|
|
Properties
| Property Name | Value |
|---|
| Product | katanin p60 atpase-containing subunit a 1 |
| Orig transcript id | gnl|cribi|Naga_100004g91.9102.mrna |
| Orig protein id | gnl|cribi|Naga_100004g91.9102 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:418966..421294 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2455 ID=rna2455|Name=rna2455|organism=Nannochloropsis gaditana|type=mRNA|length=687bp
ATGCCCTCTCCTCCCATTCGGACACAGGTTGATGCCGGAATGAAAAGTGT
ACTGGTCCATGGGCTTACTGGCGGCATCGCTTCAGGGAAGACCCACGCCT
GCAGTGTCTTGAGAGGCCTTGGCGCAACGGTCCTAAATGCCGACCTATTG
GCTCACGCGTGCTATGCCCCTCACACGCCCGCCAACCAGCAACTCCGTAA
GGCCTTCGGACCCAGCATTTTTACCACCGATGGCCGCGTGGACAGGAAGA
AACTCGGCAAGCTCGTGTTCCAGCGCGACCACAGGTCGCTCCAACAATTA
AACAAGATCATGTTTCCTGCCACAGAGGCGCGGGCGAAGGAGGAGATTGC
CCGCCTGACGACGGAGGGCCACGCGTGGGTGGTGGTGGAGGCGGCCGTCT
TGGTCGAGGCAGGGTGGGACTTGTGGATGGATGAGGTCTGGACGATGCTG
ATCGACCCTAAGTTGGCGCAAGCACGATTAATGGACCGAGACGGGATGAC
CGCAGAGGAAGCGCAGAGGAGAATAGCGGCTCTTGCGAGCAATGAGGTGA
GAAACAAGGCGGCGACGCTTCTGATCGACTCGAGCGGTAGCAAAGAGCAG
ACGGCAGCAAAGTTAAGGGTGGCAGCCAAAGACCTCAAACGTCGTGTGAA
AGATGTGCATAATTTGGACTTACCACTGACAATCTGA back to topprotein sequence of rna2455 >rna2455-protein ID=rna2455-protein|Name=rna2455|organism=Nannochloropsis gaditana|type=polypeptide|length=661bp
MADAANKSSLPGSNTLQSSTNTAENASATIKAAATLPSIPSAVKKLPLLL
RQAREHGLLSQYEAAIQLHRKAQQVLQEFANVTLKSDDQEWRRNRYLKLA
KELKAEEALVNELQNTLRSIPPVPPSNKPRPPSPPPPLSAAAAASKREAA
ALAASQLPDSEIAREPGVWEAPTPPTTSRRSKASVGGREGGMRTHRQSLG
VGGKETAEGRRVAAASTRKLGSNRRTSQAGARPATVTSSSAAAVAGRAEG
TRTRTSVKPPVPVTVNTASSSSGARRNAGRGVNATAVDTAGPYATLQKHN
SSNSANSRAEDTPPLALNGKPRYSDVAREAGWADTELIESIEREIVEQGV
NVSWDSIADLQEAKQLLQEAVVLPLWMPDYFKGIRRPWKGVLLFGPPGTG
KTMLAKAVATECATTFFNVSASTLGSKYRGDSEKMVRILFEMARYYAPST
LFFDEIDSIAGSRGGSGEHEASRRVKTELMVQMDGVADASATTSVDDNEE
GAVDEEERPGSKTVIVLAATNMPWDLDDALRRRMEKRIYISLPTEEGRKE
LFRINMRDIEVGDDLDLDTLAQQTEGYSGADIANVCRDASMMSVRRVMEE
ARKQGLHGLEIQKALMANRDKLQASMVTQADFLFALSKISKSVGSGDLQR
YNDWMQEFGSV back to topmRNA from alignment at CM002459.1:418966..421294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2455 ID=rna2455|Name=rna2455|organism=Nannochloropsis gaditana|type=mRNA|length=2329bp|location=Sequence derived from alignment at CM002459.1:418966..421294- (Nannochloropsis gaditana)
ATGGCCGATGCTGCGAATAAATCAAGCCTTCCTGGCTCAAATACCCTTCA
ATCAAGTACAAATACCGCTGAAAATGCTAGTGCAACAATTAAGGCGGCAG
CCACTCTGCCCTCGATTCCTTCGGCAGTGAAAAAACTTCCGCTGTTGCTT
CGCCAAGCCCGGGAACACGGCTTGCTTTCCCAGTACGAGGCGGCCATCCA
ACTTCACCGAAAGGCGCAGCAAGTACTGCAGGAGTTTGCAAACGTAACCT
TGAAATCGGATGATCAGGAGTGGCGTCGAAATAGATACCTCAAGCTGGCC
AAGGAGCTCAAGGCTGAGGAAGCTTTGGTAAATGAGCTGCAAAACACCCT
ACGTTCCATTCCTCCCGTTCCGCCCAGTAATAAGCCCCGGCCTCCATCTC
CCCCTCCGCCGCTTTCGGCCGCTGCCGCAGCCAGCAAGAGGGAAGCAGCG
GCTCTCGCAGCATCACAGTTGCCTGATTCTGAAATTGCACGCGAACCCGG
AGTTTGGGAAGCACCAACGCCGCCGACCACATCCCGCCGCTCCAAAGCCT
CTGTGGGCGGGAGAGAGGGCGGTATGCGCACACACCGGCAATCTCTTGGC
GTTGGGGGAAAAGAAACCGCCGAAGGGAGGCGTGTCGCAGCTGCTTCGAC
CAGAAAATTAGGTTCAAACCGGCGGACGTCACAGGCAGGTGCCCGTCCGG
CCACTGTAACAAGCTCGTCGGCGGCGGCTGTGGCTGGGCGCGCCGAGGGT
ACCCGGACACGCACCTCGGTCAAACCTCCGGTTCCCGTGACTGTGAATAC
CGCTTCTTCTAGCTCCGGTGCGAGGCGTAACGCGGGGCGTGGCGTCAATG
CTACTGCAGTGGACACTGCGGGCCCCTACGCCACCCTTCAGAAGCACAAC
TCGAGCAATTCTGCGAATAGCAGGGCAGAGGACACGCCCCCCCTGGCTTT
GAATGGAAAACCAAGATACAGCGATGTAGCCCGGGAGGCAGGATGGGCAG
ACACGGAGCTTATTGAAAGCATCGAGCGGGAGATCGTGGAGCAGGGAGTG
AATGTCTCCTGGGACTCTATCGCTGATTTACAAGAGGCGAAACAGCTTTT
GCAAGAAGCAGTTGTATTGCCATTGTGGATGCCTGACTATTTCAAGGGCA
TTCGGCGGCCATGGAAGGGGGTCTTGTTGTTCGGGTATGTAGGCATGAGT
GGGTGGGGCGGAAGCATCTCAGGTCCGGCTGGAGGACCTGAAAGCCAACA
AATCGAAGCGCGCAGAAAGTAGGAATCATGAACAGCCCTTCAACACATTT
CGGCAGGGCGCTCACGAGTGTCTTCTCCCTTCGCCCTTTTCACACACAGG
CCTCCAGGGACGGGGAAGACCATGCTGGCCAAGGCTGTTGCCACGGAGTG
TGCCACCACGTTCTTCAATGTCTCCGCGTCCACTCTCGGCTCTAAGGTAG
AGTTTATCTCATAAGTTTTGTATAGTTTTAACCGTGTATCCCTCGCAGGT
TCTCGTTTCCGTCCCCCTTCATGCCCACAAGCTTCCGGACCATTTAGCTT
GTGTTCTTGTTTCATTATGTCATCGTTTTTCGCGACCACTCATTGCCTCC
AAAACCTTTCCGCTACCTCATCAGTACCGAGGTGACAGCGAAAAAATGGT
TCGAATCCTTTTTGAAATGGCGAGATACTACGCCCCATCCACGCTCTTCT
TCGACGAGATCGATTCTATCGCCGGGTCGCGCGGGGGCAGCGGCGAGCAC
GAGGCGAGTCGGCGCGTCAAGACAGAACTCATGGTTCAGATGGATGGTGT
AGCGGACGCCTCAGCCACGACCAGCGTAGATGATAACGAGGAGGGAGCGG
TGGACGAGGAGGAGAGGCCTGGAAGCAAAACAGTCATCGTCCTGGCAGCC
ACCAACATGCCGTGGGATCTAGATGATGCTTTGCGACGGCGAATGGAGAA
GAGAATCTATATTTCGCTGCCTACCGAAGAAGGACGGAAAGAATTATTCA
GAATCAATATGAGGGATATTGAGGTGGGGGATGATTTGGATTTGGATACC
CTAGCTCAGCAAACGGAAGGATACTCTGGTGCAGACATTGCGAACGTGTG
TCGAGACGCCTCGATGATGAGTGTGCGGCGGGTGATGGAGGAAGCAAGGA
AACAGGGACTACATGGCTTGGAGATTCAGAAGGCATTGATGGCAAACCGA
GACAAACTCCAGGCGTCGATGGTCACGCAAGCTGATTTCTTGTTTGCGTT
ATCGAAAATCAGCAAGTCCGTGGGCTCAGGGGATTTGCAGCGGTACAACG
ACTGGATGCAGGAATTCGGCAGTGTGTAG back to topCoding sequence (CDS) from alignment at CM002459.1:418966..421294- >rna2455 ID=rna2455|Name=rna2455|organism=Nannochloropsis gaditana|type=CDS|length=5958bp|location=Sequence derived from alignment at CM002459.1:418966..421294- (Nannochloropsis gaditana)
TACCGAGGTGACAGCGAAAAAATGGTTCGAATCCTTTTTGAAATGGCGAG
ATACTACGCCCCATCCACGCTCTTCTTCGACGAGATCGATTCTATCGCCG
GGTCGCGCGGGGGCAGCGGCGAGCACGAGGCGAGTCGGCGCGTCAAGACA
GAACTCATGGTTCAGATGGATGGTGTAGCGGACGCCTCAGCCACGACCAG
CGTAGATGATAACGAGGAGGGAGCGGTGGACGAGGAGGAGAGGCCTGGAA
GCAAAACAGTCATCGTCCTGGCAGCCACCAACATGCCGTGGGATCTAGAT
GATGCTTTGCGACGGCGAATGGAGAAGAGAATCTATATTTCGCTGCCTAC
CGAAGAAGGACGGAAAGAATTATTCAGAATCAATATGAGGGATATTGAGG
TGGGGGATGATTTGGATTTGGATACCCTAGCTCAGCAAACGGAAGGATAC
TCTGGTGCAGACATTGCGAACGTGTGTCGAGACGCCTCGATGATGAGTGT
GCGGCGGGTGATGGAGGAAGCAAGGAAACAGGGACTACATGGCTTGGAGA
TTCAGAAGGCATTGATGGCAAACCGAGACAAACTCCAGGCGTCGATGGTC
