EWM28165.1, cds2424 (CDS) Nannochloropsis gaditana

Overview
NameEWM28165.1
Unique Namecds2424
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:374195..374324 +
Alignment locationCM002459.1:374430..375388 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28165.1
Productprotein of unknown function DUF4341
Orig transcript idgnl|cribi|Naga_100004g66.9096.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:374195..374324 +
CM002459.1supercontigCM002459.1:374430..375388 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007272Sulf_transp
IPR025598DUF4341
Homology
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|585110510|gb|EWM28165.1| (protein of unknown function DUF4341 [Nannochloropsis gaditana])

HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0
Query:    1 MKMPDFSLTYPQFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLGQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERVLTRRKEDAGKKE 362
            MKMPDFSLTYPQFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLGQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERVLTRRKEDAGKKE
Sbjct:    1 MKMPDFSLTYPQFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLGQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERVLTRRKEDAGKKE 362          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|1183361200|gb|ORX88499.1| (DUF395-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 160.999 bits (406), Expect = 6.509e-43
Identity = 119/320 (37.19%), Postives = 169/320 (52.81%), Query Frame = 0
Query:   13 FTPWSAFCGGSLIAASALLFLVVAGKRVGISGL----ISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAY-VLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPA----FWTPSVLLLAVFLLLHRLGQKTSFHP--CLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGP-LATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALV 320
            FTP  +  GG L++ +A   L   G+ +G SG+    +  G     R+  L  +A+S   A LV       +F P PP  + P     ++ GLLVGFG+RLG+GCTSGH +CG+SRLS R  VA  TF S G+  A+ +        ++ P T    S AL LP  PA       P + +LA + ++ +L  + +       H+ A LSG  F+LGL++SGMS   KVL+FL +  P WDPSL  V   A+G L P+   IL  ++V       +   P   P      S  +D +L+ G +IFG GWG+ G+CPGPA+V
Sbjct:    2 FTPVESLAGGLLLSTAAYQLLTCNGRIMGASGIFAGSVKGGEEGVWRIYFLSGMASS---AILVR------LFGPAPPAFVQPSEVIPIIGGLLVGFGSRLGSGCTSGHMICGVSRLSPRSIVATATFFSTGLITANLMN-------KLYPDTLAEGSTALQLPSIPAAVGLLGLPYLAILA-YRMVRKLADQNAIESVNARHITALLSGFFFSLGLSISGMSDPAKVLNFLRILSPSWDPSLAFV---ALGGLIPYG--ILYQKSVK------QAAKPALAPQFEIPTSTVIDQKLITGASIFGVGWGLAGVCPGPAIV 293          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|219112263|ref|XP_002177883.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410768|gb|EEC50697.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 147.132 bits (370), Expect = 2.024e-37
Identity = 123/354 (34.75%), Postives = 172/354 (48.59%), Query Frame = 0
Query:   18 AFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRL--QPLDPLATSFLSAFLVAALAAPLVFNPP-----PPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHP--HPFFRVAPPTPPASSDALDL-PIPPAFWTPSVLLLAVFLLLHRLGQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFL---RFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATS--------QSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMY-VGGYLLEEALER 349
            A  GG++I +++ + L++ G  +G SG+ S+ LL   +L           FL++FL   L   + F+ P     P    L P  Y L+GL VGFGT+L NGCTSGHG+CGL+RLSKR   AV TFM+  VA        P    F  V        + +  L  +  A    SV+  AV     +  +K        L A  SG++FA GL +  M    +VL FL L       WDP+LV V+G  V       + +LS+Q +  G    +  TP K PLA           +  +D +L++G   FG GWG+ GICPGP + L   G + V L +WP Y VG Y+  E   +
Sbjct:    5 ALLGGAMIGSASGVLLLLTGNIMGASGIASSALLKPTQLLTDQSQHWKLVFLASFL---LTTNVFFSVPFDRSDPAAATLSPLGYGLAGLFVGFGTKLSNGCTSGHGICGLARLSKRSMAAVATFMASAVATTYLTQVSPLLTKFTSVLQVEAAQQTHSQPLLGVASALTLLSVVASAVAPWFRQ--KKDENGQARILPAIASGSMFASGLYIGQMVYQSRVLGFLNLAGMTDGSWDPTLVFVMGGGV------MVSLLSYQFLE-GYRITRSTTPVKHPLALKPDAPFCIPTNTHIDAQLILGSVAFGIGWGLGGICPGPGIFLAGAGVQNVILHWWPSYFVGTYIANEIQNQ 346          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|224006255|ref|XP_002292088.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972607|gb|EED90939.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 144.821 bits (364), Expect = 2.399e-36
Identity = 135/385 (35.06%), Postives = 193/385 (50.13%), Query Frame = 0
Query:   13 FTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLAT---SFLSAFLVA-----------ALAAPLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPH-PFFRVAPPTPPASSDALDLPIPPAFWT--PSVLLLAVFL-LLHRLGQKTSFHPCLHLA--------AFLSGALFALGLALSGMSQSLKVLDFLFL---RFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGD---PSVKIYTP-GK----GPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEE---ALERVLTRRKED 357
            FTP +   GGSLI  SA   L+  G  +G SGL S+ L+ S R    DP  T   SF++AF +            AL  P + +    P++     ++  G LVGFGTRLGNGCT+GHG+CG++RLS R   AV  FM+ G+ +AS  G  P  PF+     T  + ++ L      A  T   SV++ A    LL +     S      L         + +S A F+LGL +S M+ S K+  FL +   +   WDP+LV V+G   G L  F    +S+Q VA  +    S  I  P G+    G      ++ +D  L++GEA+FG GWG  G+CPGPA+ L   G+  V + +WP +  G LL E   A++   T +K +
Sbjct:    4 FTPTTGLLGGSLIGLSAATLLLFNGDILGASGLASS-LVVSPRKTFTDPSQTWKLSFMAAFWLTSRLYIAYVDKDALKDPSMNSNSEIPIV-SSLGFIAGGFLVGFGTRLGNGCTTGHGICGMARLSIRSFAAVGAFMATGIFMAS--GCSPTCPFYPYLRTTYDSVTERLPTESTLAVGTALASVMVGAALKGLLRKAPDDASAEEKEELENDKRKIIPSIVSAAFFSLGLVISNMTISSKIYGFLNMKGIKEGTWDPTLVCVMGG--GFLVSF----ISYQWVAGFNLFKNSKAIECPLGQEKECGKFNVMTNKTIDNNLVIGEALFGLGWGAAGLCPGPAMFLACAGYPSVLMKWWPSFFVGALLAEKVKAIQNKATNKKNN 378          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|551661648|ref|XP_005833590.1| (hypothetical protein GUITHDRAFT_107393 [Guillardia theta CCMP2712] >gi|428177732|gb|EKX46610.1| hypothetical protein GUITHDRAFT_107393 [Guillardia theta CCMP2712])

HSP 1 Score: 140.969 bits (354), Expect = 7.962e-35
Identity = 108/346 (31.21%), Postives = 171/346 (49.42%), Query Frame = 0
Query:   12 QFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLL----AVFLLLHRLGQKTSFHPCL--HLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERVL 351
             F P  A  GG L+  +A + + + G  +G+SG++  G +   +   L   A  FL   LV  +    V+      + +     +++GL VG G+ +GNGCTSGHG+CG SRLS R     +TFM+ G A AS    H     +   P P      +DL   P+ W  + ++L    +++ ++  LGQ       L     +F+ G+LFA GL +SGM+    V+ FL +    W+P+L+ V+G A+ +  PF L  + +  +     S+K   P +          +D RL++G  IFG GWG  G+CPGPALV ++       +    M+V G+ L E + + L
Sbjct:   62 NFQPAYALTGGLLLGIAAAVRMYLRGDVLGVSGIV--GGIVKGKSSELSRWA--FLLGLLVGGVILKSVYPSALGSMQVSELRLIIAGLAVGIGSTMGNGCTSGHGICGNSRLSPRSLAYTLTFMAAGFATASIF--HSTAAVKAHFPAP------VDL---PSTWQLAFIVLILHGSLYAMVVSLGQAMGIEKELLREFVSFVDGSLFAFGLGISGMTNPANVVSFLDVSQGTWNPTLMFVMGGAILVTAPFMLGFIKNGTLKKPVLSLKFELPTR--------VNLDTRLILGGVIFGFGWGYAGMCPGPALVNVSNPQAASIIFNAAMFV-GFSLGEPIAKTL 383          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|303276014|ref|XP_003057301.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226461653|gb|EEH58946.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 139.043 bits (349), Expect = 1.442e-34
Identity = 115/330 (34.85%), Postives = 164/330 (49.70%), Query Frame = 0
Query:   12 QFTPWSAFCGGSLIAASALLFLVVAGKRVGISG----LISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASS-DALDLPIPPAFWTPSVLLLAV---FLLLHRL---------GQKTSFHPCLHL-AAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLA 323
             F P  A  GG+++  + +  L++ G+ +GISG    L++ G  S  R   L  L  S L+     A   P     P   L    T  V++GLLVG G+ LGNGCTSGHG+CG SR + R     + FM+ G A A+    +       A    PAS+ D + LP          ++ A    FL L +L         G+ T FH  L L A  +SG +F LGL++SGM ++ KV  FL      WDPSL++V+G A+GL  P         A A  +   K +   +  +   ++  +D  LL+G  +FGAGWG+ G+CPGPA+V  A
Sbjct:    6 HFEPAHALIGGAILGVATVGKLLLTGRVLGISGSFKGLVTIGDTSRWRFAFLAGLVGSGLAD----AYMNPDQVAEPSAGL----TRTVVAGLLVGAGSGLGNGCTSGHGICGNSRFAPRSMAYTVLFMATGFAAATLFDTN------AALGVNPASALDRMKLPSAEEMIGYGNIIAAAAASFLGLGQLARAHAKKNDGEHTDFHDTLGLVAEVISGFVFGLGLSISGMRRAAKVSGFLSATASSWDPSLMLVMGGAMGLAIP---------AFARSESETKPHCAREFSV-PPKNRGIDKNLLLGGVMFGAGWGLAGMCPGPAIVSFA 311          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|678334962|emb|CDW76784.1| (UNKNOWN [Stylonychia lemnae])

HSP 1 Score: 138.658 bits (348), Expect = 3.456e-34
Identity = 119/360 (33.06%), Postives = 167/360 (46.39%), Query Frame = 0
Query:   16 WSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLL--SSLRLQP---------LDPLATSFLSAFLV--AALAAPLVFNPPPPPL-LLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLG-QKTSFHPCLH--LAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALV-LLAQGHRKVALLFWPMYVGGYLLEEALERVLTRRKED 357
            W+ F GG LI+ S  L L   GK  G+SG  +  +   +S   Q            P+   F+  + +  +      +F+P    + L+    + + G LVGFGT++ NGCTSGHGVCGL RLS R   A + F+   V IA+F     +PFF           +AL       +W   VL +   L +  L   K +F   L     ++  G LF LGL LSGM +  KV+ FL  R   WDP+L+ VL +AV L       ++  +     + +  +      P AT+     DWRL+ G  IFG GWGITG+CPGPAL+ L A  H     +F  M   G +  E   +    RK  
Sbjct:   11 WAVF-GGFLISLSTTLNLRYYGKVTGLSGYFNTVVKGDTSQEFQRKFSFLAGLIFLPVLMRFIFGYYIIYSNNYVQYLFDPEVLSVALVDNWGFTIGGFLVGFGTKMANGCTSGHGVCGLPRLSFRSITATVVFLLTAVIIATF--RSYNPFFYNGAAWSQGFLNAL-------YWVGLVLFIIDQLAVVALAVTKPNFRTALTEVFQSYFFGNLFGLGLVLSGMCRQSKVIGFLIWR-STWDPTLLFVLLSAV-LFNAIGFRLVLSRGAPVNNDNFDL------PDATANP---DWRLVGGAVIFGLGWGITGLCPGPALISLFALSH---VFMFLIMVAFGQVFFEQTHKFYVSRKNQ 346          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|403339554|gb|EJY69039.1| (YeeE/YedE family protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 137.117 bits (344), Expect = 1.213e-33
Identity = 116/362 (32.04%), Postives = 174/362 (48.07%), Query Frame = 0
Query:   17 SAFCGGSLIAASALLFLVVAGKRVGISG----LISAGLLSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTA----------YVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLGQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFW--PMYVGGYLLEEALERVLTRRKEDAGKKE 362
             A  GGSLIA S  L L   G+  GISG    +I   L+S    +         +   L   L   + F+      +    A          ++L G LVGFGT++GNGCTSGHGVCG+ RLS R  +A +TFM+ G+ +A+    + +PFF         SSD  D       W    LL+A+ +L      K +        +FL G +F LGL +SGM +  K+  FL +    WDP+L+ V+ +AV      ++ + + Q++   D   K  T  + P   S S K D +++ G +IFG GWG++ +CPGP LV+L         +FW   + +G +  E+ +   + +RK D    E
Sbjct:   11 QAVIGGSLIALSTTLNLYNYGRITGISGAFNSVIKKDLISGFYWKYSFLYGLLLVPVLLYLCLGTQIKFSDSFVLQMFDTEAAMAYNLNLYGWLLGGFLVGFGTKMGNGCTSGHGVCGIPRLSIRSILATLTFMAFGILMATL--RYNYPFF----TQGSQSSD--DFKTFHN-WAGIALLIAIHILYMLFLNKNNHIRSELSYSFLYGIIFGLGLLISGMLRVSKIQGFLTMS-EFWDPTLMFVMASAV------AINLFTFQSILKRDAPAKAETF-QVP---SSSAKPDLQVIGGASIFGLGWGLSSLCPGPGLVILFTSTNG---MFWVITLVLGQFAFEKLVS--IIKRKSDQSATE 347          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|929763837|ref|XP_014156899.1| (hypothetical protein SARC_04720 [Sphaeroforma arctica JP610] >gi|906953853|gb|KNC82997.1| hypothetical protein SARC_04720 [Sphaeroforma arctica JP610])

HSP 1 Score: 136.732 bits (343), Expect = 1.465e-33
Identity = 132/352 (37.50%), Postives = 174/352 (49.43%), Query Frame = 0
Query:    8 LTYPQFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLATSFLSAFLVAALA----APLVFNPPPPPLLLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHPFFRVAPPTPPASSDALD----LPIPPAFWTPSVLL--LAVFLLLHRLGQKTSFHPCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALER 349
            L  P FTP +A  GG++I  ++ L L + G+  GISG  + G+L   R + +D   T FLS    A LA    +P VF    P   +   + V +G LVGFGT +G+GCTSGHGVCGL R S R  VAV TFMS  +   S +    +     A  T P  S+ +     L + P  +  S+L   LA  L   RLG+    +  L  A++ SG LF LGL +SGMS   KVL FL L    WDPSL  V+G AV    P   Y L  +   Y   S  + T             +  RL++G ++FG GWG+ G+CPGPAL+  A G          M VG  L     +R
Sbjct:    4 LISPLFTPLAASVGGTMIGMASSLHLAMNGRVTGISGTYN-GILK--RQKDIDWRMT-FLSGVGSAGLALHLYSPEVFGNAVP---VNAASTVAAGALVGFGTVMGSGCTSGHGVCGLPRASPRSIVAVATFMSTAIITRSSI--VSNDVLCKAVQTGPQMSEVMSSLEFLSVSPGMFYGSLLASSLAYSLNNVRLGRSVDTYKSLA-ASYASGGLFGLGLGVSGMSDPSKVLGFLDL-INVWDPSLAFVMGGAVAFNVPV-WYALLKKDKPYLLDSFSVPT----------RRDITGRLVMGSSLFGVGWGLAGLCPGPALLGFATGDVGFTGYVLSMTVGMALFNALSKR 333          
BLAST of EWM28165.1 vs. NCBI_GenBank
Match: gi|224005795|ref|XP_002291858.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972377|gb|EED90709.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 137.502 bits (345), Expect = 3.023e-33
Identity = 130/394 (32.99%), Postives = 189/394 (47.97%), Query Frame = 0
Query:   13 FTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGLLSSLRLQPLDPLATSFLSAFLVAA--LAAPLVFNPPPPPL------------LLPPTAYVLSGLLVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHPHP---FFRVAPPTPPASSD-ALDLPIPPAFWTPSVL----LLAVFLLLHRL-------GQKTSFHPCLH--LAAFLSGALFALGLALSGMSQSLKV---LDFLFLRFPGWDPSLVVVLGAAVGLLTPFSLYILSHQAV-AYG--DPSVKIYTP-GK----GPLATSQSEKVDWRLLVGEAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERVLT--RRKEDAGKKE 362
            FTP +   GG +I  SA + L+  G  +G SGL S+ +++  R   LD  A S    F VAA  L A +     P  L             +    Y+L G  VGFGTRLGNGCT+GHG+CG++R S R    V +FM+ G+  AS +     P   +FR       +S D A  LP   A    SVL    ++A F  L R         +K  F       + A  S  LF++GL +S M++  K+   LD   ++   WDP+L++V+G        F +  LS+Q V  +G  + S  +  P G+    G  +   ++ +D  L+VGE IFG GWG  G CPGPA+ L   G+  +   +WP +  G LL E  + + T  R + +   +E
Sbjct:    7 FTPAAGLVGGLIIGLSAAVLLLSNGDILGASGLASSFVITP-RKTFLD--AASHWKLFFVAAFFLTARIYVTIFPSALDDARLESGDGIPRVSSLGYILGGFFVGFGTRLGNGCTTGHGICGMARFSLRSFAGVASFMATGILSAS-VSTDSGPISQYFR------DSSMDVASYLPTQTANIIASVLGGLGVVAAFAGLFRKAPEDATDAEKEEFKNNRRKIIPAIFSAILFSVGLVVSQMTKFSKIYGFLDMKLIKAGTWDPTLILVMGGG------FIVSFLSYQWVKGHGIINQSRALDCPLGQKGECGQFSVPTNKTIDANLIVGELIFGLGWGTAGWCPGPAMFLAFAGYPYLLYRWWPAFFVGSLLGEQAKSIKTYVRDRRNIVDRE 384          
The following BLAST results are available for this feature:
BLAST of EWM28165.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110510|gb|EWM28165.1|0.000e+0100.00protein of unknown function DUF4341 [Nannochlorops... [more]
gi|1183361200|gb|ORX88499.1|6.509e-4337.19DUF395-domain-containing protein [Basidiobolus mer... [more]
gi|219112263|ref|XP_002177883.1|2.024e-3734.75predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|224006255|ref|XP_002292088.1|2.399e-3635.06predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|551661648|ref|XP_005833590.1|7.962e-3531.21hypothetical protein GUITHDRAFT_107393 [Guillardia... [more]
gi|303276014|ref|XP_003057301.1|1.442e-3434.85predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|678334962|emb|CDW76784.1|3.456e-3433.06UNKNOWN [Stylonychia lemnae][more]
gi|403339554|gb|EJY69039.1|1.213e-3332.04YeeE/YedE family protein (macronuclear) [Oxytricha... [more]
gi|929763837|ref|XP_014156899.1|1.465e-3337.50hypothetical protein SARC_04720 [Sphaeroforma arct... [more]
gi|224005795|ref|XP_002291858.1|3.023e-3332.99predicted protein [Thalassiosira pseudonana CCMP13... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2432rna2432Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications