EWM28356.1, cds2312 (CDS) Nannochloropsis gaditana

Overview
NameEWM28356.1
Unique Namecds2312
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:108869..108888 +
Alignment locationCM002459.1:108994..109186 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28356.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100368g9.3793.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:108869..108888 +
CM002459.1supercontigCM002459.1:108994..109186 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28356.1 vs. NCBI_GenBank
Match: gi|585110716|gb|EWM28356.1| (hypothetical protein Naga_100368g9 [Nannochloropsis gaditana])

HSP 1 Score: 146.362 bits (368), Expect = 1.372e-44
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 
Query:    1 MRQISVVYIRYDVQNVICNGVTGRAREDCSKEEWDEAEKGSVLSMQTGAVRLKRLLNPLQPRFSCSSKLC 70
            MRQISVVYIRYDVQNVICNGVTGRAREDCSKEEWDEAEKGSVLSMQTGAVRLKRLLNPLQPRFSCSSKLC
Sbjct:    1 MRQISVVYIRYDVQNVICNGVTGRAREDCSKEEWDEAEKGSVLSMQTGAVRLKRLLNPLQPRFSCSSKLC 70
The following BLAST results are available for this feature:
BLAST of EWM28356.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110716|gb|EWM28356.1|1.372e-44100.00hypothetical protein Naga_100368g9 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2320rna2320Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications