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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g7.9177.mrna |
| Orig protein id | gnl|cribi|Naga_100004g7.9177 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:239708..242369 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2377 ID=rna2377|Name=rna2377|organism=Nannochloropsis gaditana|type=mRNA|length=4767bp
ATGCCACAGGCACGGACCGCACTGAGCAAGCTTATACTCCTTAGGGCCAT
GTTCGTCACGATATTAGCAGGCGTGGATGGGGATGGACGTCGCTTTGATA
GGTTCCACTTCCTCCCTCCCCCCCGACGCGCACCAGGCCGGCTTCTTGCT
ATACCTTCTCCACGCACGTCTTTCGTCGCTCTTCCCGCTGCCACGCCGGA
AGATGATAATGCGCCCAAGGTATCTGTTGGTATCAACAGCGGCATTGCTG
CCACAAATTTGATCCCTCCTGCTCCCCCTTCATCCCCTAAAGAGGCCAAG
GCCCTTGTCCGAAGCCCAAGGGAGGGGCGAGCCTCTGTAGGACGCATAAT
ACCGTTCACTCGCGGGGCAATAATGCGGCACAAACAAGCCAGCCCCCGTA
GCAATCCCTCCCGGCCCGCGGAAGATGAAGAGCGTCGAGCTGTGTGCGAC
CTATCGCCCGACCTGCCCACCTTCCACACCGTGATGAAGGTGTACGCAGA
CGAGCGGGACCCTGAGGGGGCGGAGATGGTGCTGGGATGGCTGCTGGCTC
GCGGGCTGTTGCCAGATGTGGTGACGTACACGACGTTGATGCATGCGTAT
GCCGGACGGGGTGACACGGAGGGTGCAGAGGCTGTGTTGCGGAGGATGCT
GGAGGGCGAAGGAGGGAGGGTTAGGGAGGAGGAGGTGCTGCGCGTATTGC
CCAACGTCATGACATACACGACCCTGATGACAGCCTACGCTGCGGGGGGG
GACGTGGAAGGCAGCGAGGCGGTGCTGGAGCGGATGGAGGAGGCGTGCAT
TGCGCCCAACGTGATGACATACACGGTCTTGATGACGGCCTACACCCTCC
GCGGCGACGTGAAAGGGGCCGAGGGCGTGCTCCGGCGCATGCTCTCCGCC
TACGTGGCCCCCAACGCAAACACGTACACCACGCTCCTGCACGCGTACAC
GGTGAACGGGAACGCGGCGGGCGCCGAAGAGGTCTTGGCGCGAATGGAGG
CAGCCGGCGTCCTCCCCACGGCCCTGACCTTCGCCACGCTGATGACAGTC
TATGCGGCCCGCGGAGAGGTGGAGTCCGCGAAGGGGGTCTTGGCCAGGAT
GGAGGCGGCGGGGGTGGGCCCCACGGCCATGGCCTTCGACACGCTCTTGA
ATGCCTACGTCGTGGCGGGGGACGTGGGCGGGGCCGAGCAAGTTTTGCGT
CGGCGGGAAGCGGAAGCATACCCGGATTTCCCCCTGACCTACAACACCTT
GATGAACGGGTACGCAGACAAGGGAGACGTGGCGGGGGCGGAGGGGGTGC
TGGCGCGCATGCGGGCCAAAGGCGTTGGGCCCGATGAGACGACGCTGTCA
ACCTTGCTGCACGCATACGCGGAGGCGGGAGACCCCTTGGGGGCGGAGGC
GGTCCTGCTTCGTGTCCAGGGGAAGGGGGGAGAGAAGTGGGACGGGGGAG
AGTTTGCGGGGCTTTCGCTGACGGTCTTGATGTTTAATACCTTACTGAGT
GCCTACGCGGCGCGCAAGGACGTGAAAGGCGCGGAGCAGGTCTTGGCCAG
GCTGGTGGCGGAAGGGGAACGCGCGGGGGAGGGGGGGAATCTGAAACCGA
ACGCCATTACCTACAATTCGCTCTTGACCGCCTACACGAATGCGGGGGAC
ATGGCGGGGGCGCAGCAGGTGTTGAAACGCATGGTGCAAGCCGGGCTGTC
TCCGGACACTTACACGTTCAACACCCTGATCGCCGCCTTCGTCGCCCGCA
GAGAGGTGCGGGCCGCGGAGAAGATGGTGGCATACATGCAGGAGCACGGG
GTGCTGGCGGACGTGGTCACCTACAGCCAGCTTCTCCAGGGCTACGCGAC
CAAGGAAGGAGACATGGGGAAAGCAGAGGAGGTCCTGGAGCGGATGGCGA
GGGACGGGGTGGCGCCAAACTCGTACACGTACAACTATTTGATCGAAGGC
TACGTGAAAGCGGGGGAGATGGACTGGGCGGAAGACGTCTTGGAGCGGAT
GCGGACGGTGGGGTTGGCCCCTACAAGCATGAATTACTGCGTCTTGATGG
ACGCGTTCACACGCAGGAGGGACGCGAGGGGGGCGGAGAAGATCTTGGAC
CGGATGAAGAAGGAAGGTGTGCAGGCGAATGTCCAGGTCTTCACGACGCT
GATGAACGCCTACGCCAAGCGCGGAGACGTGGAGGGGGCGGAGGGGGTGT
TGGCGCGCATGCTGGCGGTGGCGGAGGAGGAAGGAGGAGGTTCGAAGGAC
TGCGAGCCGAACGTGCACACCTACAGCACGCTCATGAACGTGTATGCCCG
AGCGGGTTTGGCTGTGGGGGCGGAGGGAGTGCTGACACGCATGACGGCGG
CGGGCTGGGCGCCGAACGTGATCACATTCACTACCCTGATGACAGCCTAC
AGCCGGGCCGGGGACCCCGAGGGAGCAGAGCTCGTGTTGAAGCGCATGGA
GGCAGCGGGGGTGTCGCCCAACGTCTTGACGTATAACACCTTGCTGAGCG
CCACGTCGAGGATGGGGTTGAGGGAGGGTGAGGTGGAGGAACGGCGGGCC
AAGCGTGTGCTGCAAGTCTACGATACCATGCGACGGAGCGCGGGGAAGGG
AGGAGGGTTGGAAAAGGCGCCGGATGAAGCCACGTACACGGTGCTTCTGA
CCTGCTTGTTGAGGTTTCCCAAGCGCTTGACCAAAGAAGTCTACAAACTC
ATCCTGGAGGACTGGCGCCGCTTGGTCCCTACCAGGAATCGCTCGGATAG
AAATTATCAGTCATTTATAACCATACTGGCCGCCATGGGGGACTGGGAGG
AAATGGCCACGGTCTTTCGGGAGGCCCAAGCACGGTTTCAAAAGGGGCAG
CTCTCGCCAAGGGAGTATTCTAAGGTGGAGGCGACGTTTCGGTTTCCACG
CTTTCGTGATAATGATTCCTTTTGCCAACGGAGTGGCGTGTGTAGGAAGA
GGAAGGGACCTCCGGTCGAGGTGCTCATGGGCCGCGACGAGGCTTGCAAC
ATGGTGTACAGGGCCCGTATCGACATAAAATGTGCGAGTAGGCAGCAGGA
GGTTTGGCGAGCTGCCTCTAGGAGGTTTCGACACCTGTATGCGTCCATCC
GCAGCTTGTTTTCTGGGTACATTATGATTTTTGGTCCTGTCGGCAGATCG
GTCTCCGCGGTGGCCACCTTTGCGCTGCTCTTTTCTGGAATCGCTTCCTC
GCATTTAGCGCAAGTTTCTACATCAAGTTCCAGCAGCACTATGGAAATGT
CATCTGCCGCTTCGAAACCCCGGTCTATCCTGAATACAAACACGAACATG
CGACATGCTGGGATGTCATCGTCCTCGTGTCGCTTTTTGAAGCGTGTCCG
GGGTGGTGCCGCTTCTCCAAAGGCCTCTAGTATTCCAATCAAAACCACTT
CTCATGTGACAGCAGGCACAACCGAAGCTCACCACGGCTTGAGCGTTACG
TCTCTGGCCATTAACATCATGGCAGATTTGTGCCCGCATGGTATGCTACC
GCTTGCATTTGGGATGGCTTCCGAGGGTGGCACGGGCCTTGTGCCCGCAT
TAAGTTTGCTCGTTCTCTTCGGTTCGCTCTCTGCGTACACGCTCATATCC
ATAGCCCGTGCTTGCGAAGCCACCGGAGAGTACTCCTTTCGCGGAATATG
GTCTCGCACTCTCCACCCTTCCACGGCCTGGATTATTGACGCAGGCATCA
CTTTTCTCTGCTTCGGGTGCTGTATTTTCTACTCCGCCTTCATCGGCGAC
CTCTCCGCAGCCCTCGCCCAGGCCCTGGGGGCTCCCGCCGTCCTGCACAA
GCGGTGGCTGTGCCTTGTCGCACTCCACATCTTCCCCCTCTGGCCTTTGT
GTTTGATGAAAAACCTCTCGGCCTTGCAATACTCCTCCATCGTGGGTGTG
TTTGGGATCCTCTATACCACTGCCTTCGTGGTCAAGCGACAGTGCGACGG
GAGCTACGGCCCCAGTGGGCATTTCCATGCGCTGATTGATGCAGTATACC
GTCCCCAGACCCCTTCGTACTCGGCGTTTGAGAAACTTTTCCGCCTTGGC
CCCGGCGCGATCTCCCTTATGAACATGGCTTGTGTGGCGTTCACTACCCA
CTACAACGGGATTGCCTACTACACCGAGTTGAAAGACAGGAACCTCTCCC
GGTACTCGGGGGCAGTCGGCCTGGGCTTCCTCGCCTCCTTCTCTGTTTTC
GCCCTCATGATGGTCTTCGGCTTCGGCACCTTTGGATTCGCCGCGCAACC
CCTCCTTCTCAACAACTATCACCGCACGCAGGACGCGCTGGCCACAGGGT
CCCGTCTAGCCACGGCCTTTTCTATCATGTGCGGCTTCCCCCTCATGTTC
GCGGGACTCAAGACCGGTTTCTTTTCCCTCTGGCACAGCAACGTTGAGAG
CGCACGCCGTCTGAGTCCCCGCCTCAGGGTAGCATTGAAATCCGACACGG
TCATCGCCACGGTCTCCTCCCTCCTCCTGGCAGCAATCTGTGGCATTGCC
TGCCTGTGCACGGAGGAAGACGTCGGTTTCGTGATCGGCGTGATTGGGGC
GGTGCTGGGCACCAGCGTGGTGTACATCATTCCTGCTCTCCTCAACACGA
AACTACTGGCGCGGGTCAAGGACACGGGGGTAGCCAAGCCCGAAAAACGC
TTCAACCAAGGTCTGATCGTCATTGGCGTGGTATTTGCCCTCTTGGGGAC
ATACATGGCCATCGATGACCAGTTTGGGATATTCAGTGGGAGAGGCCCCA
AAGTCCACATGCATTGA back to topprotein sequence of rna2377 >rna2377-protein ID=rna2377-protein|Name=rna2377|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MVNIFRFVILFILQLPAFVQGFVIPRSWVPSCKARESTVLMTATTQHVVV
GKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKT
PEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTD
LNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAF
MLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRL
CAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV
GAL back to topmRNA from alignment at CM002459.1:239708..242369+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2377 ID=rna2377|Name=rna2377|organism=Nannochloropsis gaditana|type=mRNA|length=2662bp|location=Sequence derived from alignment at CM002459.1:239708..242369+ (Nannochloropsis gaditana)
TTAGGGGTATCTCCGCCCCCGGTGGACGACTTACTAGTGCAAGCTCTGGC
GGAAGTAGGGGGAATGGGCATGGGGGGAAGCGCCGGGGAAGTATTCGGGC
GCCAAGGGCTCacggaggtcgaggaggaggaggacatggccctGCTGTTC
GCCGAGTTCGACgagcacgaggaggacgggcacaGGCGTCACCTTCTGGA
GGAGACGTCCTCACCTCGTGGCTGGAGGGATGGCAGCGAGGATCTTGGGG
GAAAGAACGACGATGGGGAGATGGCCGAGGATGCTGGGCGAGCAGCTGGA
GAGAGActgggtggaaaaggagatcCGGTATACGAGTTGATGGAGGCGTC
GCCGGCGATGCGTCCCAAAGTGACCAGCCCCAGCATGGAAAGGGACGAGG
ATAGGATGGATGTGGTCGGCGACGAGCGACAGGCACTGGTGGGTGCAGAT
GGAGGAGTTTCACAGGATTATTAGGAAGATAAGCGGTCTGGATGAGGCGC
CTTGACCGCCGAGATGAACAGCTGATGTCTAATCAGAGGACCATGAGGAC
AATGCAATGTGGTAGTTATACGCAAAACATAAAAGTATCAGCCGATTTCC
CGGCACGGACACTTCAGCTAGGTTTTCCGTCGATATAATCATTTCCATCA
AATCAAGCATTCATGACGATAAACATCGGCGCTTCCCTTTTGCTTCTTTT
CATACACGTGGGCTCATACTTTGTGGGAGCTGCAGCAAGGTGAAGAAAAT
CCCTGTACTGACGTGCTCACAGATAAAGCAAGTCACAGGCAACCTAACAT
ATCTCATATATTTGAGGTGCACGGAGTATATTTCGGTTCAAATCTCTCGT
CTGTCCTTACAACAAGGCGTCAgccctgtcccccccccccagtaAGTGAG
GCATCATCCGCTTCCCGTGCAAGCGAGTATAGAATTATTTCCAGACGTCC
TGAGCACGCATTTGCCAACGCTTTTACTTCTCTTTGACCTATCCCTTGAT
GGTCTTTTGGATCGACTATATTCCGACTTGCATATTTGACATAGCATGGG
TATTCTTTGTGTCAACCTCCCGAATGAAAAGAATTCGAGGCCAGTGGAAA
AAATGTGTGTCCATTGTTGTCCATCATCAAGAGCATGTGGTGTGATCCTT
TAGTTCGCAGTAAACGATTTGTTCATGCACTCTCAGAAAGGCGGGCTCCG
cattaacctcctccctcaggaaATATGCTAGAAAATAAACGTTCCTCACG
AGAAGACTCCCTCTCAATATCAGATTTTTTGCCCGAAGTTGCGCAATGCT
TTAAAAGGAGCCCTCACGTTATTTCGGAAAGCTTGCTTTTTCGGAGGATG
GACTGACTAAAATCACACCGCCTTACATACAGGTATTCTCACTGCGTCGT
GACTCTTCGAAAGAATGGTTAACATCTTTCGATTTGTCATCCTTTTTATC
CTGCAGCTTCCGGCATTTGTACAAGGTTTTGTCATTCCAAGGTCCTGGGT
ACCCTCTTGCAAGGCTCGAGAGTCTACTGTTCTCATGACAGCGACGACAC
AACACGTTGTCGTTGGGAAAGGGCGAGTTGGGGAGGCTCTTGGAAAAATG
CTGGGGTCCAGCACTGTTATGGTTGGGCGCAATGACCCTGTTCCTATCGA
AGGGACAGGTCCGATTTATGTGGCTACGCGTAACGATGACCTCGCGGCCG
TTGTTGAGAAAACCCCTGAGGCCCGTCGGAAAGACTTGGTTTTTCTACAG
AACGGGATGCTAGGTCCTTTTTTGAAAACGTATGGCCTCGAGGACAACAC
TCAAGCGCTCGTGTATTTTGCTGTAGCCAGGAAAGGGGACGTGCCTACTG
ATGGTGTGACCGATTTGAACCCGAACGGTTTGACCGCTGTGTACGGGGAA
TGGGCAACAGACTTTGAGGAGACGCTTACGAAGGCGGGGTTGAAATGCCA
CATATTGGATAAGGGGCGCTTTCAAGCCGCCATGTTTGAAAAGCTCATGT
GGATCTCGGCATTCATGCTGGTAGGGAGTGTGCACGGAGGGATCACagtg
ggcgaggtggagaagtCGCACCGGGAAGACGTGGTGGCACTGATCCAAGA
GCTGAAAAAAGCCTTGGAACGACACGCGAAGGTGACGTTTCAAGACGGGG
TGGAAGACCGATTGTGTGCCTATGCGCGGTCCGTTGCCCATTTCCCGACG
GCGGTGAAGGAATTCCCATGGCGCAATGGTTTCTTTTGGAAGCTATCCGA
GGAAGCTGTTGGACGCGGAGAGGCTGATCCCTGTCCATCCCACTCGGCGA
TGCTTAAGCAGGTTGGAGCCCTTTAACAGTACGTACAACCGGAAAAGCAT
GAACAATAACATGTACAATGTAAGTTTAATTTGCTTTTTATTGTGCCACG
TGTTCTCGTCAATGACGGGTAAATTTTAAAACACGGGCTCCTCCTATGTA
CAGCGGCGGAAAAGCAAGGACACATTGACCCCGCCGAAGCCAAAGGAATT
AGAGAGGGCGTACTCCATGTCGGGCCGCAGAAGATGGGGGCTCTGTGGGC
TCTGTCCGACGATTTGGAAGTCCCAGGCTTTGGCGACGCTGTCAGGCCTG
CATGGTCAAGGGGGGAGCAGCCAAGCAATGGTGTAAAAAAAAACGGCACC
CTGGCGTCTTGA back to topCoding sequence (CDS) from alignment at CM002459.1:239708..242369+ >rna2377 ID=rna2377|Name=rna2377|organism=Nannochloropsis gaditana|type=CDS|length=912bp|location=Sequence derived from alignment at CM002459.1:239708..242369+ (Nannochloropsis gaditana)
ATGGTTAACATCTTTCGATTTGTCATCCTTTTTATCCTGCAGCTTCCGGC
ATTTGTACAAGGTTTTGTCATTCCAAGGTCCTGGGTACCCTCTTGCAAGG
CTCGAGAGTCTACTGTTCTCATGACAGCGACGACACAACACGTTGTCGTT
GGGAAAGGGCGAGTTGGGGAGGCTCTTGGAAAAATGCTGGGGTCCAGCAC
TGTTATGGTTGGGCGCAATGACCCTGTTCCTATCGAAGGGACAGGTCCGA
TTTATGTGGCTACGCGTAACGATGACCTCGCGGCCGTTGTTGAGAAAACC
CCTGAGGCCCGTCGGAAAGACTTGGTTTTTCTACAGAACGGGATGCTAGG
TCCTTTTTTGAAAACGTATGGCCTCGAGGACAACACTCAAGCGCTCGTGT
ATTTTGCTGTAGCCAGGAAAGGGGACGTGCCTACTGATGGTGTGACCGAT
TTGAACCCGAACGGTTTGACCGCTGTGTACGGGGAATGGGCAACAGACTT
TGAGGAGACGCTTACGAAGGCGGGGTTGAAATGCCACATATTGGATAAGG
GGCGCTTTCAAGCCGCCATGTTTGAAAAGCTCATGTGGATCTCGGCATTC
ATGCTGGTAGGGAGTGTGCACGGAGGGATCACagtgggcgaggtggagaa
gtCGCACCGGGAAGACGTGGTGGCACTGATCCAAGAGCTGAAAAAAGCCT
TGGAACGACACGCGAAGGTGACGTTTCAAGACGGGGTGGAAGACCGATTG
TGTGCCTATGCGCGGTCCGTTGCCCATTTCCCGACGGCGGTGAAGGAATT
CCCATGGCGCAATGGTTTCTTTTGGAAGCTATCCGAGGAAGCTGTTGGAC
GCGGAGAGGCTGATCCCTGTCCATCCCACTCGGCGATGCTTAAGCAGGTT
GGAGCCCTTTAA back to top
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