rna2321, rna2321 (mRNA) Nannochloropsis gaditana

Overview
Namerna2321
Unique Namerna2321
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length213
Alignment locationCM002459.1:109192..110308 -

Link to JBrowse

Properties
Property NameValue
ProductHistone H4 acetyltransferase, NuA4 complex, Eaf6
Orig transcript idgnl|cribi|Naga_100368g8.3798.mrna
Orig protein idgnl|cribi|Naga_100368g8.3798
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:109192..110308 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100368g8gene2216Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28361.1cds2313Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2321rna2321-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2321 ID=rna2321|Name=rna2321|organism=Nannochloropsis gaditana|type=mRNA|length=213bp
ATGCGTCAAATAAGTGTAGTATATATAAGATATGATGTACAAAATGTGAT
ATGTAACGGCGTGACGGGACGTGCACGGGAAGATTGTTCGAAAGAAGAAT
GGGACGAGGCAGAGAAGGGCTCGGTTTTGTCTATGCAGACCGGAGCTGTC
AGGTTGAAGCGCCTCCTCAACCCTTTACAGCCTCGCTTTTCATGTTCCTC
GAAACTTTGCTAG
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protein sequence of rna2321

>rna2321-protein ID=rna2321-protein|Name=rna2321|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MSSGVSLPDKVPTPAVHAGHSTSFPLPTLPASASPASTSALPPLPPGLSN
KGLSPEMEEILREQARVEQLLGQVEAEIAKREDDYFERTAHGNIVRGWEG
VLDNKPPPKRRYEGRERVFTWSSYTYWSRHGAGAQLQKQTSDASLDGSKG
FADGEEGVKRNRVSVVMPSPRDPKVMAARRRKKRQQQRRNHAGMGESSED
DEEMFM
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mRNA from alignment at CM002459.1:109192..110308-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2321 ID=rna2321|Name=rna2321|organism=Nannochloropsis gaditana|type=mRNA|length=1117bp|location=Sequence derived from alignment at CM002459.1:109192..110308- (Nannochloropsis gaditana)
GAATAGCATTGTTGCGCATGAGGGCAGGCGATGCCTGTCTGTCTGGTGTC CCGAGGCACGTTTGCCAACCCCGCCACCCAACGCGTCAGACTGTCCGAGC ACCCAAAACGACACAATCTCATTCATAAACGCCTTTAAGCCAAGCACGAC GGCATGGAGCCGAGAACCTGGTGCCTGAGGCATCGGTCGTCTAACCAGAA TTCTAGGACAAGGCCTCTGTCTATTTCTTTCACGTCCTCTTAGGACACGC GTGAGGGACTCTCCTTCGCCCATTTCTTGTGATCATAAAATTCATCAAGC GCCCTCGCTCATTGCCTCCCAAGACATGTAACCATGTCCCACCCACGCAC ATCCCATCCATCGCACGGTACAGGATCATAAATCATGTCCTCTGGTGTTT CACTGCCCGACAAGGTGCCAACTCCGGCAGTGCATGCTGGCCATAGCACC TCGTTCCCGCTTCCCACCCTCCCTGCCTCCGCATCGCCTGCTTCGACCAG CGCCCTGCCCCCGCTCCCGCCGGGCCTAAGCAACAAAGGACTCAGTCCTG AAATGGAGGAAATCCTGCGCGAGCAAGCCCGGGTCGAACAGTTGCTGGGG CAGGTGGAGGCCGAAATTGCCAAACGTGAAGATGACTACTTCGAACGGAC TGCGCACGGCAACATTGTGCGGGGGTGGGAGGGTGTTTTGGATAACAAGC CCCCACCCAAGCGTAGGTACGAAGGAAGAGAGCGTGTTTTCACGTGGTCA AGCTACACGTACTGGTCCCGGCACGGGGCAGGGGCGCAATTGCAAAAGCA AACCAGCGACGCCTCTTTGGACGGATCGAAGGGCTTTGCGGACGGGGAAG AAGGCGTGAAGCGGAACCGTGTGTCTGTGGTGATGCCAAGCCCACGGGAC CCGAAAGTGATGGCGGCAAGGAGGCGAAAGAAACGGCAGCAACAGCGTCG AAATCATGCCGGCATGGGGGAAAGCAGCGAGGACGACGAAGAGATGTTCA TGTAAAAAAAGCAACCACAAGATAAGCCTTGCCCGGCATGAATCGACATC GATTTGCCATATTCGGGTGGACCTGATTCCCTTTGCTTTGTGGAATTTTC TGGAATCTTCTCGAGAT
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Coding sequence (CDS) from alignment at CM002459.1:109192..110308-

>rna2321 ID=rna2321|Name=rna2321|organism=Nannochloropsis gaditana|type=CDS|length=621bp|location=Sequence derived from alignment at CM002459.1:109192..110308- (Nannochloropsis gaditana)
ATGTCCTCTGGTGTTTCACTGCCCGACAAGGTGCCAACTCCGGCAGTGCA
TGCTGGCCATAGCACCTCGTTCCCGCTTCCCACCCTCCCTGCCTCCGCAT
CGCCTGCTTCGACCAGCGCCCTGCCCCCGCTCCCGCCGGGCCTAAGCAAC
AAAGGACTCAGTCCTGAAATGGAGGAAATCCTGCGCGAGCAAGCCCGGGT
CGAACAGTTGCTGGGGCAGGTGGAGGCCGAAATTGCCAAACGTGAAGATG
ACTACTTCGAACGGACTGCGCACGGCAACATTGTGCGGGGGTGGGAGGGT
GTTTTGGATAACAAGCCCCCACCCAAGCGTAGGTACGAAGGAAGAGAGCG
TGTTTTCACGTGGTCAAGCTACACGTACTGGTCCCGGCACGGGGCAGGGG
CGCAATTGCAAAAGCAAACCAGCGACGCCTCTTTGGACGGATCGAAGGGC
TTTGCGGACGGGGAAGAAGGCGTGAAGCGGAACCGTGTGTCTGTGGTGAT
GCCAAGCCCACGGGACCCGAAAGTGATGGCGGCAAGGAGGCGAAAGAAAC
GGCAGCAACAGCGTCGAAATCATGCCGGCATGGGGGAAAGCAGCGAGGAC
GACGAAGAGATGTTCATGTAA
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Synonyms
Publications