EWM28361.1, cds2313 (CDS) Nannochloropsis gaditana

Overview
NameEWM28361.1
Unique Namecds2313
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:109304..109924 -

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Properties
Property NameValue
Protein idEWM28361.1
ProductHistone H4 acetyltransferase, NuA4 complex, Eaf6
Orig transcript idgnl|cribi|Naga_100368g8.3798.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:109304..109924 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR015418Hist_AcTrfase_NuA4_cplx
Homology
BLAST of EWM28361.1 vs. NCBI_GenBank
Match: gi|553191005|ref|XP_005855308.1| (myst esa1-associated factor 6-like protein [Nannochloropsis gaditana CCMP526] >gi|422293750|gb|EKU21050.1| myst esa1-associated factor 6-like protein [Nannochloropsis gaditana CCMP526] >gi|585110721|gb|EWM28361.1| Histone H4 acetyltransferase, NuA4 complex, Eaf6 [Nannochloropsis gaditana])

HSP 1 Score: 421.779 bits (1083), Expect = 2.292e-149
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query:    1 MSSGVSLPDKVPTPAVHAGHSTSFPLPTLPASASPASTSALPPLPPGLSNKGLSPEMEEILREQARVEQLLGQVEAEIAKREDDYFERTAHGNIVRGWEGVLDNKPPPKRRYEGRERVFTWSSYTYWSRHGAGAQLQKQTSDASLDGSKGFADGEEGVKRNRVSVVMPSPRDPKVMAARRRKKRQQQRRNHAGMGESSEDDEEMFM 206
            MSSGVSLPDKVPTPAVHAGHSTSFPLPTLPASASPASTSALPPLPPGLSNKGLSPEMEEILREQARVEQLLGQVEAEIAKREDDYFERTAHGNIVRGWEGVLDNKPPPKRRYEGRERVFTWSSYTYWSRHGAGAQLQKQTSDASLDGSKGFADGEEGVKRNRVSVVMPSPRDPKVMAARRRKKRQQQRRNHAGMGESSEDDEEMFM
Sbjct:    1 MSSGVSLPDKVPTPAVHAGHSTSFPLPTLPASASPASTSALPPLPPGLSNKGLSPEMEEILREQARVEQLLGQVEAEIAKREDDYFERTAHGNIVRGWEGVLDNKPPPKRRYEGRERVFTWSSYTYWSRHGAGAQLQKQTSDASLDGSKGFADGEEGVKRNRVSVVMPSPRDPKVMAARRRKKRQQQRRNHAGMGESSEDDEEMFM 206          
BLAST of EWM28361.1 vs. NCBI_GenBank
Match: gi|1112956841|gb|OJT10394.1| (Chromatin modification-related protein EAF6 [Trametes pubescens])

HSP 1 Score: 59.3066 bits (142), Expect = 1.983e-7
Identity = 47/152 (30.92%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   56 EMEEILREQARVEQLLGQVEAEIAKREDDYFERTAH---GNIVRGWEGVLDNKPPPKRRYEGRE--RVFTWSSYTYWSRHGAGAQLQKQTSDASLDGSKGFADGEEGVKRNRVS-------VVMPSPRDPKVMAARRRKK---RQQQRRNHA 192
            E+ + L ++  +++ L Q+E +I   E  Y   TA    GNI+ G++G   N+P  +R+YE  E  R+F+ SS TY           K++ + S +G +  A G++   ++R+S       +V P+PR P+V+ A ++KK   R+ QR+  A
Sbjct:   20 ELLQALAKKRNLDKQLAQIEVQIYNLEGSYLTETAAHSGGNIIHGFDGYFKNQPSGRRKYEISEQDRIFSTSSMTY-----------KKSLELSGEGEESTATGDD---QSRMSTPGLTTVIVPPAPR-PEVLTAAQQKKNRDREYQRKKRA 156          
The following BLAST results are available for this feature:
BLAST of EWM28361.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|553191005|ref|XP_005855308.1|2.292e-149100.00myst esa1-associated factor 6-like protein [Nannoc... [more]
gi|1112956841|gb|OJT10394.1|1.983e-730.92Chromatin modification-related protein EAF6 [Trame... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2321rna2321Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications