Naga_100004g87, gene2344 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g87
Unique Namegene2344
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:412614..416127 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g87
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:412614..416127 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003723RNA binding
GO:0005198structural molecule activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01630NO05G01630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2451rna2451-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2451rna2451Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2451

>rna2451-protein ID=rna2451-protein|Name=rna2451|organism=Nannochloropsis gaditana|type=polypeptide|length=916bp
MMAVGRARSSSSLVGIARYSTWLHHHQALQGQTWNMYTKSATRASRRTPQ
QRWLSSHPKAASLGYTLRVEGHFDEAKAQALRPKDVVTLFGAFEPYNIVM
RPPGAVGGGAKYQAKKGNSLPPPPLVLATFQVPSLKYAREIAHSFHHDES
WGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGG
SEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPV
GPKARGNTGEKRLGAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRG
EGDGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVL
PVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRA
WEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLEEGAAA
VIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEE
LREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPD
LKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPK
GEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAG
SLEEELARLPPSASSPLSTETGMGLDALFDRHWKEERGPGEEGGGEAGME
GGEAAASKPGGLGVAEPGAKGSGKDVQEEEEEKEEESYAGRDVNPFAIHP
EGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLE
EAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHK
EGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRK
RGRRLISVSKARYLGL
back to top
Synonyms
Publications