ACGCAAGCTGATTTCTTGTTTGCGTTATCGAAAATCAGCAAGTCCGTGGG
CTCAGGGGATTTGCAGCGGTACAACGACTGGATGCAGGAATTCGGCAGTG
TGTAGGCCTCCAGGGACGGGGAAGACCATGCTGGCCAAGGCTGTTGCCAC
GGAGTGTGCCACCACGTTCTTCAATGTCTCCGCGTCCACTCTCGGCTCTA
AGATGGCCGATGCTGCGAATAAATCAAGCCTTCCTGGCTCAAATACCCTT
CAATCAAGTACAAATACCGCTGAAAATGCTAGTGCAACAATTAAGGCGGC
AGCCACTCTGCCCTCGATTCCTTCGGCAGTGAAAAAACTTCCGCTGTTGC
TTCGCCAAGCCCGGGAACACGGCTTGCTTTCCCAGTACGAGGCGGCCATC
CAACTTCACCGAAAGGCGCAGCAAGTACTGCAGGAGTTTGCAAACGTAAC
CTTGAAATCGGATGATCAGGAGTGGCGTCGAAATAGATACCTCAAGCTGG
CCAAGGAGCTCAAGGCTGAGGAAGCTTTGGTAAATGAGCTGCAAAACACC
CTACGTTCCATTCCTCCCGTTCCGCCCAGTAATAAGCCCCGGCCTCCATC
TCCCCCTCCGCCGCTTTCGGCCGCTGCCGCAGCCAGCAAGAGGGAAGCAG
CGGCTCTCGCAGCATCACAGTTGCCTGATTCTGAAATTGCACGCGAACCC
GGAGTTTGGGAAGCACCAACGCCGCCGACCACATCCCGCCGCTCCAAAGC
CTCTGTGGGCGGGAGAGAGGGCGGTATGCGCACACACCGGCAATCTCTTG
GCGTTGGGGGAAAAGAAACCGCCGAAGGGAGGCGTGTCGCAGCTGCTTCG
ACCAGAAAATTAGGTTCAAACCGGCGGACGTCACAGGCAGGTGCCCGTCC
GGCCACTGTAACAAGCTCGTCGGCGGCGGCTGTGGCTGGGCGCGCCGAGG
GTACCCGGACACGCACCTCGGTCAAACCTCCGGTTCCCGTGACTGTGAAT
ACCGCTTCTTCTAGCTCCGGTGCGAGGCGTAACGCGGGGCGTGGCGTCAA
TGCTACTGCAGTGGACACTGCGGGCCCCTACGCCACCCTTCAGAAGCACA
ACTCGAGCAATTCTGCGAATAGCAGGGCAGAGGACACGCCCCCCCTGGCT
TTGAATGGAAAACCAAGATACAGCGATGTAGCCCGGGAGGCAGGATGGGC
AGACACGGAGCTTATTGAAAGCATCGAGCGGGAGATCGTGGAGCAGGGAG
TGAATGTCTCCTGGGACTCTATCGCTGATTTACAAGAGGCGAAACAGCTT
TTGCAAGAAGCAGTTGTATTGCCATTGTGGATGCCTGACTATTTCAAGGG
CATTCGGCGGCCATGGAAGGGGGTCTTGTTGTTCGGTACCGAGGTGACAG
CGAAAAAATGGTTCGAATCCTTTTTGAAATGGCGAGATACTACGCCCCAT
CCACGCTCTTCTTCGACGAGATCGATTCTATCGCCGGGTCGCGCGGGGGC
AGCGGCGAGCACGAGGCGAGTCGGCGCGTCAAGACAGAACTCATGGTTCA
GATGGATGGTGTAGCGGACGCCTCAGCCACGACCAGCGTAGATGATAACG
AGGAGGGAGCGGTGGACGAGGAGGAGAGGCCTGGAAGCAAAACAGTCATC
GTCCTGGCAGCCACCAACATGCCGTGGGATCTAGATGATGCTTTGCGACG
GCGAATGGAGAAGAGAATCTATATTTCGCTGCCTACCGAAGAAGGACGGA
AAGAATTATTCAGAATCAATATGAGGGATATTGAGGTGGGGGATGATTTG
GATTTGGATACCCTAGCTCAGCAAACGGAAGGATACTCTGGTGCAGACAT
TGCGAACGTGTGTCGAGACGCCTCGATGATGAGTGTGCGGCGGGTGATGG
AGGAAGCAAGGAAACAGGGACTACATGGCTTGGAGATTCAGAAGGCATTG
ATGGCAAACCGAGACAAACTCCAGGCGTCGATGGTCACGCAAGCTGATTT
CTTGTTTGCGTTATCGAAAATCAGCAAGTCCGTGGGCTCAGGGGATTTGC
AGCGGTACAACGACTGGATGCAGGAATTCGGCAGTGTGTAGGCCTCCAGG
GACGGGGAAGACCATGCTGGCCAAGGCTGTTGCCACGGAGTGTGCCACCA
CGTTCTTCAATGTCTCCGCGTCCACTCTCGGCTCTAAGATGGCCGATGCT
GCGAATAAATCAAGCCTTCCTGGCTCAAATACCCTTCAATCAAGTACAAA
TACCGCTGAAAATGCTAGTGCAACAATTAAGGCGGCAGCCACTCTGCCCT
CGATTCCTTCGGCAGTGAAAAAACTTCCGCTGTTGCTTCGCCAAGCCCGG
GAACACGGCTTGCTTTCCCAGTACGAGGCGGCCATCCAACTTCACCGAAA
GGCGCAGCAAGTACTGCAGGAGTTTGCAAACGTAACCTTGAAATCGGATG
ATCAGGAGTGGCGTCGAAATAGATACCTCAAGCTGGCCAAGGAGCTCAAG
GCTGAGGAAGCTTTGGTAAATGAGCTGCAAAACACCCTACGTTCCATTCC
TCCCGTTCCGCCCAGTAATAAGCCCCGGCCTCCATCTCCCCCTCCGCCGC
TTTCGGCCGCTGCCGCAGCCAGCAAGAGGGAAGCAGCGGCTCTCGCAGCA
TCACAGTTGCCTGATTCTGAAATTGCACGCGAACCCGGAGTTTGGGAAGC
ACCAACGCCGCCGACCACATCCCGCCGCTCCAAAGCCTCTGTGGGCGGGA
GAGAGGGCGGTATGCGCACACACCGGCAATCTCTTGGCGTTGGGGGAAAA
GAAACCGCCGAAGGGAGGCGTGTCGCAGCTGCTTCGACCAGAAAATTAGG
TTCAAACCGGCGGACGTCACAGGCAGGTGCCCGTCCGGCCACTGTAACAA
GCTCGTCGGCGGCGGCTGTGGCTGGGCGCGCCGAGGGTACCCGGACACGC
ACCTCGGTCAAACCTCCGGTTCCCGTGACTGTGAATACCGCTTCTTCTAG
CTCCGGTGCGAGGCGTAACGCGGGGCGTGGCGTCAATGCTACTGCAGTGG
ACACTGCGGGCCCCTACGCCACCCTTCAGAAGCACAACTCGAGCAATTCT
GCGAATAGCAGGGCAGAGGACACGCCCCCCCTGGCTTTGAATGGAAAACC
AAGATACAGCGATGTAGCCCGGGAGGCAGGATGGGCAGACACGGAGCTTA
TTGAAAGCATCGAGCGGGAGATCGTGGAGCAGGGAGTGAATGTCTCCTGG
GACTCTATCGCTGATTTACAAGAGGCGAAACAGCTTTTGCAAGAAGCAGT
TGTATTGCCATTGTGGATGCCTGACTATTTCAAGGGCATTCGGCGGCCAT
GGAAGGGGGTCTTGTTGTTCGGTACCGAGGTGACAGCGAAAAAATGGTTC
GAATCCTTTTTGAAATGGCGAGATACTACGCCCCATCCACGCTCTTCTTC
GACGAGATCGATTCTATCGCCGGGTCGCGCGGGGGCAGCGGCGAGCACGA
GGCGAGTCGGCGCGTCAAGACAGAACTCATGGTTCAGATGGATGGTGTAG
CGGACGCCTCAGCCACGACCAGCGTAGATGATAACGAGGAGGGAGCGGTG
GACGAGGAGGAGAGGCCTGGAAGCAAAACAGTCATCGTCCTGGCAGCCAC
CAACATGCCGTGGGATCTAGATGATGCTTTGCGACGGCGAATGGAGAAGA
GAATCTATATTTCGCTGCCTACCGAAGAAGGACGGAAAGAATTATTCAGA
ATCAATATGAGGGATATTGAGGTGGGGGATGATTTGGATTTGGATACCCT
AGCTCAGCAAACGGAAGGATACTCTGGTGCAGACATTGCGAACGTGTGTC
GAGACGCCTCGATGATGAGTGTGCGGCGGGTGATGGAGGAAGCAAGGAAA
CAGGGACTACATGGCTTGGAGATTCAGAAGGCATTGATGGCAAACCGAGA
CAAACTCCAGGCGTCGATGGTCACGCAAGCTGATTTCTTGTTTGCGTTAT
CGAAAATCAGCAAGTCCGTGGGCTCAGGGGATTTGCAGCGGTACAACGAC
TGGATGCAGGAATTCGGCAGTGTGTAGGCCTCCAGGGACGGGGAAGACCA
TGCTGGCCAAGGCTGTTGCCACGGAGTGTGCCACCACGTTCTTCAATGTC
TCCGCGTCCACTCTCGGCTCTAAGATGGCCGATGCTGCGAATAAATCAAG
CCTTCCTGGCTCAAATACCCTTCAATCAAGTACAAATACCGCTGAAAATG
CTAGTGCAACAATTAAGGCGGCAGCCACTCTGCCCTCGATTCCTTCGGCA
GTGAAAAAACTTCCGCTGTTGCTTCGCCAAGCCCGGGAACACGGCTTGCT
TTCCCAGTACGAGGCGGCCATCCAACTTCACCGAAAGGCGCAGCAAGTAC
TGCAGGAGTTTGCAAACGTAACCTTGAAATCGGATGATCAGGAGTGGCGT
CGAAATAGATACCTCAAGCTGGCCAAGGAGCTCAAGGCTGAGGAAGCTTT
GGTAAATGAGCTGCAAAACACCCTACGTTCCATTCCTCCCGTTCCGCCCA
GTAATAAGCCCCGGCCTCCATCTCCCCCTCCGCCGCTTTCGGCCGCTGCC
GCAGCCAGCAAGAGGGAAGCAGCGGCTCTCGCAGCATCACAGTTGCCTGA
TTCTGAAATTGCACGCGAACCCGGAGTTTGGGAAGCACCAACGCCGCCGA
CCACATCCCGCCGCTCCAAAGCCTCTGTGGGCGGGAGAGAGGGCGGTATG
CGCACACACCGGCAATCTCTTGGCGTTGGGGGAAAAGAAACCGCCGAAGG
GAGGCGTGTCGCAGCTGCTTCGACCAGAAAATTAGGTTCAAACCGGCGGA
CGTCACAGGCAGGTGCCCGTCCGGCCACTGTAACAAGCTCGTCGGCGGCG
GCTGTGGCTGGGCGCGCCGAGGGTACCCGGACACGCACCTCGGTCAAACC
TCCGGTTCCCGTGACTGTGAATACCGCTTCTTCTAGCTCCGGTGCGAGGC
GTAACGCGGGGCGTGGCGTCAATGCTACTGCAGTGGACACTGCGGGCCCC
TACGCCACCCTTCAGAAGCACAACTCGAGCAATTCTGCGAATAGCAGGGC
AGAGGACACGCCCCCCCTGGCTTTGAATGGAAAACCAAGATACAGCGATG
TAGCCCGGGAGGCAGGATGGGCAGACACGGAGCTTATTGAAAGCATCGAG
CGGGAGATCGTGGAGCAGGGAGTGAATGTCTCCTGGGACTCTATCGCTGA
TTTACAAGAGGCGAAACAGCTTTTGCAAGAAGCAGTTGTATTGCCATTGT
GGATGCCTGACTATTTCAAGGGCATTCGGCGGCCATGGAAGGGGGTCTTG
TTGTTCGG back to top
|