EWM28171.1, cds2447 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|585110516|gb|EWM28171.1| (katanin p60 atpase-containing subunit a 1 [Nannochloropsis gaditana]) HSP 1 Score: 1347.41 bits (3486), Expect = 0.000e+0 Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0
Query: 1 MADAANKSSLPGSNTLQSSTNTAENASATIKAAATLPSIPSAVKKLPLLLRQAREHGLLSQYEAAIQLHRKAQQVLQEFANVTLKSDDQEWRRNRYLKLAKELKAEEALVNELQNTLRSIPPVPPSNKPRPPSPPPPLSAAAAASKREAAALAASQLPDSEIAREPGVWEAPTPPTTSRRSKASVGGREGGMRTHRQSLGVGGKETAEGRRVAAASTRKLGSNRRTSQAGARPATVTSSSAAAVAGRAEGTRTRTSVKPPVPVTVNTASSSSGARRNAGRGVNATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNGKPRYSDVAREAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
MADAANKSSLPGSNTLQSSTNTAENASATIKAAATLPSIPSAVKKLPLLLRQAREHGLLSQYEAAIQLHRKAQQVLQEFANVTLKSDDQEWRRNRYLKLAKELKAEEALVNELQNTLRSIPPVPPSNKPRPPSPPPPLSAAAAASKREAAALAASQLPDSEIAREPGVWEAPTPPTTSRRSKASVGGREGGMRTHRQSLGVGGKETAEGRRVAAASTRKLGSNRRTSQAGARPATVTSSSAAAVAGRAEGTRTRTSVKPPVPVTVNTASSSSGARRNAGRGVNATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNGKPRYSDVAREAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV
Sbjct: 1 MADAANKSSLPGSNTLQSSTNTAENASATIKAAATLPSIPSAVKKLPLLLRQAREHGLLSQYEAAIQLHRKAQQVLQEFANVTLKSDDQEWRRNRYLKLAKELKAEEALVNELQNTLRSIPPVPPSNKPRPPSPPPPLSAAAAASKREAAALAASQLPDSEIAREPGVWEAPTPPTTSRRSKASVGGREGGMRTHRQSLGVGGKETAEGRRVAAASTRKLGSNRRTSQAGARPATVTSSSAAAVAGRAEGTRTRTSVKPPVPVTVNTASSSSGARRNAGRGVNATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNGKPRYSDVAREAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|676382451|ref|XP_009034504.1| (hypothetical protein AURANDRAFT_21746, partial [Aureococcus anophagefferens] >gi|323455066|gb|EGB10935.1| hypothetical protein AURANDRAFT_21746, partial [Aureococcus anophagefferens]) HSP 1 Score: 474.167 bits (1219), Expect = 4.764e-161 Identity = 228/327 (69.72%), Postives = 267/327 (81.65%), Query Frame = 0
Query: 334 DTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGS 660
D ELIE IER+IVE GV+V+WD IA+L+EAKQLLQEAVVLPLWMPD+F+GIRRPWKGVL+FGPPGTGKTMLAKAVA EC TTFFNVSASTL SK+RG+SEKMVR+LF+MAR++APST+FFDEIDS+AG RGG+ EHEASRRVKTELMVQMDGVA S D E A +TVIVLAATN PW+LD+ALRRR+EKRIYI LPT GR LF INM+ ++V DD++LD LA +T+GYSGAD+ANVCRDA+MMSVRRVME AR +GL G E+Q+ L ANR +QA V+ DFL A+ K+ SVGS DLQ+Y DW EFG+
Sbjct: 1 DVELIEGIERDIVETGVSVTWDEIAELKEAKQLLQEAVVLPLWMPDFFRGIRRPWKGVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLSSKWRGESEKMVRLLFDMARWHAPSTVFFDEIDSLAGQRGGANEHEASRRVKTELMVQMDGVAGGSGDAPEDAGAEAA--------PRTVIVLAATNTPWELDEALRRRLEKRIYIPLPTAAGRAALFEINMKSVDVADDVELDDLAAKTDGYSGADVANVCRDAAMMSVRRVMEAARAKGLSGAEMQRELAANRGAMQAD-VSMEDFLNAIRKVRGSVGSADLQKYRDWSDEFGA 318
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|299117006|emb|CBN73777.1| (putative; katanin like protein [Ectocarpus siliculosus]) HSP 1 Score: 474.552 bits (1220), Expect = 1.175e-154 Identity = 264/422 (62.56%), Postives = 315/422 (74.64%), Query Frame = 0
Query: 264 TVNTASSSSGA--RRNAGRGVNATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNG---KPRYSDVAREAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEE--------------------GAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGS 660
+V+ A ++ G R+ G A A +AG A ++ + ++ + +PP A+ G +PRYSD+ARE GWAD ELIES+ER+IVE+GV+V+WD IADL++AKQLLQEAVVLPLWMPDYFKGIRRPWKGVL+FGPPGTGKTMLAKAVA EC TTFFNVSASTLGSKYRG+SEKMVR+LFEMARYYAPST+FFDEIDS+AGSRG GEHEASRRVKTELMVQMDGV ++ GA SKTVIVLAATN PW LD+ALRRR+EKRIYI LPTE GRKELFRIN+ D+EV DD+DLD LA T+GYSGAD+A VCRDA+MMSVRRVM+ A ++GL G EIQK +M +D+L A+ VT DF +L K+SKSVG DL +Y++WM+EFGS
Sbjct: 359 SVDPARAAGGGSRRQQQQHGAGAAAPTSAG-RAEGREGRRGWAPEAKRQGSPP-AVTGPAQQPRYSDLAREEGWADRELIESLERDIVERGVSVTWDQIADLKDAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLMFGPPGTGKTMLAKAVAAECKTTFFNVSASTLGSKYRGESEKMVRVLFEMARYYAPSTIFFDEIDSLAGSRGSDGEHEASRRVKTELMVQMDGVTGGGGGDGSSPGDQGSDEAGGGGGGGGSGDGGGDGASGHGGGASSKTVIVLAATNTPWSLDEALRRRLEKRIYIPLPTEVGRKELFRINLGDVEVDDDVDLDALAGLTDGYSGADVAIVCRDAAMMSVRRVMKGALERGLSGPEIQKHVMEMKDEL-AAAVTMEDFRSSLRKVSKSVGQADLDKYDEWMKEFGS 777
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|1025117432|ref|XP_016412079.1| (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 429.098 bits (1102), Expect = 3.607e-142 Identity = 228/417 (54.68%), Postives = 290/417 (69.54%), Query Frame = 0
Query: 250 GTRTRTSVKPPVPVTVNTASSSSGARRN--AGRGVNATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNGKPRYSDVAR---EAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
G R VK P+ V+ S G + GRG P ++ N+ +S ++A+D N + +DV + + D++L++++ER+IV + N+ WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL+VQMDGV G E + P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT +GR L +IN+R++EV D+DL +A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF AL KISKSV + DL++Y WM EFGSV
Sbjct: 12 GHRGPVQVKKPITVSKPQRKESPGLQHRGPVGRG---------QPNVKSERLNTRDSRGNKAKDEKSKK-NAQEGAADVEQRKFDGTGYDSDLVDALERDIVSRNPNIHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLSSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGV--------------GGAQENDDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAQGRAALLKINLREVEVASDVDLTLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFELALKKISKSVSAADLEKYESWMSEFGSV 394
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|1039383507|ref|XP_017159237.1| (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 isoform X2 [Poecilia reticulata]) HSP 1 Score: 429.098 bits (1102), Expect = 6.076e-141 Identity = 225/412 (54.61%), Postives = 287/412 (69.66%), Query Frame = 0
Query: 259 PPVPV------TVNTASSSSGARRNAGRGVN---ATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNGKPRYSDVAREAGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
PP+PV V +S+ R G+ A A P A Q + ++ + + + + PLA + ++ D++L++S+ER+IV + NV WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV G E + P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT GR EL +IN+R++E+ D++LD +A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF L KISKSV + DL++Y WM EFGSV
Sbjct: 99 PPIPVEHRNPVVVKRPNSAIKQHRKESPGMQHRGAGGRVHANPKAERQANRATKAKDDKGKKVDPLAEGEQKKFDGTG-----YDSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGV--------------GGALENDDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVELAPDVNLDXIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFTTTLKKISKSVSAADLEKYESWMAEFGSV 481
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|55925351|ref|NP_001007432.1| (katanin p60 ATPase-containing subunit A-like 1 [Danio rerio] >gi|82232967|sp|Q5U3S1.1|KATL1_DANRE RecName: Full=Katanin p60 ATPase-containing subunit A-like 1; Short=Katanin p60 subunit A-like 1; AltName: Full=p60 katanin-like 1 >gi|55250013|gb|AAH85416.1| Zgc:101696 [Danio rerio]) HSP 1 Score: 428.713 bits (1101), Expect = 9.600e-141 Identity = 226/414 (54.59%), Postives = 285/414 (68.84%), Query Frame = 0
Query: 252 RTRTSVKPPVPVTVNTASSSSGARRNAGRGVNATAVDTAGPYATLQKHNSSNSANSRAEDTPPLALNGKPRYSDVARE----AGWADTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
R VK PVP++ S G + G + P + N + S+ N + +DV ++ G+ D++L++++ER+IV + N+ WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL+VQMDGV G E E P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT +GR EL +IN+R+++V D+DL A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF AL KISKSV + DL++Y WM EFGSV
Sbjct: 108 RGPVQVKKPVPLSKPQRKESPGMQHRGAVGRGQANIKPDRPNTRDGRGNKAKEEKSKR--------NAQEGAADVEQKKFDGTGY-DSDLVDALERDIVSRNPNIHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGV--------------GGAQESEDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVDVASDVDLTVFAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFELALKKISKSVSAADLEKYESWMSEFGSV 488
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|657525244|ref|XP_008279890.1| (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 [Stegastes partitus]) HSP 1 Score: 429.098 bits (1102), Expect = 9.608e-141 Identity = 212/328 (64.63%), Postives = 258/328 (78.66%), Query Frame = 0
Query: 334 DTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
D++L++S+ER+IV + NV WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL++QMDGV G E + P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT GR EL +IN+R++EV DD+DLD +A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF L KISKSV + DL++Y WM EFGSV
Sbjct: 187 DSDLVDSLERDIVSRNPNVHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLIQMDGV--------------GGALENDDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAVGRVELLKINLREVEVADDVDLDLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFTLTLKKISKSVSAADLEKYEAWMAEFGSV 490
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|966655487|gb|KTF90341.1| (hypothetical protein cypCar_00014243 [Cyprinus carpio]) HSP 1 Score: 428.713 bits (1101), Expect = 1.117e-140 Identity = 210/328 (64.02%), Postives = 258/328 (78.66%), Query Frame = 0
Query: 334 DTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
D++L++++ER+IV + N+ WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL+VQMDGV G E + P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT +GR EL +IN+R++EV D+DL +A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF AL KISKSV + DL++Y WM EFGSV
Sbjct: 185 DSDLVDALERDIVSRNPNIHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGV--------------GGAQENDDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAQGRAELLKINLREVEVAPDVDLTLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFKLALKKISKSVSAADLEKYESWMSEFGSV 488
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|1024950712|ref|XP_016296068.1| (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 [Sinocyclocheilus anshuiensis]) HSP 1 Score: 428.713 bits (1101), Expect = 1.154e-140 Identity = 210/328 (64.02%), Postives = 258/328 (78.66%), Query Frame = 0
Query: 334 DTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
D++L++++ER+IV + N+ WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL+VQMDGV G E + P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT +GR EL +IN+R++EV D+DL +A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF AL KISKSV + DL++Y WM EFGSV
Sbjct: 185 DSDLVDALERDIVSRNPNIHWDGIADLEDAKKLLKEAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGV--------------GGAQESDDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAQGRAELLKINLREVEVASDVDLTLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFELALKKISKSVSAADLEKYESWMSEFGSV 488
BLAST of EWM28171.1 vs. NCBI_GenBank
Match: gi|1020406776|ref|XP_016119550.1| (PREDICTED: katanin p60 ATPase-containing subunit A-like 1 [Sinocyclocheilus grahami] >gi|1020406778|ref|XP_016119556.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 1 [Sinocyclocheilus grahami]) HSP 1 Score: 428.328 bits (1100), Expect = 1.372e-140 Identity = 210/328 (64.02%), Postives = 258/328 (78.66%), Query Frame = 0
Query: 334 DTELIESIEREIVEQGVNVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTGKTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPSTLFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEEGAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKELFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEEARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQRYNDWMQEFGSV 661
D++L++++ER+IV + N+ WD IADL++AK+LL+EAVVLP+WMPD+FKGIRRPWKGVL+ GPPGTGKTMLAKAVATEC TTFFNVS+STL SKYRG+SEK+VR+LFEMAR+YAP+T+F DEIDSI G RG S EHEASRRVK+EL+VQMDGV G E + P SK V+VLAATN PWD+D+ALRRR+EKRIYI LPT +GR EL +IN+R++EV D+DL +A++ EGYSGADI NVCRDASMM++RR R QGL EI +AL ++D+LQ VT DF AL KISKSV + DL++Y WM EFGSV
Sbjct: 185 DSDLVDALERDIVSRNPNIHWDDIADLEDAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGV--------------GGAQENDDP-SKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAQGRAELLKINLREVEVASDVDLTLIAEKIEGYSGADITNVCRDASMMAMRR-----RIQGLSPEEI-RAL--SKDELQMP-VTMEDFELALKKISKSVSAADLEKYESWMSEFGSV 488 The following BLAST results are available for this feature:
BLAST of EWM28171.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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