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Properties
Property Name | Value |
Product | protein of unknown function DUF4341 |
Orig transcript id | gnl|cribi|Naga_100004g66.9096.mrna |
Orig protein id | gnl|cribi|Naga_100004g66.9096 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002459.1 | supercontig | CM002459.1:373701..375786 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2432 ID=rna2432|Name=rna2432|organism=Nannochloropsis gaditana|type=mRNA|length=2196bp ATGTTTACATTTGGACACAGTGCCATGTACAGCGGTAGGGGCCGCTCTGG CGGAGGCACTGTTTGCGGTGGTGAAGAAAGGGATCGAAAGGTGGCCTGCG CTTCTTCTTTCAATTCGTTGCCGATAGCTACAGACCCGCTCCAACGCCAC AAAGGCAAATCAAACGGGGCGAGCGGGTCATGCAGCATCCGCCTGCAGGC CAAAGATTTTCTCGCAGAGTTAGAACGGAGCGCGGGGAAGACGACTCGCC CTCGTAACCGCGAGACAGACATGCAGGCCCTCTCCGACTCTTCCTCTTCC ACCAATCTCTTTCTGCAGCTCTCTTCCTCCTCATCCTCGAGCCTGGGAGG GGAGGAGGGCGTCTCGCCGCTCCAGGAGCTCGAGGTGGAGGACCCGATGT CCCCGCAGTCCGTCTTCCCCCGTGTCCGGCAGCGTCTGCGCGAGGAAGCC GCCGACCAGTTCGGGGCCCCGTGCGGCAATCAGCATGGCATTACCGATCT TTCAATCCCGAGCACCGGTGGGAAGAAGCGGTGGCAGTCGGGGAAGCATT TGCCAGAGATTTCCGCCAGCGCCTCTGGCTCGGGGTCATCCGGCGCCATG GGGCGTGCCCGGACTCCCCCCGTCCTTCCGTCGGACGCCGGTCAGCAGCG TCACCCACCCCGGCAGAAGATTTCCGGTAGTCGAGGTTCATCGAGCGCGG CGGAGGAAGCCGCGCAGTCCTCGCTGACAGCCGCGTGCGGGCAGCTGAAG GACCTGTCCTTGCCCCCTCAGGACGACGCGGTCTCGGTCAGCTCCACCTC CTCCTCCTCCTCCACAGGCACGCGCTGCAACTCGTGCCCCCCTCCGTCCC TCCTGGCCTTCCACAAAACCGCACCCGCCTCTGTGGGGGGGAGCAACAGC GGCAGTACCAGCAACTCCTACAGCAACCTTGTCATCAGTCCGCTCCCCCG GGCGGCCCTACGGAAATCCAGCCTGTACGAGTTGCAAGCTGCCTTAGACG AGTTGAGCAGAGCTCTGGCAGACATGGAGACGACTGCGAAGAAGCGTGCA CGGGTGCGTAGTCAGGCATATTTAATCAAATTTGAGGCCGAATACGCGGA TTTGGTGCGTGTGAAGGACCGCGCCATCAAGCGCCTCGACGCCTTGCTGC GAAGGCGAACGGGGGGGCGGCAGAGTAAAGAGGAGGGCAACCACCAATAC CCGTGGGAAAGCGAGGAAAAGGAGCAGCAGCGGCAGGTCCAGCCAGAGGG GGCCTTCCCTGCGGACTCGAAACACGCCCAGCTACTGGCGCACGTGCTGA TGGTAGTGATGGATTTGGACGACGAACTGTTGATGCTCATGGGGGAGGAG CACGGAACCTGGGAGGAGCTAAAACGCCTCCGCGGTGACATTCGGTCGCA CCTGAAGGAATTGGAGGCGGAGCTAGGGAGGGGGCCGGGCCCGGGCGAGG GGAGTCCCAAGGTGGGGGAAAGAGATTTGCCTGCCACCGCCCCCATCTCT CGATCCCTGTCATCGCACTCGGGGGGGAGGCCCAGTGGGGGAAAGAGAGA CGCGCGCTCTCCCCTTGCCGTCTCCTTCTCGATGCCGACGTGCTTGGAGT CTGGGTCGGGCGGGTTGGGACTGGCGCCGGGCTCGGGCGGGGGCGGTGTC GCCTTCTCCCGAAAAGGGAAGGGGAGGGAGGCCGCCTGCCGTCTGCGGTC CCTGGAAACCGATCCGGCCAAGACCAAGTCCGCGCCGAAGGGAGCCTTGC ACGACCCAGACAGTCCCAGCGGCACCGTCACCACCTCGTCCTTGTCCTCC TCTGCCTCGTCCGCCTTCTCCAACGTCAGTGACCAAGCGGTTGGACTTAC CAGCGACGAGGAGAGGTCCCTTCGCGGGCCTGGAAAGTGCCCAAGCACGG GTTGCGGCAAGAGCGTGGGAGAGTGGGAGCCGCGAACGTCCTGCCTTGCT CCTCCTCCTGCGTCCATGTCTCGCGCAGTGTCCTCAGACGGACTTTCCCT TCTCCTCCAGCGCCAGCACCAACCTCCCCTCTCGATCGCTCTCACGCAGA ATGTCAAGGAGCGAGCGGCCTTCATCCACCACCGGGCTCTGGCCAGCACC ACGTCGTCCTTGAGCCCCTCAGTCCCGCCGCCCGGCCTGCGGGCATCCTA CCATCGCCGCGTCTGCCGTCCACAGGTAGAGAGCCTGGAGGGATAG back to topprotein sequence of rna2432 >rna2432-protein ID=rna2432-protein|Name=rna2432|organism=Nannochloropsis gaditana|type=polypeptide|length=362bp MKMPDFSLTYPQFTPWSAFCGGSLIAASALLFLVVAGKRVGISGLISAGL LSSLRLQPLDPLATSFLSAFLVAALAAPLVFNPPPPPLLLPPTAYVLSGL LVGFGTRLGNGCTSGHGVCGLSRLSKRGAVAVITFMSVGVAIASFLGAHP HPFFRVAPPTPPASSDALDLPIPPAFWTPSVLLLAVFLLLHRLGQKTSFH PCLHLAAFLSGALFALGLALSGMSQSLKVLDFLFLRFPGWDPSLVVVLGA AVGLLTPFSLYILSHQAVAYGDPSVKIYTPGKGPLATSQSEKVDWRLLVG EAIFGAGWGITGICPGPALVLLAQGHRKVALLFWPMYVGGYLLEEALERV LTRRKEDAGKKE back to topmRNA from alignment at CM002459.1:373701..375786+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2432 ID=rna2432|Name=rna2432|organism=Nannochloropsis gaditana|type=mRNA|length=2086bp|location=Sequence derived from alignment at CM002459.1:373701..375786+ (Nannochloropsis gaditana) TGCACAATTCGACGAAAACAAAAGAATACCAGATGGTTAGCACATAGGCG
TTCTGCCATCATGTGCCGACGAATTTACTGCCAAAAAGCCTGAGGAGGTA
TATGGGCATGTAATAAATTGGCCATAAACTTTCCAGGCCGGAGCCGTGAG
CCTCCTGACCATCCCACCAACATCCGTATCCACGACTGTCGATGTTCGTC
TTCCGAATCACTTGCTTGTTCGCTGAACTACTCATGTCGTGCActgctct
tcctcgctttGTTCTACTTCAACGATAGGAAAATGTCATATGCAAAATCG
TAGGAACGCATGTGGGACGCACTATGAACTTTCCACTCCTCTCTGCATTT
ATAGTAACATTTACTTACTCTATGCCTGGCTTCGCGCACTCGATTTTTTC
TAGCAACTGGGATTTTGCGTGGGGCATACATAGGAGTGTGAGGCAGTCAC
ACCCGTAACACGCACCCCGATCGCACCTGCTAGCACGTCTGGGAATGAAG
ATGCCTGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTCCGCGTT
TTGTGGCGGGAGCCTCATCGCCgcgtccgccctcctctttcttgtcgtTG
CCGGCAAGCGAGTTGGCATCTCAGGTAGGTTTGTAATTTTACCCGGCGTT
CTGATTCCTCGAGTGCGCTTGTGAAGCACTGTTGGACCCGTTCTCATTGT
CTCGGATCATATTTTTCACCATTTTCCAGGCCTTATCTCGGCGggccttc
tctcttctctccgcctccagccgctTGATCCATTGgctacctccttcctt
tcagcCTTTCTGGTTGCCGCACTTGCAGCCCCCTTGGTCTTtaatcctcc
ccctccccccctgctcctccctcccactgcctACGTCCTCAGTGGCCTCC
TCGTGGGGTTCGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGGT
GTCTGCGGGCTGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCAC
GTTCATGTCCGTAGGCGTCGCaatcgcctccttcctcggcgcccacccgc
accccttcttccgcgTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGCC
CTCGATCTTCCCatcccgcccgccttctgGACGCCAAGCGTCTTGCTCct
cgccgtcttcctcctcctccatcgcctcggtCAAAAAACCTCCTTTCATC
CCTGCTTGCACCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGGA
TTGGCTTTGAGCGGCATGTCGCAATCCCTCAAGGTCCTggacttcctctt
tctccgcttccccgGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCCG
CGGTGGGTCTCCTcacgcccttctccctctacATTCTCTCTCACCAAGCC
GTCGCCTACGGCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGCC
GCTAGCTACCAGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGCG
AGGCGATCTTTGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCCC
GCCCTAGTCCTGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCTG
GCCCATGTACGTGGGGGGCtacctgctggaggaggcgctggagagGGTGC
TGACACGCCGGAAAGAGGATGCTGGTAAAAAAGAatgagaaagagagaag
tAGGTAGCAAAAATAAAGtagggaaagggatggctTGAAATTTTTCTGCT
TAACGCAGGCTGAAAGACGTGTAAGTGTATGACCTCACGGGAATCGGCGC
GATGTCGATGCGTTGGTTAGATTTGTCTAGAAATGTATCAAGGACCACAC
ATTTTATCTGGAAAGGAATAGGGGACATCAGAAAATGACTCAAGGTcaca
aagggaagaaagaaatttCCAATTTGGAGAAATCGGCGCTGCTGCGCTCA
TAGAATCAGACCATCATAATTTCCATGCAATCGTCACCTTTAATCTGCTT
TTCAGTAAAGATACATATAATGATCCGTACCTTGCGTGTCTTATCTTGAG
ATATAAGGGACCGGAGATTAATTAAAAATGCAAACC back to topCoding sequence (CDS) from alignment at CM002459.1:373701..375786+ >rna2432 ID=rna2432|Name=rna2432|organism=Nannochloropsis gaditana|type=CDS|length=2178bp|location=Sequence derived from alignment at CM002459.1:373701..375786+ (Nannochloropsis gaditana) ATGAAGATGCCTGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTC CGCGTTTTGTGGCGGGAGCCTCATCGCCgcgtccgccctcctctttcttg tcgtTGCCGGCAAGCGAGTTGGCATCTCAGGCCTTATCTCGGCGggcctt ctctcttctctccgcctccagccgctTGATCCATTGgctacctccttcct ttcagcCTTTCTGGTTGCCGCACTTGCAGCCCCCTTGGTCTTtaatcctc cccctccccccctgctcctccctcccactgcctACGTCCTCAGTGGCCTC CTCGTGGGGTTCGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGG TGTCTGCGGGCTGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCA CGTTCATGTCCGTAGGCGTCGCaatcgcctccttcctcggcgcccacccg caccccttcttccgcgTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGC CCTCGATCTTCCCatcccgcccgccttctgGACGCCAAGCGTCTTGCTCc tcgccgtcttcctcctcctccatcgcctcggtCAAAAAACCTCCTTTCAT CCCTGCTTGCACCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGG ATTGGCTTTGAGCGGCATGTCGCAATCCCTCAAGGTCCTggacttcctct ttctccgcttccccgGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCC GCGGTGGGTCTCCTcacgcccttctccctctacATTCTCTCTCACCAAGC CGTCGCCTACGGCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGC CGCTAGCTACCAGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGC GAGGCGATCTTTGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCC CGCCCTAGTCCTGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCT GGCCCATGTACGTGGGGGGCtacctgctggaggaggcgctggagagGGTG CTGACACGCCGGAAAGAGGATGCTGGTAAAAAAGAatgaATGAAGATGCC TGACTTTTCCCTGACCTACCCACAATTCACGCCGTGGTCCGCGTTTTGTG GCGGGAGCCTCATCGCCgcgtccgccctcctctttcttgtcgtTGCCGGC AAGCGAGTTGGCATCTCAGGCCTTATCTCGGCGggccttctctcttctct ccgcctccagccgctTGATCCATTGgctacctccttcctttcagcCTTTC TGGTTGCCGCACTTGCAGCCCCCTTGGTCTTtaatcctccccctcccccc ctgctcctccctcccactgcctACGTCCTCAGTGGCCTCCTCGTGGGGTT CGGGACCCGCCTGGGCAACGGATGCACATCCGGTCATGGTGTCTGCGGGC TGTCGCGTCTGTCCAAGCGAGGGGCCGTCGCTGTTATCACGTTCATGTCC GTAGGCGTCGCaatcgcctccttcctcggcgcccacccgcaccccttctt ccgcgTGGCCCCCCCAACTCCCCCGGCGTCCTCCGATGCCCTCGATCTTC CCatcccgcccgccttctgGACGCCAAGCGTCTTGCTCctcgccgtcttc ctcctcctccatcgcctcggtCAAAAAACCTCCTTTCATCCCTGCTTGCA CCTGGCTGCCTTCTTGTCCGGCGCTCTCTTTGCGCTCGGATTGGCTTTGA GCGGCATGTCGCAATCCCTCAAGGTCCTggacttcctctttctccgcttc cccgGCTGGGACCCGTCTCTTGTGGTCGTTCTTGGCGCCGCGGTGGGTCT CCTcacgcccttctccctctacATTCTCTCTCACCAAGCCGTCGCCTACG GCGACCCCTCCGTCAAGATCTACACTCCGGGAAAAGGGCCGCTAGCTACC AGCCAATCGGAGAAGGTGGATTGGCGCCTGCTTGTGGGCGAGGCGATCTT TGGAGCGGGCTGGGGCATCACTGGTATCTGTCCGGGGCCCGCCCTAGTCC TGCTTGCTCAGGGCCATCGGAAGGTGGCTCTGCTCTTCTGGCCCATGTAC GTGGGGGGCtacctgctggaggaggcgctggagagGGTGCTGACACGCCG GAAAGAGGATGCTGGTAAAAAAGAatga back to top
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