EWM28405.1, cds2263 (CDS) Nannochloropsis gaditana

Overview
NameEWM28405.1
Unique Namecds2263
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1346099..1346138 +
Alignment locationCM002458.1:1346259..1346479 +
Alignment locationCM002458.1:1346616..1346954 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28405.1
Productcen
Orig transcript idgnl|cribi|Naga_100088g8.1224.mrna
GeneCEN
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1346099..1346138 +
CM002458.1supercontigCM002458.1:1346259..1346479 +
CM002458.1supercontigCM002458.1:1346616..1346954 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008914PtdEtn-bd_prot_PEBP
Homology
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|585110790|gb|EWM28405.1| (cen [Nannochloropsis gaditana])

HSP 1 Score: 402.905 bits (1034), Expect = 4.686e-142
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query:    1 MNFLRPLALTLLMVPSALAAPATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ 199
            MNFLRPLALTLLMVPSALAAPATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ
Sbjct:    1 MNFLRPLALTLLMVPSALAAPATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGLTPIGGFYFLAGPETAQ 199          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1047209949|dbj|BAV32137.1| (MOTHER OF FT AND TFL1 [Symplocarpus renifolius])

HSP 1 Score: 125.176 bits (313), Expect = 2.091e-32
Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 0
Query:    9 LTLLMVPSALAA------PATPAAASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMG--TNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQK---AEINPAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
            L+++++ SA A+       AT   + L++L  A +IPDVI  F P A +  +YG++  ++ G  I PSE+A  P+V   G   +   LYTL+MTDP   D  +   P +   +WLHWIVV++PGE    A G+ L PY  P PP G HRY F++F+Q     E+ P  P GR  F TR FA  NGL  P+   YF A  E A
Sbjct:   16 LSVVVLVSAFASLSLLLPVATSRRSQLDALVAARVIPDVIDAFSPAAEVSARYGRRDVVD-GCDIKPSESASRPAVWIRGRGCSGDNLYTLIMTDP---DAPSPSNPSER--EWLHWIVVDIPGE-CNAAKGKELVPYMGPEPPIGIHRYVFVVFKQNKTLGEVRP--PLGRGHFKTRGFAAQNGLGLPVAALYFNATKEPA 208          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1173708340|gb|ARE72523.1| (MFT1 [Actinidia chinensis var. chinensis])

HSP 1 Score: 113.235 bits (282), Expect = 3.124e-28
Identity = 74/176 (42.05%), Postives = 98/176 (55.68%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPA-VPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETAQ 199
            AAS++ L    +I DV+  F PT T+ V +G +  +  G  I PS A +PP VT  G +PQ+LYTLVMTDP   D  +   P  S  +W HWIV ++PG  + P  G+ + PY  P PP G HRY  +LF+QK+ +     P  R  F+TR FA   GL  P+   YF A  E A 
Sbjct:    2 AASVDPLVVGRVIGDVVDMFVPTVTMHVYFGSRH-VTNGCDIKPSVANNPPRVTISG-HPQQLYTLVMTDP---DAPSPSEP--SLREWAHWIVTDIPGGSS-PTQGKEVLPYMGPNPPVGIHRYILVLFQQKSPLEAVDQPISRAHFNTRTFAHQMGLGLPVATVYFNAHKEPAN 169          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1208499575|gb|OWM62629.1| (hypothetical protein CDL15_Pgr019923 [Punica granatum])

HSP 1 Score: 112.079 bits (279), Expect = 8.788e-28
Identity = 72/176 (40.91%), Postives = 98/176 (55.68%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPA-VPKGRDAFDTRAFAIANGLT-PIGGFYFLAGPETAQ 199
            A+S++ L    +I DV+  F PT  + V YG +  +  G  I PS +AD P VT  G  P +LYTLVMTDP   D  +   P  S  +W+HWIVV++PG   V + G+ + PY  P PP G HRY  +LF+Q+A +     P  R  F+TR FA   GL+ P+   YF +  E A 
Sbjct:    2 ASSVDPLIVGRVIGDVVDMFVPTVNISVNYGSKH-VNNGCDIKPSMSADTPKVTISG-RPDQLYTLVMTDP---DAPSPSEP--SMREWVHWIVVDIPGGTNV-SRGREILPYMGPRPPVGIHRYILVLFQQRAPLGLVDQPTSRANFNTRHFAAHFGLSLPVATVYFNSQKEPAN 169          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|410442707|gb|AFV67439.1| (centroradialis [Hordeum vulgare])

HSP 1 Score: 112.079 bits (279), Expect = 9.427e-28
Identity = 66/175 (37.71%), Postives = 86/175 (49.14%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQ-SAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
            A  LE L    +I +VI NF+PT  + V Y     +  G +  PS     P +   G + +  +TLVMTDP V       GP     W+ LHWIV ++PG        +V+  Y  P P  G HR+TF+LF+QK       P  RD F+TR FA  N L  P+   YF A  ETA
Sbjct:    2 ARVLEPLVVGKVIGEVIDNFNPTVKMTVTYSSNKQVFNGHEFFPSAVVSKPRIEVQGGDMRSFFTLVMTDPDVP------GPSDPYLWEHLHWIVSDIPGTTDASFGREVVS-YESPKPNIGIHRFTFVLFQQKKRQAMNAPSTRDYFNTRRFADENDLGLPVAAVYFNAQRETA 169          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1024017238|gb|KZV36488.1| (CEN-like protein 1-like [Dorcoceras hygrometricum])

HSP 1 Score: 111.309 bits (277), Expect = 2.103e-27
Identity = 67/171 (39.18%), Postives = 93/171 (54.39%), Query Frame = 0
Query:   30 ESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEIN-PAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
            ESL    II +V+  FDP   L V Y     +  G +++P+  A  P V   G + +  YTLVMTDP   D  +   P  S  + +HWIV ++PG     + G+ +  Y +P P  G HRYTF++F+QKA  +   +P  RD F+TR FA  NGL +P+   YF A  ETA
Sbjct:    6 ESLYVGRIIGEVVDCFDPCVQLNVIYNGNKHVSNGHELMPALVAAKPRVEIGGEDMRDAYTLVMTDP---DAPSPSDP--SLREHVHWIVTDIPGTTDA-SFGREVVCYEKPKPTLGIHRYTFVVFKQKARHSVKYLPASRDYFNTRRFAEENGLDSPVAALYFNAQRETA 170          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|922550710|ref|XP_013603337.1| (PREDICTED: protein MOTHER of FT and TF 1 isoform X1 [Brassica oleracea var. oleracea] >gi|674951679|emb|CDX81861.1| BnaC08g37400D [Brassica napus])

HSP 1 Score: 110.153 bits (274), Expect = 5.001e-27
Identity = 73/178 (41.01%), Postives = 99/178 (55.62%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAV--PKGRDAFDTRAFA--IANGLTPIGGFYFLAGPETAQ 199
            AAS++ L    +I DV+  F PTA + V +G +  +  G +I PS A +PP V+  G N  +LYTLVMTDP   D  +   P     +W+HWIVV++PG    P+ G+ + PY +P PP G HRY F+LF Q + +   V  P  R  F TR FA  +  GL P+   YF A  E A 
Sbjct:    2 AASVDPLVVGRVIGDVLDMFIPTANMSVYFGPKH-ITNGCEIKPSAAVNPPKVSISG-NSNELYTLVMTDP---DAPSPSEPNMR--EWVHWIVVDIPGGTN-PSKGKEILPYMEPRPPVGIHRYIFVLFRQNSPVGMMVQQPPSRANFSTRMFAGHLDLGL-PVATVYFNAQKEPAS 170          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|593794939|ref|XP_007160508.1| (hypothetical protein PHAVU_002G327700g [Phaseolus vulgaris] >gi|561033923|gb|ESW32502.1| hypothetical protein PHAVU_002G327700g [Phaseolus vulgaris])

HSP 1 Score: 110.153 bits (274), Expect = 5.249e-27
Identity = 69/176 (39.20%), Postives = 94/176 (53.41%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAV-PKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETAQ 199
            AAS++ L    +I DV+  F P+  + V YG +  +  G  I PS A +PP +T  G   + LYTL+MTDP   D  +   P     +W+HW+V ++PG    P  G+ + PY  P PP G HRY F+LFEQKA + P   P+ R  F TR FA    L  P+   YF +  E A 
Sbjct:    2 AASVDPLVVGRVIGDVVDMFVPSVNMSVYYGSKH-VTSGCDIKPSIAVNPPKLTLTGKK-ENLYTLIMTDP---DAPSPSEPNMR--EWIHWVVADIPGCTN-PFRGKEIIPYTGPKPPVGIHRYIFVLFEQKAPMGPVEQPESRGNFSTRTFAKDMDLGLPVATVYFNSQKEPAS 169          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1004339247|gb|AMP40725.1| (mother of FT and TFL1-like protein [Hevea brasiliensis] >gi|1004339252|gb|AMP40726.1| mother of FT and TFL1-like protein [Hevea brasiliensis])

HSP 1 Score: 109.768 bits (273), Expect = 7.445e-27
Identity = 72/178 (40.45%), Postives = 93/178 (52.25%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTN-PQKLYTLVMTDPGVLDIKTLRGPQQSAW-QWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEI--NPAVPKGRDAFDTRAFAIANGL-TPIGGFYFLAGPETA 198
            A SLE L    +I DV+  ++P A   V+YG +  +  G +I PS AA+ P V  MG+     LYT+VM DP          P +  W +WLHWIVV++P E +    G  L PY  P PP G HRY F LF+QKA +      P GR  F TR FA  +G   P+   YF +  E A
Sbjct:    2 ARSLEPLVVGKVIGDVLDMYNPVAEFTVRYGSKQ-IANGWEIKPSVAAEMPHVQIMGSRFSSDLYTMVMVDPDAPS------PSEPKWREWLHWIVVDIP-EGSDATKGHELVPYMGPQPPTGIHRYVFALFKQKAALMGRSRPPGGRGNFSTRQFAAQHGFGLPVAAVYFNSQKEPA 171          
BLAST of EWM28405.1 vs. NCBI_GenBank
Match: gi|1079444115|ref|XP_009117626.2| (PREDICTED: protein MOTHER of FT and TFL1 [Brassica rapa] >gi|674911430|emb|CDY21719.1| BnaA09g44700D [Brassica napus])

HSP 1 Score: 109.768 bits (273), Expect = 7.527e-27
Identity = 73/178 (41.01%), Postives = 98/178 (55.06%), Query Frame = 0
Query:   26 AASLESLKTAHIIPDVISNFDPTATLRVQYGKQAPLEMGEQILPSEAADPPSVTFMGTNPQKLYTLVMTDPGVLDIKTLRGPQQSAWQWLHWIVVNVPGEKAVPAAGQVLQPYGQPAPPAGNHRYTFILFEQKAEINPAV--PKGRDAFDTRAFA--IANGLTPIGGFYFLAGPETAQ 199
            AAS++ L    +I DV+  F PTA + V +G +  +  G +I PS A +PP V   G N  +LYTLVMTDP   D  +   P     +W+HWIVV++PG    P+ G+ + PY +P PP G HRY F+LF Q + +   V  P  R  F TR FA  +  GL P+   YF A  E A 
Sbjct:    2 AASVDPLVVGRVIGDVLDMFIPTANMSVYFGPKH-ITNGCEIKPSAAVNPPKVNISG-NSNELYTLVMTDP---DAPSPSEPNMR--EWVHWIVVDIPGGTN-PSKGKEILPYMEPRPPVGIHRYIFVLFRQNSPVGMMVQQPPSRANFSTRMFAGHLDLGL-PVATVYFNAQKEPAS 170          
The following BLAST results are available for this feature:
BLAST of EWM28405.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110790|gb|EWM28405.1|4.686e-142100.00cen [Nannochloropsis gaditana][more]
gi|1047209949|dbj|BAV32137.1|2.091e-3240.59MOTHER OF FT AND TFL1 [Symplocarpus renifolius][more]
gi|1173708340|gb|ARE72523.1|3.124e-2842.05MFT1 [Actinidia chinensis var. chinensis][more]
gi|1208499575|gb|OWM62629.1|8.788e-2840.91hypothetical protein CDL15_Pgr019923 [Punica grana... [more]
gi|410442707|gb|AFV67439.1|9.427e-2837.71centroradialis [Hordeum vulgare][more]
gi|1024017238|gb|KZV36488.1|2.103e-2739.18CEN-like protein 1-like [Dorcoceras hygrometricum][more]
gi|922550710|ref|XP_013603337.1|5.001e-2741.01PREDICTED: protein MOTHER of FT and TF 1 isoform X... [more]
gi|593794939|ref|XP_007160508.1|5.249e-2739.20hypothetical protein PHAVU_002G327700g [Phaseolus ... [more]
gi|1004339247|gb|AMP40725.1|7.445e-2740.45mother of FT and TFL1-like protein [Hevea brasilie... [more]
gi|1079444115|ref|XP_009117626.2|7.527e-2741.01PREDICTED: protein MOTHER of FT and TFL1 [Brassica... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2271rna2271Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications