Naga_100004g52, gene2312 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g52
Unique Namegene2312
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:339574..343511 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g52
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:339574..343511 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01290NO05G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2418rna2418-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2419rna2419-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2418rna2418Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2419rna2419Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2418

>rna2418-protein ID=rna2418-protein|Name=rna2418|organism=Nannochloropsis gaditana|type=polypeptide|length=1014bp
MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEER
QRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGL
ATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAH
READVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTR
GRARALQTDERSLALEMGHAGERRRWYPGQYVDVKGMDRMSRVLLGSLLE
SMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFK
ISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSW
SSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLL
MLRRLEAYFVPLVENMEEEAVAEGLDEEEQKEGEEEKNEEGSGGVEGGGN
LSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAP
LLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGE
DLTSNPGIARPGRVPVERGRGRRGRDRGREGSGRRKERERENALGTAGIE
EEGRAGSVVQNSAEMPLSPTPLAHLPMLRSRASALQDEETQIAGAGADDG
RGEGRDGSHGRRVRSRLDFGSSSDSSRVTSLAIESSSSSHAVESDSRGGR
RSAGGSRGRSRRPPTAGSTSLMVRPRPRSRDRSPSPETALRLLVATESLA
SRSASLNAGAVGDGSGRGGGLTGVGEIHIHAFVTPMGGSVGRFGGEGGGG
DRNRPSNTDVTVVEQNRGVLSSSSATSGRPGREQDRQESGAGRGDGGGAG
GRVLDVNSWSSALHRHQQQQQQQQIQQFFQQQHQPQLPQQIQQSSSPQQP
QEQEQEQDIARSSNVLSASAGHNSGRRGVSIFSGLGGGLVAPPSLLPIST
GSSSGHLRSAASIRARNDSGGTTGQARIDLEDSREGGGQSHSRTGAISPL
SSFIPFLRRFSRYG
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protein sequence of rna2419

>rna2419-protein ID=rna2419-protein|Name=rna2419|organism=Nannochloropsis gaditana|type=polypeptide|length=937bp
MVTPSDSSIMLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEER
QRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRTGL
ATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAGVLAPVPGGAH
READVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTR
GRARALQTDERSLALEMGHAGERRRWYPGQYVDVKDTVHQWLEAQVLSVD
EERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLA
APRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDE
EEQKEGEEEKNEEGSGGVEGGGNLSPWRAEQLREERLQGSRGNRRSRKGH
QQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETS
VPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVPVERGRGRRGRDR
GREGSGRRKERERENALGTAGIEEEGRAGSVVQNSAEMPLSPTPLAHLPM
LRSRASALQDEETQIAGAGADDGRGEGRDGSHGRRVRSRLDFGSSSDSSR
VTSLAIESSSSSHAVESDSRGGRRSAGGSRGRSRRPPTAGSTSLMVRPRP
RSRDRSPSPETALRLLVATESLASRSASLNAGAVGDGSGRGGGLTGVGEI
HIHAFVTPMGGSVGRFGGEGGGGDRNRPSNTDVTVVEQNRGVLSSSSATS
GRPGREQDRQESGAGRGDGGGAGGRVLDVNSWSSALHRHQQQQQQQQIQQ
FFQQQHQPQLPQQIQQSSSPQQPQEQEQEQDIARSSNVLSASAGHNSGRR
GVSIFSGLGGGLVAPPSLLPISTGSSSGHLRSAASIRARNDSGGTTGQAR
IDLEDSREGGGQSHSRTGAISPLSSFIPFLRRFSRYG
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Synonyms
Publications