EWM28278.1, cds2377 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|585110623|gb|EWM28278.1| (hypothetical protein Naga_100004g16 [Nannochloropsis gaditana]) HSP 1 Score: 407.142 bits (1045), Expect = 6.854e-144 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 Query: 1 MLQRNSSFEVRVNVAGLLGGCCPVGAAPRVGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQSITESYSKVVDRYAGWSHVVGSRGETWRMSPSETARTVEDQEEFTMYAFACIRRDGNNQCDGTSAPITKSTSIVRAWF 195 MLQRNSSFEVRVNVAGLLGGCCPVGAAPRVGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQSITESYSKVVDRYAGWSHVVGSRGETWRMSPSETARTVEDQEEFTMYAFACIRRDGNNQCDGTSAPITKSTSIVRAWF Sbjct: 1 MLQRNSSFEVRVNVAGLLGGCCPVGAAPRVGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQSITESYSKVVDRYAGWSHVVGSRGETWRMSPSETARTVEDQEEFTMYAFACIRRDGNNQCDGTSAPITKSTSIVRAWF 195
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|553182201|ref|XP_005853697.1| (armadillo repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|422295369|gb|EKU22668.1| armadillo repeat-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 132.109 bits (331), Expect = 5.156e-37 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 Query: 55 MDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 MDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ Sbjct: 1 MDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 63
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|298704868|emb|CBJ28385.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.2554 bits (186), Expect = 8.838e-13 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 30 VGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQS 118 +G+ L +A+ + HVL A LNA+MD++G D LDA F+ L +PAFR K K E GRDA+ H+KETALN RF+KYKQ+ Sbjct: 714 LGRALVQAM-EDPHVLVQAEALNAVMDVYGDDGLDAAFRASGAPAALAAGVPAFRRKVKQEGKALGRDAMCHLKETALNAGRFVKYKQA 801
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|813219518|ref|XP_012211136.1| (hypothetical protein SPRG_16437, partial [Saprolegnia parasitica CBS 223.65] >gi|641523249|gb|KDO18162.1| hypothetical protein SPRG_16437, partial [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.929 bits (154), Expect = 3.023e-10 Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = 0 Query: 40 TETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQS 118 ++T + +LNAL D++ ++ D VF L L L V + K K EA RD VGH KET LNL RFIKYK+ Sbjct: 2 SDTDLQVVCEVLNALFDIYSDEQYDEVFFRLNFLASLEHVSAGMKAKIKAEAKTLDRDLVGHAKETRLNLLRFIKYKKQ 80
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|813178536|ref|XP_012205737.1| (hypothetical protein SPRG_10784 [Saprolegnia parasitica CBS 223.65] >gi|641529413|gb|KDO23589.1| hypothetical protein SPRG_10784 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 68.1662 bits (165), Expect = 5.324e-10 Identity = 46/118 (38.98%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 6 SSFEVRVNVAGLLGGCCPVGAAPRV---GKVLKEALGT---ETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 +S E R +LG +G P +VL + LGT +T + +LNAL D++ ++ D VF L L L V + K K EA RD VGH KET LNL RFIKYK+ Sbjct: 525 ASIEARTAAIRVLG---TLGKKPHSLAENQVLGQCLGTLLSDTDLQVVCEVLNALFDIYSDEQYDEVFFRLNFLASLEHVSAGMKAKIKAEAKTLDRDLVGHAKETRLNLLRFIKYKK 639
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|695376667|ref|XP_009515834.1| (hypothetical protein PHYSODRAFT_552294 [Phytophthora sojae] >gi|348688745|gb|EGZ28559.1| hypothetical protein PHYSODRAFT_552294 [Phytophthora sojae]) HSP 1 Score: 66.2402 bits (160), Expect = 6.984e-10 Identity = 41/113 (36.28%), Postives = 56/113 (49.56%), Query Frame = 0 Query: 9 EVRVNVAGLLGG----CCPVGAAPRVGKVLKEALGTETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 E R+N G++G C VG+ L L ++ + A LNA+ D++ +E D F L L L + A + K K E + R V HVKET LNL RFIKYK+ Sbjct: 107 ESRLNAIGMIGCVGKRCSSAAEKEAVGRALVSRLD-DSSLEVVAETLNAIFDVYDDEEFDNTFCALNFLSALERTSSALKAKLKAEQKQLDRALVAHVKETRLNLLRFIKYKK 218
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|1173953004|gb|OQS00575.1| (HEAT repeat containing 3 [Thraustotheca clavata]) HSP 1 Score: 67.0106 bits (162), Expect = 1.145e-9 Identity = 45/119 (37.82%), Postives = 59/119 (49.58%), Query Frame = 0 Query: 5 NSSFEVRVNVAGLLGGCCPVGAAPRV---GKVLKEALG---TETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 N+S E R +LG +G P KVL +G +T + +LNAL D++ + D VF EL L L V + K K+EA RD + H KET LNL RFIKYK+ Sbjct: 534 NASVEARTGAIRVLGS---LGQKPHSLGENKVLGTCMGQLLADTDLQVVCEVLNALFDIYSDETYDQVFFELNFLATLEHVGAGMKAKIKSEAKSLDRDLIAHSKETRLNLLRFIKYKK 649
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|698797436|ref|XP_009831747.1| (hypothetical protein H257_07801 [Aphanomyces astaci] >gi|574113538|gb|ETV79028.1| hypothetical protein H257_07801 [Aphanomyces astaci]) HSP 1 Score: 67.0106 bits (162), Expect = 1.173e-9 Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 3 QRNSSFEVRVNVAGLLGGCCPVGAAPRVGKVLKEALGT---ETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 Q + S E R + LLG + KVL L +T + +LNAL D++ ++ D+VF E+K L L V + K K+EA R+ V H KET LNL RFIKYK+ Sbjct: 546 QASPSVEARTSAVRLLGTLGKKAHSLPENKVLAVCLSAVLRDTDLAVVCEVLNALFDIYADEQYDSVFHEVKFLTSLEHVGAGMKSKIKSEAKSLDRELVAHAKETRLNLLRFIKYKK 663
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|673035768|ref|XP_008871845.1| (hypothetical protein H310_08023 [Aphanomyces invadans] >gi|574472284|gb|ETV99289.1| hypothetical protein H310_08023 [Aphanomyces invadans]) HSP 1 Score: 66.6254 bits (161), Expect = 1.649e-9 Identity = 45/121 (37.19%), Postives = 61/121 (50.41%), Query Frame = 0 Query: 3 QRNSSFEVRVNVAGLLGGCCPVGAAPRV---GKVLKEALGT---ETHVLASASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 Q + S E R L+G +G P KVL L T +T + +LNAL D++ ++ DAVF E+ L L V + K K+EA R+ + H KET LNL RFIKYK+ Sbjct: 540 QASPSVEARSCAVRLIGT---LGKKPHSLPENKVLATCLSTVLRDTDLAVVCEVLNALFDIYSDEQYDAVFHEVNFLTALEHVSAGMKSKIKSEAKSLDRELIAHAKETRLNLLRFIKYKK 657
BLAST of EWM28278.1 vs. NCBI_GenBank
Match: gi|1214713679|gb|OWZ24563.1| (hypothetical protein PHMEG_000387 [Phytophthora megakarya]) HSP 1 Score: 66.6254 bits (161), Expect = 1.781e-9 Identity = 45/121 (37.19%), Postives = 61/121 (50.41%), Query Frame = 0 Query: 7 SFEVRVNVAGLLGGCCPVGAAPRVGKVLKEALGTETHVLAS----------ASLLNALMDLFGRDELDAVFQELKMLPMLTKVLPAFRLKAKTEAGKHGRDAVGHVKETALNLARFIKYKQ 117 S E R+N G++G ++P KEA+G H L S A LNA+ D++ +E D F+ L +L L + A + K K E + R V HVKET LNL RFIKYK+ Sbjct: 539 SAESRLNAIGMIGCVGKRCSSP----AEKEAVG---HALVSRLDDSSLEVVAETLNAIFDVYDDEEFDDTFRALNLLSALERTSSALKAKLKAEQKQLDRALVAHVKETRLNLLRFIKYKK 652 The following BLAST results are available for this feature:
BLAST of EWM28278.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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