQP+  +  ++R TSEE RA +RL+ DLY KVR ASEVHRQVR YAQSFI+PG+KL +MCE+LENKNREL+ E GLERG+GFPTGCS+NHVAAHYTPN GD+TVL+Y DVMKVDFG Q++GRIIDSA+TVSFDP YDNLL +VR+AT+TG+R AG+D RLCD+GEAIQE MESYEV ++GTTYP+K+IRNLNGHSIG Y+IHAGKSVPIVKGG  ++ +MEEGEFYAIETF STGR +V ED+ECSHYMK F+APHVPLRM S+K+LL+HI++TF TLAFCRRWL+R DGGS F++G  GKQEKY+GALKNLCDVGIV PYPPL D+KGSY AQYEHT  LRPTCKEVLSRGDD+
Sbjct:   50 PSQKPPARGLNETAFTDYYVKYGQTHPPTIPVEDLFKGRQLPVGEIQPY-SESQSYRETSEECRARDRLQEDLYAKVRLASEVHRQVRSYAQSFIQPGVKLAEMCEKLENKNRELVAERGLERGIGFPTGCSINHVAAHYTPNTGDDTVLKYDDVMKVDFGVQVDGRIIDSAWTVSFDPKYDNLLASVRDATNTGVRLAGVDARLCDIGEAIQEAMESYEVELNGTTYPIKAIRNLNGHSIGQYQIHAGKSVPIVKGGCEESIRMEEGEFYAIETFASTGRGYVIEDMECSHYMKRFDAPHVPLRMQSSKKLLAHINKTFGTLAFCRRWLDREDGGSTFLNGSNGKQEKYMGALKNLCDVGIVQPYPPLCDVKGSYTAQYEHTFFLRPTCKEVLSRGDDY 448          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|299469694|emb|CBN76548.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0
Identity = 299/399 (74.94%), Postives = 339/399 (84.96%), Query Frame = 0
Query:  160 GVPGKKAPGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLE-ADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            G   K AP RGV+GFTDSY+R+GQTEPPTIPV  LF EG FP+GEI  HP D N+FRITSEEKRA ERL+ A LYDK R A+EVHRQVR++AQS+I+PGIKLIDMC  LE KNREL++E GL+ G+ FPTGCSLNHVAAHYTPN GD+TVL++GDVMKVDFG Q+EG IID A+TVSFDP +D LLEA REAT+ GIR AGIDV L +VG AIQE MESYEV I+GTTYPVKS+RNL GH+IGPY+IHAGKSVPIVKGGD+T+MEEGEF+AIETFGSTGR  V EDLECSHYMK   AP VPLR+  A++LLSHI +TF TLAFCRRWLERPDGGSA I+G  GKQEKY+GALK LCD G+V   PPL D++GSYVAQYEHTIL+RPTC EVLSRGDDF
Sbjct:  127 GTGSKVAPARGVTGFTDSYVRHGQTEPPTIPVEDLFEEGSFPEGEILEHPRDFNSFRITSEEKRAEERLQYAGLYDKARKAAEVHRQVRRHAQSYIKPGIKLIDMCTTLEEKNRELVRENGLDAGIAFPTGCSLNHVAAHYTPNNGDDTVLKHGDVMKVDFGTQVEGHIIDCAWTVSFDPQFDPLLEAAREATNAGIRNAGIDVPLNEVGAAIQEVMESYEVEINGTTYPVKSMRNLTGHNIGPYDIHAGKSVPIVKGGDSTRMEEGEFFAIETFGSTGRGHVVEDLECSHYMKDINAPRVPLRLPKARQLLSHISKTFGTLAFCRRWLERPDGGSATINGVSGKQEKYVGALKQLCDSGLVNALPPLCDVRGSYVAQYEHTILMRPTCVEVLSRGDDF 525          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|224007972|ref|XP_002292945.1| (methionine aminopeptidase 2 [Thalassiosira pseudonana CCMP1335] >gi|220971071|gb|EED89406.1| methionine aminopeptidase 2 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 625.165 bits (1611), Expect = 0.000e+0
Identity = 289/394 (73.35%), Postives = 332/394 (84.26%), Query Frame = 0
Query:  172 SGFTDSYIRYGQTEPPTIPVASLF--------AEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            S FTD Y+ +GQTEPPTIPV++LF            FP GEIQ HP + N+ RI+SEE R  ERL A+LY K+R ASEVHRQVR YAQSFI+PGIKL+DMCERLE  NR L+QE GLERG+GFPTGCS+NHVAAHYTPN GD TVLQY DVMKVDFG QI+GRIID A+TVSF+P YD LLEAV+EAT+ GIR AGIDVRLCDVGE++QE MESYEV +DG TYPVK IRNLNGHSIGPY+IHAGKSVPIVK  D TKMEEGE +AIETFG+TGR ++ ED+ECSHYMK F+ PH+PLR+  +K+LL+HI+ TF TLAFCRRWLER DGGS  ++G KGKQEKY+GALKNLCDVGI+ PYPPLVD+KGSY AQYEHT++LRPTCKE+LSRGDDF
Sbjct:   42 SSFTDYYVAHGQTEPPTIPVSNLFKGEDTPSSPLPPFPTGEIQHHPLESNSHRISSEELRHNERLSANLYSKLRHASEVHRQVRHYAQSFIQPGIKLVDMCERLEECNRNLVQEKGLERGIGFPTGCSINHVAAHYTPNCGDNTVLQYDDVMKVDFGTQIDGRIIDCAWTVSFNPRYDPLLEAVKEATNAGIRAAGIDVRLCDVGESVQEVMESYEVELDGKTYPVKCIRNLNGHSIGPYQIHAGKSVPIVKTDDVTKMEEGEIFAIETFGTTGRGYIVEDMECSHYMKNFDCPHIPLRIPRSKKLLAHINNTFGTLAFCRRWLERDDGGSFTVNGAKGKQEKYMGALKNLCDVGIIQPYPPLVDVKGSYTAQYEHTLILRPTCKEILSRGDDF 435          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|1173955281|gb|OQS02276.1| (methionine aminopeptidase [Thraustotheca clavata])

HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0
Identity = 290/391 (74.17%), Postives = 335/391 (85.68%), Query Frame = 0
Query:  167 PGRGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            P RGV GFTDSYI+YGQTEPPTIPV+ LFA G FPKGE QPHPGD NT+R TSEEKRA ER    LYD++R ASEVHRQVRK+AQS I+PGI+LIDMCE LENKNREL++EAG  RG+GFPTGCSLNH+AAHYTPN GD+TVL+YGDVMK+DFG Q++GRIIDSAFTV+FDP +DNLL A + AT+ G++ +GID RL ++G AI+E MESYEVTI+G TYPVK IRNLNGHSIGPY+IHAGKSVPIVK  + TKMEEGE +AIETFGSTGR FV ED ECSHY KAF+APHVPLR+  AK+LLSHI+RTF TL FCRR++ER DGGSA I+ +  KQEKY+ ALKNL D GIV  YPPLVD+ GSY AQYEHTI+L+PTCKEV+SRGDD+
Sbjct:   60 PFRGVGGFTDSYIKYGQTEPPTIPVSKLFAVGSFPKGEEQPHPGDFNTYRTTSEEKRALERENEALYDRMRYASEVHRQVRKFAQSIIKPGIRLIDMCEALENKNRELVEEAGFARGIGFPTGCSLNHIAAHYTPNTGDDTVLKYGDVMKLDFGTQVDGRIIDSAFTVAFDPQFDNLLAAAKAATEEGVKVSGIDARLGEIGGAIEEVMESYEVTIEGKTYPVKCIRNLNGHSIGPYQIHAGKSVPIVKTAEDTKMEEGEIFAIETFGSTGRGFVVEDGECSHYAKAFDAPHVPLRLPRAKKLLSHINRTFGTLPFCRRFMEREDGGSATINPKGAKQEKYMVALKNLVDNGIVTAYPPLVDVVGSYTAQYEHTIILKPTCKEVVSRGDDY 450          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|397631768|gb|EJK70282.1| (hypothetical protein THAOC_08372 [Thalassiosira oceanica])

HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0
Identity = 292/416 (70.19%), Postives = 342/416 (82.21%), Query Frame = 0
Query:  160 GVPGKKAPGRGVS--GFTDSYIRYGQTEPPTIPVASLF-----------AEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKS-----IRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            G P  KA GR ++   FTD Y+ +GQTEPPT+PV +LF               FP+GEIQ HP + N+ R++SEE RAA+RL+ DLYDK+R ASEVHRQVR +AQSFI+PGIKLIDMCERLE  NR L+QE GLERG+GFPTGCSLNHVAAHYTPN+GD+TVL Y DVMKVDFG QI+GRIID A+TVSF+P YD LLEAV+EAT+ GI+ AGIDVRLCD+GE++QE MESYEV ++G TYPVK+     IRNLNGHS+GPY IHAGKSVPIVK  D TKMEE E +AIETFGSTGR ++ ED+ECSHYMK F APHVPLR+  AK+LL+HI++TF TLAFCRRWLER DGGSA ++ Q G+QEKYLGALKNLCDVGIV PYPPLVD+KG Y AQYEHT++LRPTCKE+LSRGDD+
Sbjct:   65 GTPSNKAEGRFLNEGSFTDYYVAHGQTEPPTLPVVNLFRGEDDEDPSRKGLPTFPQGEIQEHPLESNSHRVSSEELRAADRLQQDLYDKLRHASEVHRQVRHHAQSFIKPGIKLIDMCERLEETNRRLVQECGLERGIGFPTGCSLNHVAAHYTPNSGDDTVLSYDDVMKVDFGTQIDGRIIDCAWTVSFNPKYDPLLEAVKEATNAGIKAAGIDVRLCDIGESVQEVMESYEVELEGKTYPVKATYHKCIRNLNGHSMGPYHIHAGKSVPIVKCDDQTKMEENEIFAIETFGSTGRGYIVEDMECSHYMKNFHAPHVPLRVPRAKKLLAHINKTFGTLAFCRRWLEREDGGSATVNKQGGRQEKYLGALKNLCDVGIVQPYPPLVDVKGCYTAQYEHTLILRPTCKEILSRGDDY 480          
BLAST of EWM28264.1 vs. NCBI_GenBank
Match: gi|698795078|ref|XP_009830568.1| (methionine aminopeptidase, type II [Aphanomyces astaci] >gi|574114144|gb|ETV79632.1| methionine aminopeptidase, type II [Aphanomyces astaci])

HSP 1 Score: 619.387 bits (1596), Expect = 0.000e+0
Identity = 290/397 (73.05%), Postives = 331/397 (83.38%), Query Frame = 0
Query:  162 PGKKAPG-RGVSGFTDSYIRYGQTEPPTIPVASLFAEGHFPKGEIQPHPGDMNTFRITSEEKRAAERLEADLYDKVRSASEVHRQVRKYAQSFIEPGIKLIDMCERLENKNRELIQEAGLERGVGFPTGCSLNHVAAHYTPNAGDETVLQYGDVMKVDFGCQIEGRIIDSAFTVSFDPTYDNLLEAVREATDTGIRTAGIDVRLCDVGEAIQETMESYEVTIDGTTYPVKSIRNLNGHSIGPYEIHAGKSVPIVKGGDATKMEEGEFYAIETFGSTGRAFVQEDLECSHYMKAFEAPHVPLRMASAKRLLSHIDRTFKTLAFCRRWLERPDGGSAFIHGQKGKQEKYLGALKNLCDVGIVVPYPPLVDIKGSYVAQYEHTILLRPTCKEVLSRGDDF 557
            PG K P  RGV+GFTDSYI+YGQTEPPTIPVA LFA G FPKGE Q HPGD NT+RITSEE RAAER     YD+VR ASEVHRQVRK+AQ  I+PGI+LID+CE LENKNREL++EAG  RG+GFPTGCSLNHVAAHYTPNAGD TVL Y DVMK+DFG Q++GRIIDSAFTV+FDP +D LL A + AT+ G+R +GID RL ++G AIQE MESYEVTI+G  YPV+ IRNLNGHSIGPY+IHAGKSVPIV   + TKMEEGE +AIETF +TGR +V ED+ECSHY KAF+APHVPLR+  AK+LLSHI RTF TL FCRRWLER DGGS+FI+ +  KQEKY+  LKNL D GIV  YPPL DIKGSY +QYEHT++LRPTCKEVLSRGDD+
Sbjct:   59 PGTKLPPFRGVTGFTDSYIQYGQTEPPTIPVAKLFAVGSFPKGEEQNHPGDFNTYRITSEELRAAERENEAFYDRVRYASEVHRQVRKFAQGLIKPGIRLIDLCEALENKNRELVEEAGFARGIGFPTGCSLNHVAAHYTPNAGDHTVLTYNDVMKIDFGTQVDGRIIDSAFTVAFDPQFDPLLAASKAATNEGVRQSGIDARLGEIGAAIQEVMESYEVTINGKVYPVQCIRNLNGHSIGPYQIHAGKSVPIVATPEQTKMEEGEIFAIETFNTTGRGYVVEDMECSHYAKAFDAPHVPLRLPRAKKLLSHIQRTFGTLPFCRRWLEREDGGSSFINPKGAKQEKYIMGLKNLVDNGIVTAYPPLCDIKGSYTSQYEHTLILRPTCKEVLSRGDDY 455          
The following BLAST results are available for this feature:
BLAST of EWM28264.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110609|gb|EWM28264.1|0.000e+0100.00methionine aminopeptidase 2b [Nannochloropsis gadi... [more]
gi|299469693|emb|CBN76547.1|0.000e+076.44conserved unknown protein [Ectocarpus siliculosus][more]
gi|676384643|ref|XP_009035600.1|0.000e+074.56hypothetical protein AURANDRAFT_71349 [Aureococcus... [more]
gi|1210531231|dbj|GAX10332.1|0.000e+073.50methionyl aminopeptidase [Fistulifera solaris][more]
gi|1210520617|dbj|GAX20610.1|0.000e+072.75methionyl aminopeptidase [Fistulifera solaris][more]
gi|299469694|emb|CBN76548.1|0.000e+074.94conserved unknown protein [Ectocarpus siliculosus][more]
gi|224007972|ref|XP_002292945.1|0.000e+073.35methionine aminopeptidase 2 [Thalassiosira pseudon... [more]
gi|1173955281|gb|OQS02276.1|0.000e+074.17methionine aminopeptidase [Thraustotheca clavata][more]
gi|397631768|gb|EJK70282.1|0.000e+070.19hypothetical protein THAOC_08372 [Thalassiosira oc... [more]
gi|698795078|ref|XP_009830568.1|0.000e+073.05methionine aminopeptidase, type II [Aphanomyces as... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2456rna2456Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications