Naga_100088g9, gene2170 (gene) Nannochloropsis gaditana

Overview
NameNaga_100088g9
Unique Namegene2170
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1342903..1345559 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100088g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1342903..1345559 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL112ngnoL112Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00090NO04G00090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2270rna2270-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2269rna2269-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2270rna2270Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2269rna2269Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2270

>rna2270-protein ID=rna2270-protein|Name=rna2270|organism=Nannochloropsis gaditana|type=polypeptide|length=490bp
MDSSKTSDTPSFLFSFLLSAENASKAFLLWCSLEVLFYFVINRLIYPRIK
QLRAAPSHPPEKSPLECLARLTDALHRLRGVYSPESFWSGWFKGAMHENI
RRNNVKEFLCWAIWHVKSSEELAKSDVLALEKTVVLMERLQGKSFPAGHN
PEVEHVAFTREPLYFAHRLLIFYVVVKCAQLMGHGFLLLTGHRRYVTPTH
NLTYWHRPCQQEEGSIKQPPLLFFHGISPGIWFYIPFLTRLGRGREIILL
EVPHIVTQLSFEAPDRIETVQSLAEVLALHSISKCAVAGHSFGSIIAGWA
ATAFPQHVKQLVLIDPVCLLLCLPDVAVNFLYRSPPTNLFHRTLKDFIDP
SSEITVSHALRRHFWWYQNICWLQDVSCPLVVALSSEDDIVPSTAIHYYV
QRHYRMQEAVKHEKEDDAGEMTDQSNASGSGRLIYWRGIGHGQMLVSLKA
QDRLIAAICKQAMESGLATRAEDIKNSGQKSVRRRRVTAA
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protein sequence of rna2269

>rna2269-protein ID=rna2269-protein|Name=rna2269|organism=Nannochloropsis gaditana|type=polypeptide|length=490bp
MDSSKTSDTPSFLFSFLLSAENASKAFLLWCSLEVLFYFVINRLIYPRIK
QLRAAPSHPPEKSPLECLARLTDALHRLRGVYSPESFWSGWFKGAMHENI
RRNNVKEFLCWAIWHVKSSEELAKSDVLALEKTVVLMERLQGKSFPAGHN
PEVEHVAFTREPLYFAHRLLIFYVVVKCAQLMGHGFLLLTGHRRYVTPTH
NLTYWHRPCQQEEGSIKQPPLLFFHGISPGIWFYIPFLTRLGRGREIILL
EVPHIVTQLSFEAPDRIETVQSLAEVLALHSISKCAVAGHSFGSIIAGWA
ATAFPQHVKQLVLIDPVCLLLCLPDVAVNFLYRSPPTNLFHRTLKDFIDP
SSEITVSHALRRHFWWYQNICWLQDVSCPLVVALSSEDDIVPSTAIHYYV
QRHYRMQEAVKHEKEDDAGEMTDQSNASGSGRLIYWRGIGHGQMLVSLKA
QDRLIAAICKQAMESGLATRAEDIKNSGQKSVRRRRVTAA
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Synonyms
Publications