EWM28365.1, cds2308 (CDS) Nannochloropsis gaditana

Overview
NameEWM28365.1
Unique Namecds2308
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:99509..99787 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28365.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101258g2.4087.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:99509..99787 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28365.1 vs. NCBI_GenBank
Match: gi|585110732|gb|EWM28365.1| (hypothetical protein Naga_101258g2 [Nannochloropsis gaditana])

HSP 1 Score: 189.889 bits (481), Expect = 2.761e-61
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 
Query:    1 MDKNRSNAYNFRKQHETRCDEVTERLQPGKGLSSDVGVLLAPNIVRIVPEVASPALSGRSLIPPVNEAQKREPFLQKKESNICVSIKWRLPW 92
            MDKNRSNAYNFRKQHETRCDEVTERLQPGKGLSSDVGVLLAPNIVRIVPEVASPALSGRSLIPPVNEAQKREPFLQKKESNICVSIKWRLPW
Sbjct:    1 MDKNRSNAYNFRKQHETRCDEVTERLQPGKGLSSDVGVLLAPNIVRIVPEVASPALSGRSLIPPVNEAQKREPFLQKKESNICVSIKWRLPW 92
The following BLAST results are available for this feature:
BLAST of EWM28365.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110732|gb|EWM28365.1|2.761e-61100.00hypothetical protein Naga_101258g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2316rna2316Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications