EWM28149.1, cds2415 (CDS) Nannochloropsis gaditana

Overview
NameEWM28149.1
Unique Namecds2415
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:352459..353364 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28149.1
Productglutamine cyclotransferase
Orig transcript idgnl|cribi|Naga_100004g56.9080.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:352459..353364 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR011044Quino_amine_DH_bsu
IPR007788Glu_cyclase_2
IPR015943WD40/YVTN_repeat-like_dom
Homology
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|585110494|gb|EWM28149.1| (glutamine cyclotransferase [Nannochloropsis gaditana])

HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
Query:    1 MPGYLRKWAGTLLVVAPTLTMAFAAGNPPSSSAHSGNSANNKCETSMPGPAGLKMHRGLQTRTSYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLPEAAV 301
            MPGYLRKWAGTLLVVAPTLTMAFAAGNPPSSSAHSGNSANNKCETSMPGPAGLKMHRGLQTRTSYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLPEAAV
Sbjct:    1 MPGYLRKWAGTLLVVAPTLTMAFAAGNPPSSSAHSGNSANNKCETSMPGPAGLKMHRGLQTRTSYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLPEAAV 301          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|374855679|dbj|BAL58534.1| (glutamine cyclotransferase [Candidatus Acetothermus autotrophicum])

HSP 1 Score: 236.884 bits (603), Expect = 8.041e-74
Identity = 120/233 (51.50%), Postives = 158/233 (67.81%), Query Frame = 0
Query:   65 YVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLP 297
            Y ++  F HDP AFTQGLVY +D    EGTG++G+S LR+VD  TG+VL  H L ++ FGEGIV  +DKIIQLTW+ RK  VY R+  TLL +F Y T   EGWGIT DG+RLI+SDGSA LF WD +T +EI   R+ V+D  G  V+ LNELE+ HG ++ANVW TD I  I P  G+VV + D + L     R +   VLNGIA+D + D  ++TGK++PK F++++  P
Sbjct:   50 YKVLRTFPHDPQAFTQGLVYYKDNILYEGTGMWGESSLRKVDLETGKVLQIHRLPSEIFGEGIVVWEDKIIQLTWQHRKGFVYDRETFTLLREFSYPT---EGWGITHDGSRLIMSDGSATLFIWDPETLQEI--GRIEVRDDKGPVVR-LNELEYIHGLIYANVWQTDRIAIIQPTDGRVVGWIDLTGLLAPEDRHARVDVLNGIAYDVQGDRLFVTGKYWPKLFQIQLTQP 276          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|575425313|gb|ETX08665.1| (glutamine cyclotransferase [Candidatus Entotheonella sp. TSY2])

HSP 1 Score: 227.254 bits (578), Expect = 6.309e-70
Identity = 119/235 (50.64%), Postives = 153/235 (65.11%), Query Frame = 0
Query:   64 SYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLPE 298
            SY +V  + HD  AFTQGLVYE  G   EGTGL G+S LRRV+  TG V   H L    FGEGI    ++IIQLTW+ R   VY + +  L+  F+Y T   EGWGIT DG+RLI+SDG+ANL+F + +T+ EI   R+ V D  G  V+ LNELE+  G V+ANVW TD I +ID  +G+V A+ D + L P   R S   VLNGIA+DAE D  ++TGKW+PK F+++I  PE
Sbjct:   55 SYRVVRSYPHDRQAFTQGLVYEM-GELYEGTGLRGQSSLRRVELETGAVRQEHRLPRQYFGEGITIFGNRIIQLTWQSRIGFVYDKASFQLVQQFRYPT---EGWGITHDGSRLIMSDGTANLYFLEPETFTEI--DRIEVHDDRGPVVR-LNELEYVRGDVYANVWQTDRIARIDLLTGRVAAWLDLTGLLPEADRQSRVDVLNGIAYDAEEDRLFVTGKWWPKLFEIRIVAPE 282          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|575405801|gb|ETW93042.1| (glutamine cyclotransferase [Candidatus Entotheonella sp. TSY1])

HSP 1 Score: 225.713 bits (574), Expect = 2.848e-69
Identity = 120/235 (51.06%), Postives = 152/235 (64.68%), Query Frame = 0
Query:   64 SYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLPE 298
            SY +V  + HD  AFTQGLVYE  G   EGTGL G+S LRRV+  TG V   H L    FGEGI    D+IIQLTW+ R   VY + +  L+  F Y T   EGWGIT DG+RLI+SDG+ANL+F + +T+ EI   RL V D  G  V+ LNELE+  G V+ANVW TD I +ID  +G+V A+ D + L P   R     VLNGIA+DAE+D  ++TGKW+PK F+++I  PE
Sbjct:   55 SYQVVRSYPHDRRAFTQGLVYEM-GEMYEGTGLRGQSSLRRVELETGAVRQEHQLPRQYFGEGITIFGDRIIQLTWQSRIGFVYDKASFQLVQQFSYPT---EGWGITHDGSRLIMSDGTANLYFLEPETFTEI--DRLEVYDDRGPVVR-LNELEYVRGDVYANVWQTDRIARIDLLTGRVAAWIDLTGLLPAADRQLRVDVLNGIAYDAEDDRLFVTGKWWPKLFEIRIVAPE 282          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|1041166752|emb|CUS02785.2| (Glutamine cyclotransferase [Ardenticatena])

HSP 1 Score: 212.231 bits (539), Expect = 2.661e-63
Identity = 111/235 (47.23%), Postives = 147/235 (62.55%), Query Frame = 0
Query:   64 SYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKICLPE 298
            ++ IV  F HD +AFTQGLVY  DG F EGTGL+G+S LR    ++G+VL S  L +  FGEGI   DD+IIQLTW+ER   +Y R    LL  F+Y T   EGWGIT DG RLIVSDGS+ ++FWD +T +EI   R+ V+D H   +  LNELE+ +G +WAN+W+TD I +I P +G V+ + D S L           VLNGIA D      ++TGK +P  F++ +   E
Sbjct:  107 TFQIVNTFPHDATAFTQGLVYI-DGGFFEGTGLWGESTLRETALTSGQVLRSVALESQYFGEGITLFDDRIIQLTWQERTGFIYDRATFELLQTFEYNT---EGWGITHDGQRLIVSDGSSTIYFWDPETLQEI--GRITVRD-HRGPLNLLNELEYVNGEIWANIWMTDLIARISPETGDVLGYIDLSGLLDTSNLTQPADVLNGIAHDPVTGRLFVTGKLWPSIFEIVVVPKE 334          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|299116412|emb|CBN74677.1| (Glutamine cyclotransferase [Ectocarpus siliculosus])

HSP 1 Score: 214.927 bits (546), Expect = 3.801e-63
Identity = 119/248 (47.98%), Postives = 156/248 (62.90%), Query Frame = 0
Query:   53 LKMHRGLQTRTSYVIVEEFAHDPSAFTQGLVYEEDGTFL-EGTGLYG-KSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLR----VSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKI 294
            LK   G      + ++ E+ HD  AFTQGL Y  +G FL E TGLYG KS +R+VD  TG+VL S  L    FGEG+V  DDKI  LTW+ +    +  +       F + T+TG+GWGITTDG  LIVSDGS  LFFWD  T KE     + ++DG    +K LNELE   GYV+ANVW  D++ +IDPA+G+VV  ++FS L+P  L+     S + VLNGIA+D E D+ YLTGK +P+ +KVK+
Sbjct:  170 LKTRGGQLAFARFSLLAEYPHDQHAFTQGLCY--NGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLDDKYFGEGMVITDDKIHSLTWRSKVGFSWDLETFEPQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMKETRRVEVKLKDGR--PLKKLNELEVVKGYVFANVWFDDNLYKIDPATGEVVDAYNFSELYPKALQKKELTSREAVLNGIAWDPEEDVLYLTGKLWPRMYKVKL 413          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|500004581|ref|WP_011685299.1| (glutamine cyclotransferase [Candidatus Solibacter usitatus] >gi|116225829|gb|ABJ84538.1| glutamine cyclotransferase [Candidatus Solibacter usitatus Ellin6076])

HSP 1 Score: 206.838 bits (525), Expect = 2.913e-62
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 0
Query:   64 SYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKIC 295
            +Y IV  + HDP AFTQGL+Y  DG   EGTGL  +S +R+V   TGEVL   D+    FGEGIV   D++++LTWK  K ++Y   +     +F Y    GEGWG+TTDG R+I+SDGSA+L FWD +T KE    R+ V D +G  V  LNELEW  G V+ANVW T+ I +IDP +GKVV + D   L       +   VLNGIA+DA+ D  ++TGK +PK F++K+ 
Sbjct:   27 TYQIVHTYHHDPMAFTQGLLYL-DGVLYEGTGLEEQSSIRKVKLETGEVLQKRDVPGIYFGEGIVVWKDRLLELTWKAEKGIIYDLASFNPKGEFPY---PGEGWGLTTDGKRIIMSDGSADLRFWDPETLKET--GRITVTD-NGRPVDRLNELEWVKGEVYANVWQTERIARIDPKTGKVVGWIDLHGLLTPADTTADTDVLNGIAYDAKGDRLFVTGKKWPKLFEIKLV 251          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|1101257183|gb|OIQ02451.1| (glutamine cyclotransferase [Syntrophobacteraceae bacterium CG2_30_61_12])

HSP 1 Score: 204.527 bits (519), Expect = 1.711e-61
Identity = 107/227 (47.14%), Postives = 145/227 (63.88%), Query Frame = 0
Query:   67 IVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVK 293
            +V  + HDP+AFTQGLVY  +G   E TGL G+S LRR+D ++G V    +L+A  F EG+  +D KI QLTW+ R   +Y +    LL  F Y    GEGWG+T DG RLI+SDGSA L+F D +TY+ +  S++ V+DG    V  LNELE+  G V+ANVW+T+ I  IDPA+G V A+ D   L     R   + VLNGIAFDA +   ++TGK +PK F+++
Sbjct:   27 VVRTYPHDPAAFTQGLVYA-NGVLYESTGLEGRSSLRRIDLASGRVERIRELAAPHFAEGLTVLDGKIFQLTWRSRVGFIYDQATFQLLGTFPY---AGEGWGLTQDGTRLIISDGSATLYFLDPETYRRV--SQVQVRDGS-RPVTRLNELEFIEGRVYANVWMTERIAIIDPATGLVEAWLDLHGLLRPEDRRGAEDVLNGIAFDAASGRIWVTGKLWPKLFEIE 246          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|493557023|ref|WP_006510516.1| (glutamine cyclotransferase [Xenococcus sp. PCC 7305] >gi|442792908|gb|ELS02371.1| glutamine cyclotransferase [Xenococcus sp. PCC 7305])

HSP 1 Score: 205.297 bits (521), Expect = 1.782e-61
Identity = 111/234 (47.44%), Postives = 153/234 (65.38%), Query Frame = 0
Query:   61 TRTSYVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKI 294
            T   Y IV  + HD +AFTQGLVY E G F EGTGL G+S LR+VD  TG+VL S +L    FGEGI   +DK+IQLTWK +   VY R++ T L +F Y T   +GWG+T D   LI+SDGS +LFF D  T++E+   R+ V+D     VK LNELE+ +G ++AN+W++D I +I P SG+V+ + D S L    L  + D VLNGIA+D +ND  ++TGK +   F++++
Sbjct:   40 TSCGYQIVNTYPHDNNAFTQGLVYYE-GDFYEGTGLNGRSSLRKVDLETGQVLQSINLDDKYFGEGITLFEDKLIQLTWKAQTGFVYDRESFTKLQEFNYAT---DGWGLTHDDEYLIMSDGSDSLFFLDPVTFEEV--KRIAVRD-RDQPVKKLNELEYINGEIYANIWMSDRIARISPTSGQVLGWLDLSGLKDSGLIFNRDAVLNGIAYDHQNDRLFVTGKLWSDLFEIEV 266          
BLAST of EWM28149.1 vs. NCBI_GenBank
Match: gi|1176210513|gb|OQY21519.1| (glutamine cyclotransferase [Anaerolineaceae bacterium 4572_32.1])

HSP 1 Score: 203.756 bits (517), Expect = 5.097e-61
Identity = 105/231 (45.45%), Postives = 145/231 (62.77%), Query Frame = 0
Query:   65 YVIVEEFAHDPSAFTQGLVYEEDGTFLEGTGLYGKSKLRRVDASTGEVLVSHDLSADSFGEGIVAVDDKIIQLTWKERKALVYGRQNLTLLNDFKYETVTGEGWGITTDGARLIVSDGSANLFFWDKDTYKEIPESRLLVQDGHGNAVKHLNELEWAHGYVWANVWLTDDIVQIDPASGKVVAFHDFSALFPHHLRVSLDQVLNGIAFDAENDIFYLTGKWFPKYFKVKIC 295
            Y I+  + HD +AFTQGL+++ DG F EGTGL G+S LR+V+  +G++L    L    FGEG+   +DKI QLTW+     VY + +  LL  F Y T   EGWGIT DG +LI+SDG+  L FWD +T +EI   ++   DG    V  LNELE+ HG ++ANVW TD I +IDP +G+V  + +   L     R     VLNGIA+DAEND  ++TGK +PK F++++ 
Sbjct:   32 YKIINTYPHDRNAFTQGLIFQ-DGIFYEGTGLRGRSTLRKVELESGQILQIGALPDQLFGEGVTVFEDKIFQLTWQSNIGFVYDKNSFELLRTFNYPT---EGWGITHDGKQLIMSDGTPTLHFWDPETLEEIGHIQVYDDDG---PVTRLNELEYIHGEIYANVWQTDRIARIDPQTGQVTGWINLQGLLSQEDRSQPVDVLNGIAYDAENDRLFVTGKLWPKLFEIELI 255          
The following BLAST results are available for this feature:
BLAST of EWM28149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110494|gb|EWM28149.1|0.000e+0100.00glutamine cyclotransferase [Nannochloropsis gadita... [more]
gi|374855679|dbj|BAL58534.1|8.041e-7451.50glutamine cyclotransferase [Candidatus Acetothermu... [more]
gi|575425313|gb|ETX08665.1|6.309e-7050.64glutamine cyclotransferase [Candidatus Entotheonel... [more]
gi|575405801|gb|ETW93042.1|2.848e-6951.06glutamine cyclotransferase [Candidatus Entotheonel... [more]
gi|1041166752|emb|CUS02785.2|2.661e-6347.23Glutamine cyclotransferase [Ardenticatena][more]
gi|299116412|emb|CBN74677.1|3.801e-6347.98Glutamine cyclotransferase [Ectocarpus siliculosus... [more]
gi|500004581|ref|WP_011685299.1|2.913e-6247.84glutamine cyclotransferase [Candidatus Solibacter ... [more]
gi|1101257183|gb|OIQ02451.1|1.711e-6147.14glutamine cyclotransferase [Syntrophobacteraceae b... [more]
gi|493557023|ref|WP_006510516.1|1.782e-6147.44glutamine cyclotransferase [Xenococcus sp. PCC 730... [more]
gi|1176210513|gb|OQY21519.1|5.097e-6145.45glutamine cyclotransferase [Anaerolineaceae bacter... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2423rna2423Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications