NO05G01630, NO05G01630 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G01630 vs. NCBI_GenBank
Match: EWM28236.1 (30s ribosomal protein s5 [Nannochloropsis gaditana]) HSP 1 Score: 1011.5 bits (2614), Expect = 1.700e-291 Identity = 556/890 (62.47%), Postives = 634/890 (71.24%), Query Frame = 0 Query: 73 AAGLGYTLRVEGRLAEAKARALGPKDVVALFGAFEPYNIVIHPXXXXXXXXXXXXXXXXXXXXXXXXLATFQVPSLKYAQEIAQSFQQDETWGERITVHQEKETFPVFISGLPEGVKGEELKEQIESAAACDPKQLKASGEPEPNGEFDPEVKAKSESLLARTAIDVYDSYAVFKCPDKFTSLGLLQGSFQLTPAGEGGNGLESKQQAASEEGEITAPAGEVLSPISAVGGEQQGGEGEEDDE------NDPSAVLSYAAWKTYPVRVNGLPADATVEEVMATFRKYMPYDVELLPVES---------GTRGAYLRFARRVQGTECVAEMKDVTVRGDKTLEVRRAWEKAFPILIEGGEEGRKTTVEELRQLVTTLRMNKDLHVLDAELVEGGAAAIVRFGSQPAAEEGMKLLSAGVGGRGKRVSLAWRDFRVDLNNLPLEVTEEELREMVHLTTPSKVRVSAPIGGKRRSGSVSFTTRPEAELAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPLDTTEEDVREILKGGYEPFQVDFPRSRKGNLKGEAVLRFAAYDQVVAAIGRLYGRDSPLDEAEHQARWTTAGEGISFDDPYGSLAEEVERMSTAEEGKEGMKKGGKEASNAQQELDAMVEKALEGEEGMEELVHRTAPFLKEGDDMSRHGEEGGTE---------------RGSXXXXXXXXXXXXXXXXXXXXXXXXXXXSVNPFGIYPEGKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKARYLGL 933 AA LGYTLRVEG EAKA+AL PKDVV LFGAFEPYNIV+ P LATFQVPSLKYA+EIA SF DE+WG+RITVHQE+ETFPVFISGLPEGV G ELK+QI+ A A DPKQ + G EP E K +S+SLL TAID YD+YAVF+CPDK++S+GLLQGSFQL P G G +++ + D VLSYAAWKTYPVRVNGLP DA EVMA F KYMPYDVE+LPVE+ GTRGAYLRFARR+QG EC +EM+DV+VR + L+VRRAWEK +P+LIE K T +EL Q++ L+ KD +LDAEL+E GAAA++RFGSQ AEEG+ +L AG G ++V AW+DFRVD+ NLPLEVT+EELREMVHLTTPSKV VS P+GG+ R+GS+SFTTR EA+LAFSQLSGTGLPDLKLRKAWAVYRLRVKGLP DT EED+RE+L+GGYEPFQVDFPRSRKGN KGEAVLRF YDQ+VAAIGRLYGRDSP+DE E+QARW +AGEG+SFDDP GSL EE+ R+ + + G LDA+ ++ + E G GEEGG E XXXXXXX XXXXXXXXX VNPF I+PEGKWVKMLVDTDTTQKIIKGGHILSYRALV+VGNL GCGG+GVGK ++EEAQIRAYRAAKKNLIH+DLYRNRC+TT LYGKHNNCRIYIQAG P RPHKEGRMIND+LR++GVECGEARS+GRRNPYSVVRA+FHAISKHEGVE LSRKRGRRLISVSKARYLGL Sbjct: 60 AASLGYTLRVEGHFDEAKAQALRPKDVVTLFGAFEPYNIVMRPPGAVGGGAKYQAKKGNSLPPPPLVLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPAS----ESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKRLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVR-NNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLEEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELARLPPSASSPLSTETG--------MGLDALFDRHWKEERG--------------------PGEEGGGEAXXXXXXXXXXXXXXXXXXXXXXXXSGKDVQXXXXXXXXXSYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKARYLGL 916
BLAST of NO05G01630 vs. NCBI_GenBank
Match: XP_005853580.1 (serine threonine protein, partial [Nannochloropsis gaditana CCMP526] >EKU22776.1 serine threonine protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 503.8 bits (1296), Expect = 1.100e-138 Identity = 250/357 (70.03%), Postives = 290/357 (81.23%), Query Frame = 0 Query: 314 DENDPSAVLSYAAWKTYPVRVNGLPADATVEEVMATFRKYMPYDVELLPVES---------GTRGAYLRFARRVQGTECVAEMKDVTVRGDKTLEVRRAWEKAFPILIEGGEEGRKTTVEELRQLVTTLRMNKDLHVLDAELVEGGAAAIVRFGSQPAAEEGMKLLSAGVGGRGKRVSLAWRDFRVDLNNLPLEVTEEELREMVHLTTPSKVRVSAPIGGKRRSGSVSFTTRPEAELAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPLDTTEEDVREILKGGYEPFQVDFPRSRKGNLKGEAVLRFAAYDQVVAAIGRLYGRDSPLDEAEHQARWTTAGEGISFDDPYGSLAEEVER 662 D D VLSYAAWKTYPVRVNGLP DA EVMA F KYMPYDVE+LPVE+ GTRGAYLRFARR+QG EC +EM+DV+VR + L+VRRAWEK +P+LIE K T +EL Q++ L+ KD +LDAEL++ GAAA++RFGSQ AEEG+ +L AG G ++V AW+DFRVD+ NLPLEVT+EELREMVHLTTPSKV VS P+GG+ R+GS+SFTTR EA+LAFSQLSGTGLPDLKLRKAWAVYRLRVKGLP DT EED+RE+L+GGYEPFQVDFPRSRKGN KGEAVLRF YDQ+VAAIGRLYGRDSP+DE E+QARW +AGEG+SFDDP GSL EE+ R Sbjct: 1 DGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVR-NNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLKEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELAR 356
BLAST of NO05G01630 vs. NCBI_GenBank
Match: GAX23188.1 (small subunit ribosomal protein S5 [Fistulifera solaris]) HSP 1 Score: 146.7 bits (369), Expect = 3.500e-31 Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 0 Query: 768 GKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKA 928 G+W +MLV D T K+ +GG + SYRALV+ GNLNGCGG+G+GK+ A A R K+N+ VD Y+ +T+ L GK N+C++Y+++ G + +I +IL+ G+ A+S G RNPY+V RA F A+ HE +E+++ KRG+RL+S+ +A Sbjct: 238 GEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCKRNIFFVDRYQGNGLTSDLAGKQNSCKVYLRSTDDGL--RGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDRA 395
BLAST of NO05G01630 vs. NCBI_GenBank
Match: GAX22149.1 (small subunit ribosomal protein S5 [Fistulifera solaris]) HSP 1 Score: 146.7 bits (369), Expect = 3.500e-31 Identity = 69/160 (43.12%), Postives = 105/160 (65.62%), Query Frame = 0 Query: 768 GKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKA 928 G+W +MLV D T K+ +GG + SYRALV+ GNLNGCGG+G+GK+ A A R K+N+ VD Y+ +T+ L GK N+C++Y+++ G + +I +IL+ G+ A+S G RNPY+V RA F A+ HE +E+++ KRG+RL+S+ +A Sbjct: 238 GEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCKRNIFFVDRYQGNGLTSDLAGKQNSCKVYLRSTDDGL--RGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDRA 395
BLAST of NO05G01630 vs. NCBI_GenBank
Match: CBJ31510.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.1 bits (362), Expect = 2.300e-30 Identity = 67/162 (41.36%), Postives = 105/162 (64.81%), Query Frame = 0 Query: 767 EGKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAK--KNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSK 927 +G+W ++LV TD K +KGG + YRALV VGNL+G GG+ +GKA + A A R AK NL++V+ Y+ + L GKHN ++YI + PG + G++ DIL +G+ G + +GRRN YS++ A+F A++KH G+E ++R RG+R++S+ + Sbjct: 202 QGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 363
BLAST of NO05G01630 vs. NCBI_GenBank
Match: EJK56771.1 (hypothetical protein THAOC_23280 [Thalassiosira oceanica]) HSP 1 Score: 138.7 bits (348), Expect = 9.500e-29 Identity = 70/165 (42.42%), Postives = 103/165 (62.42%), Query Frame = 0 Query: 768 GKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKARYLGL 933 G W + V D QK+ +GG + YRALV+ GN NG G+G+GKA S EA I+A + K+N+ +VD Y N VT L G+HN+C++ I+A P +I +IL+ G+ +S G RNPY+VV A F A+ E +EE++ KRG++LI++ +AR LG+ Sbjct: 353 GPWSECTVKVDRVQKVERGGTTVRYRALVIGGNGNGAAGFGIGKALSPNEAIIKAGKHCKRNVFYVDRYLNSGVTYDLAGRHNSCKVQIRAVTPDYGLHGHPLICEILKFSGISDASTKSHGNRNPYNVVYATFKALMTQESLEEVALKRGKKLINMQRARRLGI 517
BLAST of NO05G01630 vs. NCBI_GenBank
Match: XP_009034294.1 (hypothetical protein AURANDRAFT_22111 [Aureococcus anophagefferens] >EGB10703.1 hypothetical protein AURANDRAFT_22111 [Aureococcus anophagefferens]) HSP 1 Score: 138.3 bits (347), Expect = 1.200e-28 Identity = 69/162 (42.59%), Postives = 99/162 (61.11%), Query Frame = 0 Query: 766 PEGKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKA 928 PEG+W + +V D QK+++GG I+ YRALV VGNL G GG+ GK S ++A RA R AK +L VD +R+ + + GKHNNC + I A PG+ G + I+ LG ++ GRR+PYS V A F A++ VE+++RKRGRR++ + A Sbjct: 41 PEGRWAETIVKIDRVQKVVRGGTIMRYRALVAVGNLMGAGGFAFGKGHSPQDAVARASRRAKTDLRFVDRHRDVALAHDVRGKHNNCTVDIYAVPPGKGMVGGALGRAIMTQLGFSSFTIKARGRRSPYSYVAATFDALANLASVEDIARKRGRRILEIEHA 202
BLAST of NO05G01630 vs. NCBI_GenBank
Match: CBJ31507.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 135.6 bits (340), Expect = 8.000e-28 Identity = 65/162 (40.12%), Postives = 103/162 (63.58%), Query Frame = 0 Query: 767 EGKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAK--KNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSK 927 +G+W ++LV TD K +KGG + YRALV VGNL+G GG+ +GKA + A A R AK NL++V+ Y+ + L GKHN ++YI + + G++ DIL +G+ G + +GRRN YS++ A+F A++KH G+E ++R RG+R++S+ + Sbjct: 141 QGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWS-------RAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 295
BLAST of NO05G01630 vs. NCBI_GenBank
Match: OEU08388.1 (30S ribosomal protein S5 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 132.5 bits (332), Expect = 6.800e-27 Identity = 64/160 (40.00%), Postives = 105/160 (65.62%), Query Frame = 0 Query: 773 MLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQAGHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKARYLGL 933 ML+ TD K+ +GG ++S+RALV+ GN GCGG+G+GKA E+A A R AK+N+ VD +RN +T L G+ N+C++ ++ + G + + +IL++ G+ A++ G RN Y+VVRA F A+ HE +++++ KRG RL+++ KA+ LG+ Sbjct: 1 MLIRTDRVSKMWRGGRVVSFRALVIGGNTKGCGGFGLGKAFEPEDAVEIACRMAKRNIFFVDRFRNMTITRDLVGRQNSCKVQLRVTNNGL--RGNPLCCEILKLFGITNVVAKAHGSRNHYNVVRATFKALLTHESLDDIAMKRGIRLVNLEKAKRLGI 158
BLAST of NO05G01630 vs. NCBI_GenBank
Match: XP_002176761.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51224.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 128.6 bits (322), Expect = 9.800e-26 Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0 Query: 768 GKWVKMLVDTDTTQKIIKGGHILSYRALVVVGNLNGCGGYGVGKAPSMEEAQIRAYRAAKKNLIHVDLYRNRCVTTALYGKHNNCRIYIQA---GHPGRPHKEGRMINDILRVLGVECGEARSVGRRNPYSVVRAIFHAISKHEGVEELSRKRGRRLISVSKA 928 G+W +ML+ T K+ +GG + SYRALV+ GN NGCGG+G+GK+ A A R KKN+ VD Y+N +T L GK N+C + + G G P ++ +IL+ G+ ++ G RNP++VVRA F A+ HE +E+++ KRG+R++S+ +A Sbjct: 218 GEWSEMLITVGRTTKLWRGGRLESYRALVIGGNTNGCGGFGIGKSWDPVLAVDVAGRNCKKNIFFVDRYQNDGITRDLVGKQNSCIAKVMSRDNGLHGNP-----LMREILKRFGITNASCKAHGNRNPFNVVRATFKALMTHESLEDIALKRGKRILSLDRA 375 The following BLAST results are available for this feature:
BLAST of NO05G01630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G01630 ID=NO05G01630|Name=NO05G01630|organism=Nannochloropsis oceanica|type=gene|length=2799bpback to top protein sequence of NO05G01630.1 >NO05G01630.1-protein ID=NO05G01630.1-protein|Name=NO05G01630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=933bpback to top Synonyms
Publications
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