EWM28357.1, cds2315 (CDS) Nannochloropsis gaditana

Overview
NameEWM28357.1
Unique Namecds2315
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:112672..112754 -
Alignment locationCM002459.1:112325..112584 -
Alignment locationCM002459.1:112208..112261 -
Alignment locationCM002459.1:111981..112159 -

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Properties
Property NameValue
Protein idEWM28357.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100368g6.3794.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:112672..112754 -
CM002459.1supercontigCM002459.1:112325..112584 -
CM002459.1supercontigCM002459.1:112208..112261 -
CM002459.1supercontigCM002459.1:111981..112159 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28357.1 vs. NCBI_GenBank
Match: gi|585110717|gb|EWM28357.1| (hypothetical protein Naga_100368g6 [Nannochloropsis gaditana])

HSP 1 Score: 393.275 bits (1009), Expect = 1.799e-138
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 
Query:    1 MSPSFPHDPLPLVVHGSPPLVLRRRSQRAEVKILSFCSEASKAVYTRVLDDMMMQFYGRSAPSEEGQFPQEVERTIWKTKNRSRRKEHDCTAHPHRRGMPEPLPRSQGQEYEQLTCVLTRLRSAVERVGGQTTPLLILGEGNIFLLFLRAAGVRRQWCRREDGVFSSRERSRGEILKARGMTDEDQICSDV 191
            MSPSFPHDPLPLVVHGSPPLVLRRRSQRAEVKILSFCSEASKAVYTRVLDDMMMQFYGRSAPSEEGQFPQEVERTIWKTKNRSRRKEHDCTAHPHRRGMPEPLPRSQGQEYEQLTCVLTRLRSAVERVGGQTTPLLILGEGNIFLLFLRAAGVRRQWCRREDGVFSSRERSRGEILKARGMTDEDQICSDV
Sbjct:    1 MSPSFPHDPLPLVVHGSPPLVLRRRSQRAEVKILSFCSEASKAVYTRVLDDMMMQFYGRSAPSEEGQFPQEVERTIWKTKNRSRRKEHDCTAHPHRRGMPEPLPRSQGQEYEQLTCVLTRLRSAVERVGGQTTPLLILGEGNIFLLFLRAAGVRRQWCRREDGVFSSRERSRGEILKARGMTDEDQICSDV 191
The following BLAST results are available for this feature:
BLAST of EWM28357.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110717|gb|EWM28357.1|1.799e-138100.00hypothetical protein Naga_100368g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2323rna2323Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications