NO05G01290, NO05G01290 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G01290
Unique Name	NO05G01290
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4725
Alignment location	chr5:366490..371214 +

Link to JBrowse

Properties


Property Name	Value
Description	Ubiquilin

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:366490..371214 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016197	Chromodomain-like
IPR029071	Ubiquitin-rel_dom
IPR000626	Ubiquitin-like

Homology

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BLAST of NO05G01290 vs. NCBI_GenBank
Match: EWM28302.1 (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 352.1 bits (902), Expect = 6.100e-93
Identity = 240/497 (48.29%), Postives = 272/497 (54.73%), Query Frame = 0

Query:    1 MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGA-GEVPLDPRSLEHVRQGLLTMQSLLAGMEDP----------------ARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGL-------------REGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAPLLDRFGRLLADLAPHVAALG--------ALDAATSAVDAYPFGIAAGAG-------GRSRMGMAP 453
            ML+ITIKTLQLGDF LQVPAESSV ALKVQVK+ TQIPE+RQRLIYRGRVLQDGE L TY VE GHTIHCVARP  +P SS+    P+      G   G A  GAY+R+LMGG   F                          V +  P GA  E  ++P+SLEHVRQGL+TM SLL+GM+ P                +  R                M   G R R +       GQ+VDVKDTVHQWLEAQ+LSVD   RTCRVTYLGWP RWDET+SWSSPRIAPFRTRTTH +QAP+LSP+P++A RL +PV GRDD+RRVLPEVLLM R+LE  FVPLVE +EE  V EGL                XXXXXXX                                                D APLLDRFGRLLADLAPHVA L          +D  TS  D     + AG G       G +R G  P
Sbjct:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRT-----GLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAG-------VLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWY------PGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDXXXXXXXXXXXXXXXXXXXXXXGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVP 488

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: EWM28303.1 (ubiquitin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 318.2 bits (814), Expect = 9.800e-83
Identity = 240/574 (41.81%), Postives = 272/574 (47.39%), Query Frame = 0

Query:    1 MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGA-GEVPLDPRSLEHVRQGLLTMQSLLAGMEDP----------------ARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVK-----------------------------------------------------------------------------DTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGL-------------REGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAPLLDRFGRLLADLAPHVAALG--------ALDAATSAVDAYPFGIAAGAG-------GRSRMGMAP 453
            ML+ITIKTLQLGDF LQVPAESSV ALKVQVK+ TQIPE+RQRLIYRGRVLQDGE L TY VE GHTIHCVARP  +P SS+    P+      G   G A  GAY+R+LMGG   F                          V +  P GA  E  ++P+SLEHVRQGL+TM SLL+GM+ P                +  R                M   G R R +       GQ+VDVK                                                                             DTVHQWLEAQ+LSVD   RTCRVTYLGWP RWDET+SWSSPRIAPFRTRTTH +QAP+LSP+P++A RL +PV GRDD+RRVLPEVLLM R+LE  FVPLVE +EE  V EGL                XXXXXXX                                                D APLLDRFGRLLADLAPHVA L          +D  TS  D     + AG G       G +R G  P
Sbjct:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRT-----GLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAG-------VLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWY------PGQYVDVKGMDRMSRVLLGSLLESMMVRRGKRSPVTRTQPINRLRVSLTCAHSSMVADVAGRNCRSSNIAYFKISSRPSRLPCPADTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPEVLLMLRRLEAYFVPLVENMEEEAVAEGLDXXXXXXXXXXXXXXXXXXXXXXGNLSPWRAEQLREERLQGSRGNRRSRKGHQQLERSRAARRRQAVVLARDTAPLLDRFGRLLADLAPHVATLWETAEETSVPVDGMTSETDGMEGAVTAGDGEDLTSNPGIARPGRVP 565

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_005852763.1 (ubiquilin [Nannochloropsis gaditana CCMP526] >EKU23071.1 ubiquilin [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 313.5 bits (802), Expect = 2.400e-81
Identity = 182/329 (55.32%), Postives = 209/329 (63.53%), Query Frame = 0

