EWM28246.1, cds2369 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|585110591|gb|EWM28246.1| (hypothetical protein Naga_100004g7 [Nannochloropsis gaditana]) HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0 Query: 1 MVNIFRFVILFILQLPAFVQGFVIPRSWVPSCKARESTVLMTATTQHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGAL 303 MVNIFRFVILFILQLPAFVQGFVIPRSWVPSCKARESTVLMTATTQHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGAL Sbjct: 1 MVNIFRFVILFILQLPAFVQGFVIPRSWVPSCKARESTVLMTATTQHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGAL 303
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|873227115|emb|CEM19467.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 332.798 bits (852), Expect = 1.587e-111 Identity = 154/258 (59.69%), Postives = 204/258 (79.07%), Query Frame = 0 Query: 46 QHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGAL 303 + V+VG+GR+G L ++ G S V+VGR+DP+P + GPIYV TRND LA++++KTP +RR+DLVFLQNGML PFL++Y L+DNT L+YFAVA+ G+ P DG TD+NP GLTAV G+WA DF L L C +L+K F+A+M+EKL+WI+AFMLVG+ + G+TVGEVE+SHR++V LI ELK+A E +TFQDG+ +RLC+Y RSV+HFPTAVKEF WRNGFFW LS++A+ G ADPCP H+ +L+QVGA+ Sbjct: 5 RDVIVGRGRIGSLLYELGGRSGVLVGRDDPIPADVEGPIYVCTRNDALASIIDKTPASRREDLVFLQNGMLEPFLQSYALQDNTMGLIYFAVAKLGEPPIDGKTDVNPEGLTAVNGKWANDFAALLRNGQLSCKVLEKAVFRASMYEKLIWIAAFMLVGTKY-GVTVGEVEQSHRQEVTELIGELKRASE-GLGITFQDGMVERLCSYTRSVSHFPTAVKEFEWRNGFFWDLSKQAMDGGRADPCPIHTRLLQQVGAV 260
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|299116682|emb|CBN74827.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 308.916 bits (790), Expect = 1.704e-101 Identity = 146/266 (54.89%), Postives = 191/266 (71.80%), Query Frame = 0 Query: 35 RESTVLMTATTQHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300 R+ + TATT +VG GR+G AL M G +VGR D +P +G GPIYV TRNDDL V+ +TP ARR+DLVFLQNG+LGP L+ +GL NTQAL+YFAV++KG+ P DG+TD NP GLT+ G+WA + +E L K GL CH L + R+ A M+EK +WI AFM+ G+ H +G+V+ H ++V LI EL+KA+E V F+DGV+DRLCAY+RSVA++P AVKEF WRNGFFW +SE+A G DPCP H+ +L+QV Sbjct: 44 RQRSQRPTATTMAAIVGGGRIGCALYDMGGGGDTLVGRGDIIP-DGDGPIYVCTRNDDLEDVISRTPPARREDLVFLQNGVLGPLLEKHGLAKNTQALIYFAVSKKGEPPIDGITDANPEGLTSTCGKWAGELKERLAKGGLTCHELAEDRYTARMYEKHIWICAFMVAGAAH-KCNMGQVDADHADEVRTLIGELQKAIEVEYGVAFEDGVKDRLCAYSRSVANYPAAVKEFSWRNGFFWDISEKARKEGTEDPCPLHTKLLRQV 307
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|303280695|ref|XP_003059640.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226459476|gb|EEH56772.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 300.827 bits (769), Expect = 7.873e-99 Identity = 151/257 (58.75%), Postives = 180/257 (70.04%), Query Frame = 0 Query: 48 VVVGKGRVGEALGKMLGSSTVMVGRNDPVPIE-GTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGAL 303 +++G GRVG+AL M V+V R D P TGPIYV TRND L VV+ TPEARRKDLVFLQNGML P+L GL NTQALVYFAVA+ + PTDG+TD NP GLTA GEWA F L GL+CH+LD F+A+MFEKL+WI AFM VG+ H G TVG+VE +H+E+V ALI EL E V F +G RL AYAR+V+HFPTAVKEF WRNGFF +SE + G DP P+H+A++KQVGAL Sbjct: 16 IIIGGGRVGQALFDMGVDGDVIVKRGDAFPSSPATGPIYVCTRNDALQGVVDATPEARRKDLVFLQNGMLQPWLDARGLGGNTQALVYFAVAKMNEKPTDGITDANPEGLTAANGEWADAFAARLRSGGLRCHVLDDDAFRASMFEKLIWICAFMGVGAAHPGATVGDVESAHKEEVEALIAELVAGSESAKGVRFAEGTIPRLAAYARAVSHFPTAVKEFEWRNGFFCGISERELAAGRLDPFPTHTALMKQVGAL 272
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|971513035|dbj|GAQ85165.1| (hypothetical protein KFL_002220090 [Klebsormidium nitens]) HSP 1 Score: 302.368 bits (773), Expect = 2.065e-98 Identity = 152/287 (52.96%), Postives = 192/287 (66.90%), Query Frame = 0 Query: 18 FVQGFVI--PRSWVPSCKARESTVLMTATTQHVVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGA 302 FV F+ P V + V A V+VG GRVG+AL KM G V+V R + VP++ TGPI +ATRND L V+E TP RR+DLVF+QNGML P+L + GLE TQ LVYFAVA+ GD P DG TD+NP GLTA G+WA L AGL C +LD F+ +M EKL+WISAFMLVG +G +VG+VE +R++V ALI EL E+ VT +G+E+RLCAYARSVAH+PTAVKEF WRNG+F+ LS++ V +DPCP H+ L++VGA Sbjct: 64 FVPKFLAASPAGQVTPAAGKGRAVTSMAVEPAVIVGYGRVGQALEKMGGEKDVVVKRGEKVPVDSTGPILIATRNDALDRVIEGTPADRREDLVFMQNGMLEPYLASKGLEAATQVLVYFAVAKAGDAPMDGKTDVNPEGLTAATGKWAEAVAARLHSAGLSCKVLDTAAFRKSMLEKLIWISAFMLVGVKNGNASVGDVEAKYRDEVAALIAELAAVAEKETGVTLDEGLEERLCAYARSVAHYPTAVKEFEWRNGWFFDLSKKTVDATGSDPCPLHTCWLRRVGA 350
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|1063510849|ref|XP_007023535.2| (PREDICTED: uncharacterized protein LOC18595499 isoform X1 [Theobroma cacao]) HSP 1 Score: 300.056 bits (767), Expect = 5.421e-98 Identity = 141/253 (55.73%), Postives = 182/253 (71.94%), Query Frame = 0 Query: 48 VVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300 V+VG GRVG+AL M ++V R +PVP++ GPI V TRNDDL +V+E TP++R DLVF QNGML P+L++ GL D Q L YFAV++ G+ P DG TD NP GLTA YG+WA+ L GL C +LDK FQ M EKL+WISAFMLVG+ H G TVG+VEK +R +V +LI EL A +TF++ +EDRLCAY+R+VAHFPTAVKEF WRNG+F+ +SE+A+ G+ DPCP H+A LK++ Sbjct: 56 VIVGGGRVGKALQDMGKGDDLLVKRGEPVPLDFEGPILVCTRNDDLESVLEATPKSRWDDLVFFQNGMLEPWLQSKGLNDADQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWASAIATRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGAHHPGATVGDVEKEYRSEVSSLIAELASAAAGEKGITFEEAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSISEKAIAEGKPDPCPLHTAWLKEL 308
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|1026766077|gb|OAE26673.1| (hypothetical protein AXG93_4118s1020 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 298.13 bits (762), Expect = 7.987e-98 Identity = 141/269 (52.42%), Postives = 182/269 (67.66%), Query Frame = 0 Query: 48 VVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDL-------------VFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQVGAL 303 V+VG GRVG AL KM G + V+V R +P+P +G GPI + TRND LA +++ TP +RR+++ + L NGML PFL++ GL TQ LVYFAVA+ GD P DG TD+NP GLTA G+WA+ L AGL C +LD F+ EKL+WISAFMLVG+ H G T G+VE +RE+VV+LIQEL E F G+E+RLCAYARSV+H+PTAVKEF WRNG+F+ +S+ A+ GE DPCP H+A LK+VG + Sbjct: 8 VIVGAGRVGSALEKMGGGNDVLVKRGEPIPADGQGPIIICTRNDSLAGIIDATPASRREEIGLLFTLVINETFQILLNNGMLEPFLESKGLASATQVLVYFAVAKAGDAPIDGKTDMNPEGLTASTGKWASAVAARLESAGLSCKVLDAEEFKKPQLEKLIWISAFMLVGTRHPGATCGDVESKYREEVVSLIQELAAVAESVKNTKFDSGIEERLCAYARSVSHYPTAVKEFEWRNGWFYDISQRALSNGETDPCPLHTAWLKEVGVV 276
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|1072901414|ref|XP_018470672.1| (PREDICTED: uncharacterized protein LOC108842271 [Raphanus sativus]) HSP 1 Score: 298.901 bits (764), Expect = 1.612e-97 Identity = 139/253 (54.94%), Postives = 182/253 (71.94%), Query Frame = 0 Query: 48 VVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300 V+VG GRVG+AL +M V+V R +PVP++ GPI V TRNDDL AV+E TP++R KDLVF QNGM+ P+ ++ GL D Q L YFAV++ G+ P DG+TD NP GLTA YG+WA+D L GL C +LDK FQ M EKL+WI AFMLVG+ H G +VG VEK +R++V LIQEL A +TF+D + +RLCAY+R+VAHFPTAVKEF WRNG+F+ LS++A+ G+ DPCP H+ L+++ Sbjct: 55 VIVGGGRVGQALQEMGSGDDVLVKRGEPVPVDFEGPILVCTRNDDLDAVLEATPQSRWKDLVFFQNGMMEPWFESKGLGDADQVLAYFAVSKLGEPPVDGITDTNPEGLTAAYGKWASDVAARLQSGGLSCKVLDKESFQKQMLEKLIWICAFMLVGARHPGASVGMVEKEYRDEVARLIQELAAAAAAEKGLTFEDNMVERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSQKAIEEGKPDPCPLHTEWLREL 307
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|1204927855|ref|XP_021297066.1| (uncharacterized protein LOC110426216 isoform X1 [Herrania umbratica]) HSP 1 Score: 298.13 bits (762), Expect = 3.100e-97 Identity = 141/253 (55.73%), Postives = 180/253 (71.15%), Query Frame = 0 Query: 48 VVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300 V+VG GRVG+AL M ++V R +PVP++ GPI V TRNDDL +V+E TP++R DLVF QNGML P+L++ GL D Q L YFAV++ G+ P DG TD NP GLTA YG+WA+ L GL C +LDK FQ M EKL+WISAFMLVG+ H G TVG+VEK R +V +LI EL A +TF++ +EDRLCAY+R+VAHFPTAVKEF WRNG+F+ +SE+A+ G DPCP H+A LK++ Sbjct: 56 VIVGGGRVGKALQDMGKGDDLLVKRGEPVPLDFEGPILVCTRNDDLESVLEATPKSRWNDLVFFQNGMLEPWLQSKGLNDADQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWASAIATRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHHGATVGDVEKEFRPEVSSLIAELASAAAGEKGITFEEAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSISEKAIAEGRPDPCPLHTAWLKEL 308
BLAST of EWM28246.1 vs. NCBI_GenBank
Match: gi|508778901|gb|EOY26157.1| (Uncharacterized protein TCM_027572 isoform 2 [Theobroma cacao]) HSP 1 Score: 297.745 bits (761), Expect = 3.940e-97 Identity = 141/253 (55.73%), Postives = 181/253 (71.54%), Query Frame = 0 Query: 48 VVVGKGRVGEALGKMLGSSTVMVGRNDPVPIEGTGPIYVATRNDDLAAVVEKTPEARRKDLVFLQNGMLGPFLKTYGLEDNTQALVYFAVARKGDVPTDGVTDLNPNGLTAVYGEWATDFEETLTKAGLKCHILDKGRFQAAMFEKLMWISAFMLVGSVHGGITVGEVEKSHREDVVALIQELKKALERHAKVTFQDGVEDRLCAYARSVAHFPTAVKEFPWRNGFFWKLSEEAVGRGEADPCPSHSAMLKQV 300 V+VG GRVG+AL M ++V R +PVP++ GPI V TRNDDL +V+E TP++R DLVF QNGML P+L++ GL D Q L YFAV++ G+ P DG TD NP GLTA YG+WA+ L GL C +LDK FQ M EKL+WISAFMLVG+ H G TVG+VEK +R +V +LI EL A +TF+ +EDRLCAY+R+VAHFPTAVKEF WRNG+F+ +SE+A+ G+ DPCP H+A LK++ Sbjct: 56 VIVGGGRVGKALQDMGKGDDLLVKRGEPVPLDFEGPILVCTRNDDLESVLEATPKSRWDDLVFFQNGMLEPWLQSKGLNDADQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWASAIATRLHAGGLSCKVLDKEAFQKQMLEKLIWISAFMLVGARHPGATVGDVEKEYRSEVSSLIAELASAAAGEKGITFEGAMEDRLCAYSRAVAHFPTAVKEFKWRNGWFYSISEKAIVEGKPDPCPLHTAWLKEL 308 The following BLAST results are available for this feature:
BLAST of EWM28246.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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