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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF4341 |
| Orig transcript id | gnl|cribi|Naga_100004g66.9096.mrna |
| Orig protein id | gnl|cribi|Naga_100004g66.9096 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:373701..375786 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2432 ID=rna2432|Name=rna2432|organism=Nannochloropsis gaditana|type=mRNA|length=2196bp
ATGTTTACATTTGGACACAGTGCCATGTACAGCGGTAGGGGCCGCTCTGG
CGGAGGCACTGTTTGCGGTGGTGAAGAAAGGGATCGAAAGGTGGCCTGCG
CTTCTTCTTTCAATTCGTTGCCGATAGCTACAGACCCGCTCCAACGCCAC
AAAGGCAAATCAAACGGGGCGAGCGGGTCATGCAGCATCCGCCTGCAGGC
CAAAGATTTTCTCGCAGAGTTAGAACGGAGCGCGGGGAAGACGACTCGCC
CTCGTAACCGCGAGACAGACATGCAGGCCCTCTCCGACTCTTCCTCTTCC
ACCAATCTCTTTCTGCAGCTCTCTTCCTCCTCATCCTCGAGCCTGGGAGG
GGAGGAGGGCGTCTCGCCGCTCCAGGAGCTCGAGGTGGAGGACCCGATGT
CCCCGCAGTCCGTCTTCCCCCGTGTCCGGCAGCGTCTGCGCGAGGAAGCC
GCCGACCAGTTCGGGGCCCCGTGCGGCAATCAGCATGGCATTACCGATCT
TTCAATCCCGAGCACCGGTGGGAAGAAGCGGTGGCAGTCGGGGAAGCATT
TGCCAGAGATTTCCGCCAGCGCCTCTGGCTCGGGGTCATCCGGCGCCATG
GGGCGTGCCCGGACTCCCCCCGTCCTTCCGTCGGACGCCGGTCAGCAGCG
TCACCCACCCCGGCAGAAGATTTCCGGTAGTCGAGGTTCATCGAGCGCGG
CGGAGGAAGCCGCGCAGTCCTCGCTGACAGCCGCGTGCGGGCAGCTGAAG
GACCTGTCCTTGCCCCCTCAGGACGACGCGGTCTCGGTCAGCTCCACCTC
CTCCTCCTCCTCCACAGGCACGCGCTGCAACTCGTGCCCCCCTCCGTCCC
TCCTGGCCTTCCACAAAACCGCACCCGCCTCTGTGGGGGGGAGCAACAGC
GGCAGTACCAGCAACTCCTACAGCAACCTTGTCATCAGTCCGCTCCCCCG
GGCGGCCCTACGGAAATCCAGCCTGTACGAGTTGCAAGCTGCCTTAGACG
AGTTGAGCAGAGCTCTGGCAGACATGGAGACGACTGCGAAGAAGCGTGCA
CGGGTGCGTAGTCAGGCATATTTAATCAAATTTGAGGCCGAATACGCGGA
TTTGGTGCGTGTGAAGGACCGCGCCATCAAGCGCCTCGACGCCTTGCTGC
GAAGGCGAACGGGGGGGCGGCAGAGTAAAGAGGAGGGCAACCACCAATAC
CCGTGGGAAAGCGAGGAAAAGGAGCAGCAGCGGCAGGTCCAGCCAGAGGG
GGCCTTCCCTGCGGACTCGAAACACGCCCAGCTACTGGCGCACGTGCTGA
TGGTAGTGATGGATTTGGACGACGAACTGTTGATGCTCATGGGGGAGGAG
CACGGAACCTGGGAGGAGCTAAAACGCCTCCGCGGTGACATTCGGTCGCA
CCTGAAGGAATTGGAGGCGGAGCTAGGGAGGGGGCCGGGCCCGGGCGAGG
GGAGTCCCAAGGTGGGGGAAAGAGATTTGCCTGCCACCGCCCCCATCTCT
CGATCCCTGTCATCGCACTCGGGGGGGAGGCCCAGTGGGGGAAAGAGAGA
CGCGCGCTCTCCCCTTGCCGTCTCCTTCTCGATGCCGACGTGCTTGGAGT
CTGGGTCGGGCGGGTTGGGACTGGCGCCGGGCTCGGGCGGGGGCGGTGTC
GCCTTCTCCCGAAAAGGGAAGGGGAGGGAGGCCGCCTGCCGTCTGCGGTC
CCTGGAAACCGATCCGGCCAAGACCAAGTCCGCGCCGAAGGGAGCCTTGC
ACGACCCAGACAGTCCCAGCGGCACCGTCACCACCTCGTCCTTGTCCTCC
TCTGCCTCGTCCGCCTTCTCCAACGTCAGTGACCAAGCGGTTGGACTTAC
CAGCGACGAGGAGAGGTCCCTTCGCGGGCCTGGAAAGTGCCCAAGCACGG
GTTGCGGCAAGAGCGTGGGAGAGTGGGAGCCGCGAACGTCCTGCCTTGCT
CCTCCTCCTGCGTCCATGTCTCGCGCAGTGTCCTCAGACGGACTTTCCCT
TCTCCTCCAGCGCCAGCACCAACCTCCCCTCTCGATCGCTCTCACGCAGA
ATGTCAAGGAGCGAGCGGCCTTCATCCACCACCGGGCTCTGGCCAGCACC
ACGTCGTCCTTGAGCCCCTCAGTCCCGCCGCCCGGCCTGCGGGCATCCTA
CCATCGCCGCGTCTGCCGTCCACAGGTAGAGAGCCTGGAGGGATAG back to topprotein sequence of rna2432 >rna2432-protein ID=rna2432-protein|Name=rna2432|organism=Nannochloropsis gaditana|type=polypeptide|length=362bp
MKMPDFSLTYPQFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGL
LSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGL
LVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHP
HPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLGQKTSFH
PCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGA
AVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVG
EAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERV
LTRRKEDAGKKE back to topmRNA from alignment at CM002459.1:373701..375786+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2432 ID=rna2432|Name=rna2432|organism=Nannochloropsis gaditana|type=mRNA|length=2086bp|location=Sequence derived from alignment at CM002459.1:373701..375786+ (Nannochloropsis gaditana)
TGCACAATTCGACGAAAACAAAAGAATACCAGATGGTTAGCACATAGGCG
TTCTGCCATCATGTGCCGACGAATTTACTGCCAAAAAGCCTGAGGAGGTA
TATGGGCATGTAATAAATTGGCCATAAACTTTCCAGGCCGGAGCCGTGAG
CCTCCTGACCATCCCACCAACATCCGTATCCACGACTGTCGATGTTCGTC
TTCCGAATCACTTGCTTGTTCGCTGAACTACTCATGTCGTGCActgctct
tcctcgctttGTTCTACTTCAACGATAGGAAAATGTCATATGCAAAATCG
TAGGAACGCATGTGGGACGCACTATGAACTTTCCACTCCTCTCTGCATTT
ATAGTAACATTTACTTACTCTATGCCTGGCTTCGCGCACTCGATTTTTTC
TAGCAACTGGGATTTTGCGTGGGGCATACATAGGAGTGTGAGGCAGTCAC
ACCCGTAACACGCACCCCGATCGCACCTGCTAGCACGTCTGGGAATGAAG
ATGCCTGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTCCGCGTT
TTGTGGCGGGAGCCTCATCGCCgcgtccgccctcctctttcttgtcgtTG
CCGGCAAGCGAGTTGGCATCTCAGGTAGGTTTGTAATTTTACCCGGCGTT
CTGATTCCTCGAGTGCGCTTGTGAAGCACTGTTGGACCCGTTCTCATTGT
CTCGGATCATATTTTTCACCATTTTCCAGGCCTTATCTCGGCGggccttc
tctcttctctccgcctccagccgctTGATCCATTGgctacctccttcctt
tcagcCTTTCTGGTTGCCGCACTTGCAGCCCCCTTGGTCTTtaatcctcc
ccctccccccctgctcctccctcccactgcctACGTCCTCAGTGGCCTCC
TCGTGGGGTTCGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGGT
GTCTGCGGGCTGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCAC
GTTCATGTCCGTAGGCGTCGCaatcgcctccttcctcggcgcccacccgc
accccttcttccgcgTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGCC
CTCGATCTTCCCatcccgcccgccttctgGACGCCAAGCGTCTTGCTCct
cgccgtcttcctcctcctccatcgcctcggtCAAAAAACCTCCTTTCATC
CCTGCTTGCACCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGGA
TTGGCTTTGAGCGGCATGTCGCAATCCCTCAAGGTCCTggacttcctctt
tctccgcttccccgGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCCG
CGGTGGGTCTCCTcacgcccttctccctctacATTCTCTCTCACCAAGCC
GTCGCCTACGGCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGCC
GCTAGCTACCAGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGCG
AGGCGATCTTTGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCCC
GCCCTAGTCCTGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCTG
GCCCATGTACGTGGGGGGCtacctgctggaggaggcgctggagagGGTGC
TGACACGCCGGAAAGAGGATGCTGGTAAAAAAGAatgagaaagagagaag
tAGGTAGCAAAAATAAAGtagggaaagggatggctTGAAATTTTTCTGCT
TAACGCAGGCTGAAAGACGTGTAAGTGTATGACCTCACGGGAATCGGCGC
GATGTCGATGCGTTGGTTAGATTTGTCTAGAAATGTATCAAGGACCACAC
ATTTTATCTGGAAAGGAATAGGGGACATCAGAAAATGACTCAAGGTcaca
aagggaagaaagaaatttCCAATTTGGAGAAATCGGCGCTGCTGCGCTCA
TAGAATCAGACCATCATAATTTCCATGCAATCGTCACCTTTAATCTGCTT
TTCAGTAAAGATACATATAATGATCCGTACCTTGCGTGTCTTATCTTGAG
ATATAAGGGACCGGAGATTAATTAAAAATGCAAACC back to topCoding sequence (CDS) from alignment at CM002459.1:373701..375786+ >rna2432 ID=rna2432|Name=rna2432|organism=Nannochloropsis gaditana|type=CDS|length=2178bp|location=Sequence derived from alignment at CM002459.1:373701..375786+ (Nannochloropsis gaditana)
ATGAAGATGCCTGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTC
CGCGTTTTGTGGCGGGAGCCTCATCGCCgcgtccgccctcctctttcttg
tcgtTGCCGGCAAGCGAGTTGGCATCTCAGGCCTTATCTCGGCGggcctt
ctctcttctctccgcctccagccgctTGATCCATTGgctacctccttcct
ttcagcCTTTCTGGTTGCCGCACTTGCAGCCCCCTTGGTCTTtaatcctc
cccctccccccctgctcctccctcccactgcctACGTCCTCAGTGGCCTC
CTCGTGGGGTTCGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGG
TGTCTGCGGGCTGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCA
CGTTCATGTCCGTAGGCGTCGCaatcgcctccttcctcggcgcccacccg
caccccttcttccgcgTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGC
CCTCGATCTTCCCatcccgcccgccttctgGACGCCAAGCGTCTTGCTCc
tcgccgtcttcctcctcctccatcgcctcggtCAAAAAACCTCCTTTCAT
CCCTGCTTGCACCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGG
ATTGGCTTTGAGCGGCATGTCGCAATCCCTCAAGGTCCTggacttcctct
ttctccgcttccccgGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCC
GCGGTGGGTCTCCTcacgcccttctccctctacATTCTCTCTCACCAAGC
CGTCGCCTACGGCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGC
CGCTAGCTACCAGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGC
GAGGCGATCTTTGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCC
CGCCCTAGTCCTGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCT
GGCCCATGTACGTGGGGGGCtacctgctggaggaggcgctggagagGGTG
CTGACACGCCGGAAAGAGGATGCTGGTAAAAAAGAatgaATGAAGATGCC
TGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTCCGCGTTTTGTG
GCGGGAGCCTCATCGCCgcgtccgccctcctctttcttgtcgtTGCCGGC
AAGCGAGTTGGCATCTCAGGCCTTATCTCGGCGggccttctctcttctct
ccgcctccagccgctTGATCCATTGgctacctccttcctttcagcCTTTC
TGGTTGCCGCACTTGCAGCCCCCTTGGTCTTtaatcctccccctcccccc
ctgctcctccctcccactgcctACGTCCTCAGTGGCCTCCTCGTGGGGTT
CGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGGTGTCTGCGGGC
TGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCACGTTCATGTCC
GTAGGCGTCGCaatcgcctccttcctcggcgcccacccgcaccccttctt
ccgcgTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGCCCTCGATCTTC
CCatcccgcccgccttctgGACGCCAAGCGTCTTGCTCctcgccgtcttc
ctcctcctccatcgcctcggtCAAAAAACCTCCTTTCATCCCTGCTTGCA
CCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGGATTGGCTTTGA
GCGGCATGTCGCAATCCCTCAAGGTCCTggacttcctctttctccgcttc
cccgGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCCGCGGTGGGTCT
CCTcacgcccttctccctctacATTCTCTCTCACCAAGCCGTCGCCTACG
GCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGCCGCTAGCTACC
AGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGCGAGGCGATCTT
TGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCCCGCCCTAGTCC
TGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCTGGCCCATGTAC
GTGGGGGGCtacctgctggaggaggcgctggagagGGTGCTGACACGCCG
GAAAGAGGATGCTGGTAAAAAAGAatga back to top
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