Query:    1 MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGA-GEVPLDPRSLEHVRQGLLTMQSLLAGMEDP----------------ARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPE 313
            ML+ITIKTLQLGDF LQVPAESSV ALKVQVK+ TQIPE+RQRLIYRGRVLQDGE L TY VE GHTIHCVARP  +P SS+    P+      G   G A  GAY+R+LMGG   F                          V +  P GA  E  ++P+SLEHVRQGL+TM SLL+GM+ P                +  R                M   G R R +       GQ+VDVKDTVHQWLEAQ+LSVD   RTCRVTYLGWP RWDET+SWSSPRIAPFRTRTTH +QAP+LSP+P++A RL +PV GRDD+RRVLPE
Sbjct:   10 MLSITIKTLQLGDFQLQVPAESSVSALKVQVKDCTQIPEERQRLIYRGRVLQDGEHLSTYNVEAGHTIHCVARPAGVPVSSSQPPVPRT-----GLATGTAPGGAYRRILMGGPHVFGGRGGSLAAGMAAAAASAG-------VLAPVPGGAHREADVNPQSLEHVRQGLMTMYSLLSGMQAPTAMVQGSAGEGSGQTASMTRGRARALQTDERSLALEMGHAGERRRWY------PGQYVDVKDTVHQWLEAQVLSVDEERRTCRVTYLGWPRRWDETLSWSSPRIAPFRTRTTHNLQAPFLSPTPLAAPRLPLPVRGRDDLRRVLPE 320

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_008874601.1 (hypothetical protein H310_10115 [Aphanomyces invadans] >ETV96824.1 hypothetical protein H310_10115 [Aphanomyces invadans])

HSP 1 Score: 146.7 bits (369), Expect = 3.900e-31
Identity = 117/348 (33.62%), Postives = 159/348 (45.69%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD----VMPPSSASAYAPQPLGGPGGGI--------LGAASAGAYQRLLMGGSRGF-PXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTH-TMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVL 336
            + I IKTL    F L V    S++ LK  ++  T +P  RQRLIYRG++L+DG+ L  Y VE GHT+H VARPD       P+  S+    PL      +           AS+ A  R  +G   GF                             S  P         P S+EH+RQGLLT+QS+L+    P                      E    +R F       GQ++DVKDTV+QWLE  IL V+  E    V Y GWPSRWDE I   SPR+A FRTRT H    + +LSP+P+ AS      + +  +R +LP++  +  ++    +P V E+   L
Sbjct:   48 MEIRIKTLNDHTFSLTVARSVSIRDLKTTLQTTTAVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHTVHMVARPDRAQQPTSPTPLSSSRLAPLHDTAEMLQSRLARLDASTASSLATMRRRLGVDSGFATSLPAASRMHHDRLDFLRSRYGPSDSTPSNEPESEASTIAPPPSVEHIRQGLLTIQSMLSLPATPVAA------------------GEPSPPSRQFFV-----GQWLDVKDTVNQWLEGTILEVN--EDQVFVHYHGWPSRWDEWIDRKSPRLAAFRTRTLHGAGTSRHLSPAPMLASHQPAAGSTQTTIRTLLPQLQSVLHEM----LPFVNELASAL 366

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_008609693.1 (hypothetical protein SDRG_05739 [Saprolegnia diclina VS20] >EQC36911.1 hypothetical protein SDRG_05739 [Saprolegnia diclina VS20])

HSP 1 Score: 142.5 bits (358), Expect = 7.400e-30
Identity = 113/335 (33.73%), Postives = 155/335 (46.27%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD-VMPPSSASAYAPQPLGGPGGGI-----------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPL---DPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSP-VSASRLQMPVTG-------RDDVRRVLPEV 314
            + I IKTL    F LQV    +V  LK  ++  TQ+PE RQRLIYRG++++D + L  Y VE GHT+H VA+P+ +      SA   +PL  P   +           L +A+A A  R  +G                              L  +  P      P    DP   EH+ QGLLT+++LL+ +                         E G   R  +  +   GQ++DVKDTV+QWLE  +L +       RV Y GWP+RWDE I   SPR+A FRTRT H   +P+LSP+P V ++R   P T        RD +R +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLDEDGSLLSDALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDP--FEHIEQGLLTLRTLLSTVTSATPTETTSA--------------ERGATLR--ARRLFYVGQWLDVKDTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_008609692.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC36912.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 142.5 bits (358), Expect = 7.400e-30
Identity = 113/335 (33.73%), Postives = 155/335 (46.27%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD-VMPPSSASAYAPQPLGGPGGGI-----------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPL---DPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSP-VSASRLQMPVTG-------RDDVRRVLPEV 314
            + I IKTL    F LQV    +V  LK  ++  TQ+PE RQRLIYRG++++D + L  Y VE GHT+H VA+P+ +      SA   +PL  P   +           L +A+A A  R  +G                              L  +  P      P    DP   EH+ QGLLT+++LL+ +                         E G   R  +  +   GQ++DVKDTV+QWLE  +L +       RV Y GWP+RWDE I   SPR+A FRTRT H   +P+LSP+P V ++R   P T        RD +R +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPAIAVSELKEMLRTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPARSVLRPQLRPRQSRLDSAAAFASMRRRLGLDEDGSLLSDALNFRQPRPTAPVPSDAERALDLTSEPESEARPPAVVHDP--FEHIEQGLLTLRTLLSTVTSATPTETTSA--------------ERGATLR--ARRLFYVGQWLDVKDTVNQWLEGTVLELSATH--VRVHYHGWPTRWDEWIEKISPRLAAFRTRTLHPTGSPFLSPTPIVRSARSTPPPTARSLVPQIRDALRDMLPYV 336

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: OQR99365.1 (ubiquitin family protein [Achlya hypogyna])

HSP 1 Score: 138.7 bits (348), Expect = 1.100e-28
Identity = 110/342 (32.16%), Postives = 150/342 (43.86%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAP---QPLGGPGGGI---------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDP------------------RSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRDDVRRVLPEV 314
            + I +KTL    F L V     V  LK  +   TQ+PE RQRLIYRG++L+DG+ L  Y +E GHT+H VA+PD        A+ P   +PL  P   +         L +A+A A  R  +G   G                                PPG      DP                   SLEH+ QGL+T+++LL+    P                      + G   RS        GQ++DVKDTV+QWLE  +L V        + Y GWP+RWDE I   SPR+A FRTRT HT  +P+LSP+P     ++ P      VR ++P++
Sbjct:    7 MEIRVKTLNDHSFALTVARTIGVTELKAMLLPATQVPEARQRLIYRGKLLKDGDLLSAYNIENGHTLHMVAKPD-----RIVAFEPDETEPLLAPTRNVTRTRLQPRRLDSAAAFASMRRRLGLDDG-------------GSLLANTSPTATSQAPPSEPPGGTVSDRDPIPDVFAEPEPESIPPPTNDSLEHLTQGLMTIRTLLSTASAPTE---------------TVPAPDRGAVLRSRREFFV--GQWLDVKDTVNQWLEGTVLEVSASH--VHIHYHGWPTRWDEWIEKPSPRLAAFRTRTLHTSASPFLSPTPA----VRQPRAPTTTVRALVPQI 307

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_012196614.1 (hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65] >KDO32968.1 hypothetical protein SPRG_02660 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 138.3 bits (347), Expect = 1.400e-28
Identity = 113/335 (33.73%), Postives = 153/335 (45.67%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD-VMPPSSASAYAPQPLGGPGGGI-----------LGAASAGAYQRLLMGGSRGFPXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLL---AGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSAS-RLQMPVTG-------RDDVRRVLPEV 314
            + I IKTL    F LQV    +V  LK  ++  TQ+PE RQRLIYRG++++D + L  Y VE GHT+H VA+P+ +      SA   +PL  P   +           L +A+A A  R  +G                              L  +  P      P  P   EH+ QGLLT+++LL   A    PA                     E G   R  +  V   GQ++DVKDTV+QWLE  +L +        V Y GWP+RWDE +   SPR+A FRTRT H   +P+ SP+P++ S R   P T        RD +R +LP V
Sbjct:   22 IEIRIKTLNDHSFALQVRPGIAVSELKAMLQTTTQVPEHRQRLIYRGKLMKDADQLAAYNVEDGHTLHLVAKPEQIYSADGTSASETEPLLPPSRNVLRSQLRPRQSRLDSAAAFASMRRRLGLDEDGSLLSDALNFRHARSTASLPSDADTRLDLTPEPEPEARPPAVP--FEHIEQGLLTIRTLLSTAASATPPA-----------------TTGAERGATLR--ARRVFYVGQWLDVKDTVNQWLEGTVLELSATH--VLVHYHGWPTRWDEWVEKISPRLAAFRTRTLHPTGSPFQSPTPIARSARSTPPPTARSLMPQIRDALRDMLPYV 333

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_009841212.1 (hypothetical protein H257_14963 [Aphanomyces astaci] >ETV69355.1 hypothetical protein H257_14963 [Aphanomyces astaci])

HSP 1 Score: 131.3 bits (329), Expect = 1.700e-26
Identity = 107/344 (31.10%), Postives = 154/344 (44.77%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD------------------VMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGF----PXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRD---DVRRVLPEVLLMFRQL 321
            + I IKTL    F L VP   S++ LK  ++  T +P  RQRLIYRG++L+DG+ L  Y VE GH +H VARP+                     P   +A   Q           ++ A   QRL      GF    P                         + S     A   P+ P S+EH+RQGL+T+QS+L+     +R                       +R R F       GQ++DVKDTV+QWLE  +L ++       V Y GWP+RWDE I  +SPR+A FRTRT H   + +LSP+P  ++  Q+     D    +R +LP++  +  ++
Sbjct:   27 MEIRIKTLNDHTFSLTVPRAISIRDLKTTLQGTTSVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHMVHMVARPEXXXXXXXXXXXXXXXXXXXXAPLHDTAELLQSRLARLDASTASSLATMRQRLGAAVDSGFSSMPPPSSQVHHDRLQFLRSRYGNPHDASPLASEPESEASTAPVLP-SVEHIRQGLMTVQSMLSLPATSSR------------DDGLSPASAAPIRRRQFFI-----GQWLDVKDTVNQWLEGTVLDLN--VHQVYVHYHGWPTRWDEWIDATSPRLAAFRTRTLHANTSRHLSPAPSLSNPQQVMPASADTPTTIRALLPQMRSVLHEM 350

[Close]

BLAST of NO05G01290 vs. NCBI_GenBank
Match: XP_009841213.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV69356.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 131.3 bits (329), Expect = 1.700e-26
Identity = 107/344 (31.10%), Postives = 154/344 (44.77%), Query Frame = 0

Query:    2 LNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRVLQDGEALQTYKVEPGHTIHCVARPD------------------VMPPSSASAYAPQPLGGPGGGILGAASAGAYQRLLMGGSRGF----PXXXXXXXXXXXXXXXXXXXXXXXXLVGSGGPPGAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNXXXXXXXXXXXXXXXMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRVTYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPVTGRD---DVRRVLPEVLLMFRQL 321
            + I IKTL    F L VP   S++ LK  ++  T +P  RQRLIYRG++L+DG+ L  Y VE GH +H VARP+                     P   +A   Q           ++ A   QRL      GF    P                         + S     A   P+ P S+EH+RQGL+T+QS+L+     +R                       +R R F       GQ++DVKDTV+QWLE  +L ++       V Y GWP+RWDE I  +SPR+A FRTRT H   + +LSP+P  ++  Q+     D    +R +LP++  +  ++
Sbjct:   27 MEIRIKTLNDHTFSLTVPRAISIRDLKTTLQGTTSVPPQRQRLIYRGKLLRDGDLLSAYNVEDGHMVHMVARPEXXXXXXXXXXXXXXXXXXXXAPLHDTAELLQSRLARLDASTASSLATMRQRLGAAVDSGFSSMPPPSSQVHHDRLQFLRSRYGNPHDASPLASEPESEASTAPVLP-SVEHIRQGLMTVQSMLSLPATSSR------------DDGLSPASAAPIRRRQFFI-----GQWLDVKDTVNQWLEGTVLDLN--VHQVYVHYHGWPTRWDEWIDATSPRLAAFRTRTLHANTSRHLSPAPSLSNPQQVMPASADTPTTIRALLPQMRSVLHEM 350

The following BLAST results are available for this feature:

BLAST of NO05G01290 vs. NCBI_GenBank

BLAST of NO05G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28302.1	6.100e-93	48.29	ubiquitin-like protein [Nannochloropsis gaditana]	[more]
EWM28303.1	9.800e-83	41.81	ubiquitin-like protein [Nannochloropsis gaditana]	[more]
XP_005852763.1	2.400e-81	55.32	ubiquilin [Nannochloropsis gaditana CCMP526] >EKU2...	[more]
XP_008874601.1	3.900e-31	33.62	hypothetical protein H310_10115 [Aphanomyces invad...	[more]
XP_008609693.1	7.400e-30	33.73	hypothetical protein SDRG_05739 [Saprolegnia dicli...	[more]
XP_008609692.1	7.400e-30	33.73	hypothetical protein, variant [Saprolegnia diclina...	[more]
OQR99365.1	1.100e-28	32.16	ubiquitin family protein [Achlya hypogyna]	[more]
XP_012196614.1	1.400e-28	33.73	hypothetical protein SPRG_02660 [Saprolegnia paras...	[more]
XP_009841212.1	1.700e-26	31.10	hypothetical protein H257_14963 [Aphanomyces astac...	[more]
XP_009841213.1	1.700e-26	31.10	hypothetical protein, variant [Aphanomyces astaci]...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL087	nonsL087	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL086	nonsL086	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR118	ngnoR118	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003742	NSK003742	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G01290.1	NO05G01290.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|390356	gene_2920	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100004g52	gene2312	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G01290.1	NO05G01290.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G01290 ID=NO05G01290|Name=NO05G01290|organism=Nannochloropsis oceanica|type=gene|length=4725bp
ATGCTGAACATCACCATCAAGACGCTGCAGCTGGGCGACTTCCACCTCCA
AGTGCCGGCTGAATCCTCTGTACAGGCGCTTAAAGTCCAAGTCAAGgtaa
gaagaaggtgtgaggtggaaagagacgaaagacgaaggaccagaggagga
gactgggaccagcatcctcatgatggtgttgccacagcaaatcagacacc
cactcgacctttgaactgaatccaagtcatatcaccgtgctatgatacca
ggcaagctttgaggcgggccggcatgaggttcttcacactcgacgccgtc
aatccgccatttacgcacaaatatatcccactctccccaaggacgtatct
cactaaatttcccccaatgcacacagGAACAAACCCAAATTCCCGAAGAC
CGTCAACGGTTGATCTACCGCGGACGCGTCCTACAAGATGGAGAGGCCCT
TCAAACATACAAAGTGGAGCCCGGGCACACCATTCACTGTGTCGCCCGTC
CAGATGTTATGCCTCCCTCCTCCGCCTCAGCTTATGCTCCCCAACCTCTA
GGTGGACCGGGCGGCGGTATTTTGGGCGCGGCATCTGCGGGTGCCTACCA
ACGATTGCTCATGGGAGGCTCGCGTGGCTTTCCACGTCCTGGTGGCGGGG
AAGGAGGAGGGCCAGGGGGAAGTTATGCTGCGGGCATGGCGGCAGCAGCT
GCTGGATTGGTAGGGAGTGGGGGGCCACCAGGAGCAGGGGAGGTACCATT
GGATCCGCGAAGCTTAGAGCATGTGCGACAGGGGTTGTTGACGATGCAAA
GCCTGCTGGCGGGGATGGAAGACCCGGCGAGGGGGAGGAACAGCAGAAGC
AGCACCAGCAGCACCAGCAGCAGCAGGGGGAGGGGGATGGATGAGGAAGG
GATGAGGACAAGGTCTTTTTCTGCGGCAGTTGCAGCGGATGgtaggggag
ggaaaagtagattaggaaacagagcggcggcagcgacggctgtccgcgcg
ccaccaatggcgtctgcaccagcagcggtggagggaggagctgtaggggg
ggggatggcgatggtggtggggttggagatcgggtttgttggtttccagG
GCAATTTGTAGATGTAAAAGgtacgcgtaaaagtgagcctctctgtcgta
tttcaaatctgggagctagttgagctttcatttccccttccatccaaaga
gaggtgatgggtttttgaaagtgcattttttccgcccctcatttcatccc
tcccttccttaccactggctgcctccctctctcccccctccagACACTGT
GCACCAATGGTTGGAGGCCCAAATCCTGTCCGTGGATCCCTGCGAACGTA
CCTGTCGGGTGACGTACCTCGGGTGGCCCTCGCGTTGGGACGAGACCATT
TCGTGGAGTAGCCCCCGCATTGCTCCTTTTCGCACGCGGACGACACATAC
CATGCAGGCGCCCTACTTATCTCCTTCCCCTGTGTCTGCGTCACGGTTGC
AGATGCCTGTGACGGGGAGGGACGATGTGAGGAGGGTATTACCGGAGGTG
TTGTTGATGTTCAGGCAGTTGGAAAGGGTGTTTGTACCGCTTGTAGAGGA
GGTGGAGGAGGTGTTGGTGAGGGAGGGATTGAGGGAGGGGGAAGAAAAGG
AGGAGGAGGACAAGAAGGAGGAAGGGGGTGAGGGGGGGAGGAGGgtaaga
aggaggagagggaagagggaggagaggaggggagcgagacagggagtttg
acgccgtgggcggcggagcgggagcgagaggagcgctttttgcagTTGCG
GCAAAATCGACGGAGAAGGGAGCAGCAGGGAGAGAAGGGACAGCAAGAGC
AGCAGGATAGGGCTGCTGCTGCAGCAGCTGCTGCTGCTGCTGCTGTCTTG
GCGAGGGATGCAGCGCCCTTGTTAGATCGCTTTGGACGGTTGCTTGCAGA
TTTGGCACCGCATGTAGCGGCGCTTGGTGCTCTTGATGCTGCTACCTCCG
CTGTCGATGCTTATCCTTTTGGTATAGCTGCGGGTGCTGGAGGGAGATCA
AGGATGGGGATGGCTCCTTCTTCAGCTATGTCGGCATCTAGTCTGCGGCA
AGAAGCAGCGGCAGGAATGAGGAGCATGAGCAGCAGCACCAGCAGCACCA
GTAGTAATGCTTGTGTCCCCGCTGGGGATGGTGAGAATTATGAAGGAAGA
GAATCTAGAGCAACGGGAAGGTGGATGCAAGTAGGAGGAGAGGGAGGGAA
AGGAGGAGTAGGAGGAGGGAGGGCAGAAGTGAGACGAGGACGACGGGCAC
GAGGGCAAGGAAGGAAGGGAGGAGGTGAGGAGGGCCCCATGTCCATGGAG
GAGGATGAGGAGGGAGGCAAGAGTGGGAACGATGCCGCAGATGGTGGCGG
CGGTGCTGCTGCTGGTCCTCCTCCATCACTTGCGTTGGTGCCCAGATTGC
GGAGTCGCAGCCCTGTTGAGCATGGCCGTTTTCAGCCGCAAGCGAGCGTC
ATCAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
GCAGCAGCAGCAGCAGCAGCAGCAGTGATAGTAATGATGCTGGTGGTGGA
GGAGGAGGAGGAGGAGAAGGAAGAGGAGGAGAGGGAGGAAGAGTGGGGGG
CGGACCGATTGAGGGACGACGTGTGCGAAGTCGGTTGGGCTTGGATAGCA
GCAGCAACAGTAACAGCAACAACAGCAATAGTGTCACCACATCAAGGACG
GCCACCACTACCCACAGGAACGGCAGTGACACAAGCAGCAGTTACAGCAG
CAGCATTCGCAATGGCAGTGGCAGCAGGACGAGCAACAGCCGCAGTAATC
GAGGACTTGGCAGTAGCTCCAGCAGAAGCAGTAGCAGCAGCAGCAGCCGC
AGTAGTAGTAGGAACAGCAATGGGAATCGGGCCCCGCATCTTCGTTCCCA
GGCCCGTGAACGCTCCCCCTCCCCAGAAACGGCTTTTCGTCGCTTAATAG
CCACAGAAGGTGCAGCCGCTCGTAGTGCAGCGGTCGCAGCGGCGTCGGCA
GCAGCAGGAGCAGCAGCGCATGGGAGAGGGATGGTGGGATTGGGTGAGAT
TCACATTCATGCATTTGTGACTCCGATGGGTACGATGATGGGAGGAGGCG
GAGGAGGCGGAGGAGGATACAGCAGCCGCAGTGGTAATGCGAGTTCAGCT
GCTTCCGCTGGGGTTGCTGGTGGTGTGGGTGGAGGGAATGGAATGAGAGC
AGCAGCTCCGGCATCGACTGTAGCAGCAGCGACGGCGGGAAGCAGTATTC
CGGAATCATTACTTTCTTCGTCCTCTTTCTTGCCCTCTTCCTCCTCCCTT
CCTTCGTCTACGTTTCGGAACACCCCACTAGATGGAGGAAATTTAAATTT
TGGGCCACCATTCTTCCAGCGACAGCAGCAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAGCGAGATCCATCA
AACATTTGGAGCCCGCCGGACATTGGAAGAGATGATTCCTCTATGTTTAA
TTCGGGTGTCATACACATCCCTTCGTCCTTCCATTCCTCTTCTTTACATC
AACCTCTCTCGATGGGTGGTAGTGAAGAAGTGGGAGGGGGAGCAAACGGA
GGGGAGGAATTACGGAGAGATGGTGTGGAGACCGACGAGGAGAGAGGGCG
GGAAGGAAGGCGGGAAAGAGAGCAGCGCAGTGAGGCTGACGATGGTGGGG
CCAGTAGTCCGTTGTCTTCTTTCTTGCCGTTCTTGCGGCGGTTTTCTCGG
TATGGTTGATGTAGAGAGAGAGATGTGAGGAGGATGCACGGGAGGGATGA
AGACATGAGCGGTGATAACAAGTAAAGGGAGGACATAGAGAGACTAGGGA
TACCAGAAAGCATCAGGAACTACAACATAGAAAAGATAGCGATCTAATGA
GGATCAAGGGAAGTTACCAACGATGTGAAGAGAAGGAATAGAGAGCGGAA
GGAGTAGAGGAAGGAGGAGTGAAGGTATACGTATAAAGCAGGGATAGGGT
TAACAACAGCGCTGTCTAGAACGAAACGACGCCGCAAGGCTGAACCATAG
AAAGCAGTGTAGAGGAGGTATACGCTACAGGACATACGCGTTCAGCTAGA
TGATAGGCTAGAGTGTGTAGGCCAGAAAGTGTACTAAAAAAATCATTGCG
GTAAAGCAGTTACAGCAGCCGCCTAAGAATGTCGAAATGTACAGCCAGCC
ACCCCTTTTCTTAAAGCGTGTTTTCTAATATAGTAAGGGGAAACCGCTGC
TCAGAAGGTGATGAAGACTTTCACAGATGTAGCCAGCATATCAAATAGTT
TTTCCCACACTTGAGGAATAGCGGGAGGGACAACGTGGGAGAAAACAGAT
TTTTAAAAATGAGCAATACCTTTGCTACCCCTCATTGGTTGATTGGTTGG
GGATCCAAGAGGGTTGAATGGTGTGTTTGGAGGAAAATGTGTTTGGGAAG
CTCAAATTACTCCGTTCAATTTTTGACGAATTGTTTTTGTCTTGGTTACT
GTACTGAAATTTGCTGCTCCTCAGCTGAATTTCGTCAATATAAACGTGTA
GAACATCTCACGGGCGTTTTGGCATACGCGTCTGAAGTGACATATGTAAA
AAAATTAAAAGATTATATGCATCCA

protein sequence of NO05G01290.1

>NO05G01290.1-protein ID=NO05G01290.1-protein|Name=NO05G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1049bp
MLNITIKTLQLGDFHLQVPAESSVQALKVQVKEQTQIPEDRQRLIYRGRV
LQDGEALQTYKVEPGHTIHCVARPDVMPPSSASAYAPQPLGGPGGGILGA
ASAGAYQRLLMGGSRGFPRPGGGEGGGPGGSYAAGMAAAAAGLVGSGGPP
GAGEVPLDPRSLEHVRQGLLTMQSLLAGMEDPARGRNSRSSTSSTSSSRG
RGMDEEGMRTRSFSAAVAADGQFVDVKDTVHQWLEAQILSVDPCERTCRV
TYLGWPSRWDETISWSSPRIAPFRTRTTHTMQAPYLSPSPVSASRLQMPV
TGRDDVRRVLPEVLLMFRQLERVFVPLVEEVEEVLVREGLREGEEKEEED
KKEEGGEGGRRLRQNRRRREQQGEKGQQEQQDRAAAAAAAAAAAVLARDA
APLLDRFGRLLADLAPHVAALGALDAATSAVDAYPFGIAAGAGGRSRMGM
APSSAMSASSLRQEAAAGMRSMSSSTSSTSSNACVPAGDGENYEGRESRA
TGRWMQVGGEGGKGGVGGGRAEVRRGRRARGQGRKGGGEEGPMSMEEDEE
GGKSGNDAADGGGGAAAGPPPSLALVPRLRSRSPVEHGRFQPQASVISNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSSSSSSSDSNDAGGGGGGG
GEGRGGEGGRVGGGPIEGRRVRSRLGLDSSSNSNSNNSNSVTTSRTATTT
HRNGSDTSSSYSSSIRNGSGSRTSNSRSNRGLGSSSSRSSSSSSSRSSSR
NSNGNRAPHLRSQARERSPSPETAFRRLIATEGAAARSAAVAAASAAAGA
AAHGRGMVGLGEIHIHAFVTPMGTMMGGGGGGGGGYSSRSGNASSAASAG
VAGGVGGGNGMRAAAPASTVAAATAGSSIPESLLSSSSFLPSSSSLPSST
FRNTPLDGGNLNFGPPFFQRQQQQQQQQQQQQQQQQQQQQQQRDPSNIWS
PPDIGRDDSSMFNSGVIHIPSSFHSSSLHQPLSMGGSEEVGGGANGGEEL
RRDGVETDEERGREGRREREQRSEADDGGASSPLSSFLPFLRRFSRYG*

Synonyms

Publications