rna2365, rna2365 (mRNA) Nannochloropsis gaditana

Overview
Namerna2365
Unique Namerna2365
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1432
Alignment locationCM002459.1:205241..206009 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100348g4.2074.mrna
Orig protein idgnl|cribi|Naga_100348g4.2074
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:205241..206009 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100348g4gene2260Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2365rna2365-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28315.1cds2357Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2365 ID=rna2365|Name=rna2365|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp
ACGCCCAGACCCGGTAATTGCATAGAAATGACAGCATTCCGTCTGCCCTC
CCGCGGCCAGGCACCGCTCACGTTTGCGGTGCAAATCCTCACGAGTCTAC
GTTTGTAAACTTTTGGCAGGCCGTTGCGTAGCGGAAGGAAACGTAGGGCG
GTGTCTTCCCATCCCGTGCGCAGTCACGACTTCTTCCATCGGCACGAAGG
TCAGAGCACCATGAGGAGAACCTCCTCCCACCTCCTCCTCCTTTCTTTGC
TGGTGGCGTGCGTGTTCAACGATGCCTTGGTCATGAAGGGATTTTCTCCC
CAAAAAAATCCCACCAAGGTGTCCATACCCGCCCCCCAGGGCGCAAGAAA
AGAAGGCAAGCAAGCCAGCCTCTGGCAGGCAAACTTGCGACACGTCGCCT
CCGCCGCCTTCGGGGGGGGCGTCTACCTCCTCTCTCCGTCTATCATGCAC
GCGGAAGTCGTCGAAACAGTCAGTAGCACCACCGTCAACACCCGCGCGGC
TGCGTCGGCTCTGTACTCTGCGCCTATGGTGGTAGCCGCTGAGCAGACGG
TATGGGAGAGCACATGTCTGGGCTTTGGGTGTGGGAGTTACAACGGCCCT
GATTACGGCGGAGCACCCAAGTTGGAGACCGGGGAAAAGAACATAGATAT
GCCTTCCTTCTTGAAACTGGTGGAGGAGAAGCGAATCGAAAAAGTGGAAC
TGTTGGAGGGGGGAAATGTGGCATATGCGTACGTAGCGCCAAGGCGTGGG
GACAAGGAGGGCGCGGGCGAGGGGAAGGAAGCAGGGGCGGAGAGGGTTCG
AATCGGGGAAGGTTTCCCCGTCGAAAATGGAAAGACGTGGTCAAGTCCAC
TGTGGATGGTGCGCATTCTGAAGGACAAGCAGATCCCGTACACCTTGGGG
TTCGATTTTAGTGGCTCCGACAAGGTAACTAGGGCCCTATCTGGTTTTGC
GAATTGAGGAGGAAGGGAGGGAGAGGAGGGAGGGAAGGAGGGCAAAAACA
GCAACGACGAGGCAGGTGGTTTGCAAGCCCAGGCAGGAGGAAACGTCGCG
GCCCATGATTATGATGGATCCGGCCCCCTGTAGGTAGCACATTTACGGCG
CGGAACGCGAAGCAGACGTGCTCTGGGGAAAAAGGAAAAAAATAACGGAA
GGAAAGCTGTGCTCGTCCATCGTCCACGGGTTAATGTTTTTCACCCCCTG
TCTAGCTCCACGTCTGACTCGGCATGTGCTTCGCCCGTCCTTCTTCCTAG
GGGGCCTCCACCCGGCGCCTGGATTCCCTCCCCCCCTCAAAACGACGGAC
AGAAGATTTCTGAAAAGCTGACTGGCACGCTCCTTTTGTCCGCGCAATTA
TTCAGAGGCAAGCCTCGAGACAGGCAGGAAGCGAGCATTACTACTATGGC
ACCCGTATACCTGATAATTTACCGTCCTTCCT
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protein sequence of rna2365

>rna2365-protein ID=rna2365-protein|Name=rna2365|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MWSREKGRSAGARKGSSITVEAGYHHRDREMTRHFTPVWVIKEGVGYNHI
GDQYRWKEGGIAQGTQSNKGERENRSPYRLYPLGFRGVTASHQGAEKRQR
GGGYTGAIVVMLASCLSRGLPLNNCADKRSVPVSFSEIFCPSKKDGRSTC
RVRRGARQGVKNINPWTMDEHSFPSVIFFLFPQSTSASRSAP
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mRNA from alignment at CM002459.1:205241..206009-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2365 ID=rna2365|Name=rna2365|organism=Nannochloropsis gaditana|type=mRNA|length=769bp|location=Sequence derived from alignment at CM002459.1:205241..206009- (Nannochloropsis gaditana)
ATGTGGAGTAGGGAGAAGGGAAGGTCTGCGGGAGCAAGAAAGGGGTCGTC
TATCACCGTGGAGGCAGGGTATCACCATAGAGATAGGGAGATGACAAGGC
ATTTTACGCCAGTATGGGTAATCAAGGAGGGGGTGGGATATAATCATATC
GGCGACCAGTATAGATGGAAAGTGGGAGGAAATGAAAGAAATGTAATGGG
GACAAGGAAGGCAGGAGGGAGGGATTGCTCAGGGGACCCAAAGTAACAAG
GGAGAGAGAGAGAATCGATCGCCCTACAGGTTGTACCCGTTGGGGTTTCG
GGGGGTAACGGCGTCCCATCAGGGCGCCGAGAAGAGGCAGAGGGGAGGTG
GGTAGGGCGGAGGGCGTCTGTGCTTGCGGTGACGCACGCAGGGCAAGGTT
ATGGAAAGAAAATGGAAAGGGAGCATAGAAGGAAGGACGGTAAATTATCA
GGTATACGGGTGCCATAGTAGTAATGCTCGCTTCCTGCCTGTCTCGAGGC
TTGCCTCTGAATAATTGCGCGGACAAAAGGAGCGTGCCAGTCAGCTTTTC
AGAAATCTTCTGTCCGTCGTTTTGAGGGGGGGAGGGAATCCAGGCGCCGG
GTGGAGGCCCCCTAGGAAGAAGGACGGGCGAAGCACATGCCGAGTCAGAC
GTGGAGCTAGACAGGGGGTGAAAAACATTAACCCGTGGACGATGGACGAG
CACAGCTTTCCTTCCGTTATTTTTTTCCTTTTTCCCCAGAGCACGTCTGC
TTCGCGTTCCGCGCCGTAA
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Coding sequence (CDS) from alignment at CM002459.1:205241..206009-

>rna2365 ID=rna2365|Name=rna2365|organism=Nannochloropsis gaditana|type=CDS|length=2316bp|location=Sequence derived from alignment at CM002459.1:205241..206009- (Nannochloropsis gaditana)
GAAGAAGGACGGGCGAAGCACATGCCGAGTCAGACGTGGAGCTAGACAGG
GGGTGAAAAACATTAACCCGTGGACGATGGACGAGCACAGCTTTCCTTCC
GTTATTTTTTTCCTTTTTCCCCAGAGCACGTCTGCTTCGCGTTCCGCGCC
GTAAGTATACGGGTGCCATAGTAGTAATGCTCGCTTCCTGCCTGTCTCGA
GGCTTGCCTCTGAATAATTGCGCGGACAAAAGGAGCGTGCCAGTCAGCTT
TTCAGAAATCTTCTGTCCGTCGAGGGAGGGATTGCTCAGGGGACCCAAAG
TAACAAGGGAGAGAGAGAGAATCGATCGCCCTACAGGTTGTACCCGTTGG
GGTTTCGGGGGGTAACGGCGTCCCATCAGGGCGCCGAGAAGAGGCAGAGG
GGAGGTGGATGTGGAGTAGGGAGAAGGGAAGGTCTGCGGGAGCAAGAAAG
GGGTCGTCTATCACCGTGGAGGCAGGGTATCACCATAGAGATAGGGAGAT
GACAAGGCATTTTACGCCAGTATGGGTAATCAAGGAGGGGGTGGGATATA
ATCATATCGGCGACCAGTATAGATGGAAAGAAGAAGGACGGGCGAAGCAC
ATGCCGAGTCAGACGTGGAGCTAGACAGGGGGTGAAAAACATTAACCCGT
GGACGATGGACGAGCACAGCTTTCCTTCCGTTATTTTTTTCCTTTTTCCC
CAGAGCACGTCTGCTTCGCGTTCCGCGCCGTAAGTATACGGGTGCCATAG
TAGTAATGCTCGCTTCCTGCCTGTCTCGAGGCTTGCCTCTGAATAATTGC
GCGGACAAAAGGAGCGTGCCAGTCAGCTTTTCAGAAATCTTCTGTCCGTC
GAGGGAGGGATTGCTCAGGGGACCCAAAGTAACAAGGGAGAGAGAGAGAA
TCGATCGCCCTACAGGTTGTACCCGTTGGGGTTTCGGGGGGTAACGGCGT
CCCATCAGGGCGCCGAGAAGAGGCAGAGGGGAGGTGGATGTGGAGTAGGG
AGAAGGGAAGGTCTGCGGGAGCAAGAAAGGGGTCGTCTATCACCGTGGAG
GCAGGGTATCACCATAGAGATAGGGAGATGACAAGGCATTTTACGCCAGT
ATGGGTAATCAAGGAGGGGGTGGGATATAATCATATCGGCGACCAGTATA
GATGGAAAGAAGAAGGACGGGCGAAGCACATGCCGAGTCAGACGTGGAGC
TAGACAGGGGGTGAAAAACATTAACCCGTGGACGATGGACGAGCACAGCT
TTCCTTCCGTTATTTTTTTCCTTTTTCCCCAGAGCACGTCTGCTTCGCGT
TCCGCGCCGTAAGTATACGGGTGCCATAGTAGTAATGCTCGCTTCCTGCC
TGTCTCGAGGCTTGCCTCTGAATAATTGCGCGGACAAAAGGAGCGTGCCA
GTCAGCTTTTCAGAAATCTTCTGTCCGTCGAGGGAGGGATTGCTCAGGGG
ACCCAAAGTAACAAGGGAGAGAGAGAGAATCGATCGCCCTACAGGTTGTA
CCCGTTGGGGTTTCGGGGGGTAACGGCGTCCCATCAGGGCGCCGAGAAGA
GGCAGAGGGGAGGTGGATGTGGAGTAGGGAGAAGGGAAGGTCTGCGGGAG
CAAGAAAGGGGTCGTCTATCACCGTGGAGGCAGGGTATCACCATAGAGAT
AGGGAGATGACAAGGCATTTTACGCCAGTATGGGTAATCAAGGAGGGGGT
GGGATATAATCATATCGGCGACCAGTATAGATGGAAAGAAGAAGGACGGG
CGAAGCACATGCCGAGTCAGACGTGGAGCTAGACAGGGGGTGAAAAACAT
TAACCCGTGGACGATGGACGAGCACAGCTTTCCTTCCGTTATTTTTTTCC
TTTTTCCCCAGAGCACGTCTGCTTCGCGTTCCGCGCCGTAAGTATACGGG
TGCCATAGTAGTAATGCTCGCTTCCTGCCTGTCTCGAGGCTTGCCTCTGA
ATAATTGCGCGGACAAAAGGAGCGTGCCAGTCAGCTTTTCAGAAATCTTC
TGTCCGTCGAGGGAGGGATTGCTCAGGGGACCCAAAGTAACAAGGGAGAG
AGAGAGAATCGATCGCCCTACAGGTTGTACCCGTTGGGGTTTCGGGGGGT
AACGGCGTCCCATCAGGGCGCCGAGAAGAGGCAGAGGGGAGGTGGATGTG
GAGTAGGGAGAAGGGAAGGTCTGCGGGAGCAAGAAAGGGGTCGTCTATCA
CCGTGGAGGCAGGGTATCACCATAGAGATAGGGAGATGACAAGGCATTTT
ACGCCAGTATGGGTAATCAAGGAGGGGGTGGGATATAATCATATCGGCGA
CCAGTATAGATGGAAA
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Synonyms
Publications