rna2385, rna2385 (mRNA) Nannochloropsis gaditana

Overview
Namerna2385
Unique Namerna2385
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1848
Alignment locationCM002459.1:259343..260111 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g16.9209.mrna
Orig protein idgnl|cribi|Naga_100004g16.9209
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:259343..260111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100004g16gene2279Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2385rna2385-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28278.1cds2377Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2385 ID=rna2385|Name=rna2385|organism=Nannochloropsis gaditana|type=mRNA|length=1848bp
GGACGTCGATCCTTCGCCATGCTTCACGTCCGTCTAAGCCGCCAGCGCGT
CAAGCGCACGAAGTTGACTTCAATGACGGAGGCGTTTAAGAGAGAGGGAA
TGGGCTTGGTGTCCTCTTGTCCAGTTTGTTGACTGGCATGTGTTTGCAGA
CTTTTTGGCTAGTTTTGATTCCCTGCCTGGCTGTGGGCAACGCTGCGACG
TCATGCCTCAAGGCGATTCACGGCCCACAGTCGTTGACTTACACTCTACC
GTCCCATATCCCTTTGATTTCTCGTACACAGGTCATTGACTCGGAGGTCA
ACCCGAACAACATCAGCCCTGGCGGCCTTTAGTGTAGGCAGGTGCCTGTG
GACGAAGGAGACATCCCCTCCTTCTTTCCGCCCGCCCTAGCGCACCGGAA
GGATTGACTCTTTGAGCGGTGGTAGCGGAGGTCACAGCAAGCGACGGGCC
ACAATCATTGACACCACCTTTAACTGGTCAAAGCTATTTCTAGCTATCTA
TATACCGTAACTCTGGATTCTTCGATAGCAAGACAGCCAGATCCTCTCAG
GCGATCGTCACAGGCTAGCCAAAAACGAACCTTCAACACCACAATCTTGG
CCGAACAGAGATAAAATTCGCAATTCTTCCCATTTTCCTTCAAGCAACAC
CTATATCGACACACAATGGCTCCTCCCCAGTCGGCACCGAAACACTTTTA
CTCCAGCGTGCCTCAAACCTCGGCCATGGCGGTGTTGGCAGGGAAGCCAA
CATTCCTCGCCTGGGGCAAGCTGCGTTTCCTGCTCATGGACGCCCCTCGC
GACTGCAACCTCTCCCACTACATTCGAGAAGCCAAGCGTCATAACGTCAT
TGCCTTGGTGCGTGTGTGTGAGCCCACGTACGACACGGAAGAAGTGGAAG
CCGCGGGCATCCAGGTGTTGGACATGGGCTACGACGACGGCAGCAGCCCG
CCTCAGGACGTGATCGATCGCTGGCTGGCCCTGGTGGACGACGTTTTCAG
CAAGCCGGCGCGGCTCACCCCCTCTCTCTCGCCAGCTGCTTCATATCCGG
GTATTCAGTCAGGGAAATCGGGCGTGGCCCTCGCACGTTCCATGTCTTGG
CGCGAGAACTCCCATCAAGGGGCGGCCGCAGCTTCCCCCCAGGAACTGGA
GGAATCGGAAGAGCCAGCACCAACGATTGCCGTGCATTGCGTGGCAGGCC
TTGGGCGAGCTCCTGTTTTGGTCGCCTTGGCTCTGATCGAGCATGGTTTC
GGCGACGCTTCGGCAGTGGTGGAGTTCATTCGCTCGAAACGTCGAGGGGC
CATCAACATGCGGCAGTTGAACTACCTGGAGCAGTACCAGAAAAGAGAGG
CCGTGTCTTGCGGTGGCTGCAGCATTATGTAAGGGAGATGGTGCTGCGAG
AGAGAGAAGGAGTAGTGGGGAGGGCAAAACAGATCATGCGTCGCCAGGCG
GCCACAACGGACTGAATGGATCTGTTTACGGGTTTACATGCCATTGAAGC
CTTTTGTTGCATGGTGGCTGGGAAAGATATTATATGCGTAAGATTTTGGT
AAAGTGCAGAAGAAGAGCGCATGGGGGAGAAGGACCAGGCCCCTGGCCGC
CCGGCATGGGGTAGTGAATGAGGAGGAGCTCGATGATGTCAAACGCCGAA
GTCAAACAGTCCTTCGTCTGCCAGAGGCTCAAAGCTTGTAGAAAGCAGAA
GAAGAAAAAGCTTGCAATCATTCTACAGGGCTTGTTCTATAATTTTGATT
TCAAAGGCATATTCACAATCAAAACCATGCTCTCACAATTGAGGTGCTTT
TCGTGATAGGAGCGCTTGTTCCGTCGCATTGATTATTCCCATCTCTCC
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protein sequence of rna2385

>rna2385-protein ID=rna2385-protein|Name=rna2385|organism=Nannochloropsis gaditana|type=polypeptide|length=195bp
MLQRNSSFEVRVNVAGLLGGCCPVGAAPRVGKVLKEALGTETHVLASASL
LNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVG
HVKETALNLARFIKYKQSITESYSKVVDRYAGWSHVVGSRGETWRMSPSE
TARTVEDQEEFTMYAFACIRRDGNNQCDGTSAPITKSTSIVRAWF
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mRNA from alignment at CM002459.1:259343..260111-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2385 ID=rna2385|Name=rna2385|organism=Nannochloropsis gaditana|type=mRNA|length=769bp|location=Sequence derived from alignment at CM002459.1:259343..260111- (Nannochloropsis gaditana)
ATGCTCCAAAGGAACTCCTCGTTCGAAGTGCGCGTGAATGTGGCGGGGCT
GTTGGGGGGGTGTTGTCCAGTAGGGGCGGCGCCCCGCGTGGGGAAGGTGT
TGAAAGAGGCGCTAGGGACAGAAACGCATGTCTTAGCTTCCGCCAGCCTC
CTGAACGCCCTCATGGACCTATTTGGCAGGGACGAGCTGGATGCCGTGTT
CCAAGAGCTGAAGATGTTGCCCATGCTGACGAAAGTGTTGCCGGCATTCC
GCCTCAAGGCCAAGACGGAGGCGGGGAAGCATGGACGCGATGCGGTCGGT
CACGTGAAAGAAACGGCTTTGAATCTAGCGCGCTTCATCAAGTATAAACA
GAGGTGACATTGCCTACCTCCGGGTACCCTTCCCCGCCTTGTCCACAGAC
GTATTGATGGCAAGTGAAGAAGGGCCGTCTTTTCCTGCCTCTGCGACTGG
CGCCGTGTACCTTCAGCATCACGGAGTCTTACTCGAAAGTCGTTGACCGA
TACGCCGGGTGGTCGCACGTCGTGGTGCGTGGGGTCGCTAAAGAGTCCTC
ACGGCCTTAAAGCGGGCACGGATCGCCTGCTCCGTGTGCTAGGGAAGCCG
GGGGGAAACGTGGCGAATGTCTCCCTCGGAGACGGCACGCACCGTCGAAG
ACCAGGAGGAGTTTACTATGTACGCATTTGCTTGTATAAGGAGAGATGGG
AATAATCAATGCGACGGAACAAGCGCTCCTATCACGAAAAGCACCTCAAT
TGTGAGAGCATGGTTTTGA
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Coding sequence (CDS) from alignment at CM002459.1:259343..260111-

>rna2385 ID=rna2385|Name=rna2385|organism=Nannochloropsis gaditana|type=CDS|length=1764bp|location=Sequence derived from alignment at CM002459.1:259343..260111- (Nannochloropsis gaditana)
GGAAGCCGGGGGGAAACGTGGCGAATGTCTCCCTCGGAGACGGCACGCAC
CGTCGAAGACCAGGAGGAGTTTACTATGTACGCATTTGCTTGTATAAGGA
GAGATGGGAATAATCAATGCGACGGAACAAGCGCTCCTATCACGAAAAGC
ACCTCAATTGTGAGAGCATGGTTTTGACATCACGGAGTCTTACTCGAAAG
TCGTTGACCGATACGCCGGGTGGTCGCACGTCGTGATGCTCCAAAGGAAC
TCCTCGTTCGAAGTGCGCGTGAATGTGGCGGGGCTGTTGGGGGGGTGTTG
TCCAGTAGGGGCGGCGCCCCGCGTGGGGAAGGTGTTGAAAGAGGCGCTAG
GGACAGAAACGCATGTCTTAGCTTCCGCCAGCCTCCTGAACGCCCTCATG
GACCTATTTGGCAGGGACGAGCTGGATGCCGTGTTCCAAGAGCTGAAGAT
GTTGCCCATGCTGACGAAAGTGTTGCCGGCATTCCGCCTCAAGGCCAAGA
CGGAGGCGGGGAAGCATGGACGCGATGCGGTCGGTCACGTGAAAGAAACG
GCTTTGAATCTAGCGCGCTTCATCAAGTATAAACAGAGGGAAGCCGGGGG
GAAACGTGGCGAATGTCTCCCTCGGAGACGGCACGCACCGTCGAAGACCA
GGAGGAGTTTACTATGTACGCATTTGCTTGTATAAGGAGAGATGGGAATA
ATCAATGCGACGGAACAAGCGCTCCTATCACGAAAAGCACCTCAATTGTG
AGAGCATGGTTTTGACATCACGGAGTCTTACTCGAAAGTCGTTGACCGAT
ACGCCGGGTGGTCGCACGTCGTGATGCTCCAAAGGAACTCCTCGTTCGAA
GTGCGCGTGAATGTGGCGGGGCTGTTGGGGGGGTGTTGTCCAGTAGGGGC
GGCGCCCCGCGTGGGGAAGGTGTTGAAAGAGGCGCTAGGGACAGAAACGC
ATGTCTTAGCTTCCGCCAGCCTCCTGAACGCCCTCATGGACCTATTTGGC
AGGGACGAGCTGGATGCCGTGTTCCAAGAGCTGAAGATGTTGCCCATGCT
GACGAAAGTGTTGCCGGCATTCCGCCTCAAGGCCAAGACGGAGGCGGGGA
AGCATGGACGCGATGCGGTCGGTCACGTGAAAGAAACGGCTTTGAATCTA
GCGCGCTTCATCAAGTATAAACAGAGGGAAGCCGGGGGGAAACGTGGCGA
ATGTCTCCCTCGGAGACGGCACGCACCGTCGAAGACCAGGAGGAGTTTAC
TATGTACGCATTTGCTTGTATAAGGAGAGATGGGAATAATCAATGCGACG
GAACAAGCGCTCCTATCACGAAAAGCACCTCAATTGTGAGAGCATGGTTT
TGACATCACGGAGTCTTACTCGAAAGTCGTTGACCGATACGCCGGGTGGT
CGCACGTCGTGATGCTCCAAAGGAACTCCTCGTTCGAAGTGCGCGTGAAT
GTGGCGGGGCTGTTGGGGGGGTGTTGTCCAGTAGGGGCGGCGCCCCGCGT
GGGGAAGGTGTTGAAAGAGGCGCTAGGGACAGAAACGCATGTCTTAGCTT
CCGCCAGCCTCCTGAACGCCCTCATGGACCTATTTGGCAGGGACGAGCTG
GATGCCGTGTTCCAAGAGCTGAAGATGTTGCCCATGCTGACGAAAGTGTT
GCCGGCATTCCGCCTCAAGGCCAAGACGGAGGCGGGGAAGCATGGACGCG
ATGCGGTCGGTCACGTGAAAGAAACGGCTTTGAATCTAGCGCGCTTCATC
AAGTATAAACAGAG
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Synonyms
Publications