EWM28467.1, cds2207 (CDS) Nannochloropsis gaditana

Overview
NameEWM28467.1
Unique Namecds2207
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1181601..1182617 +
Alignment locationCM002458.1:1182879..1183748 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28467.1
Productcryptochrome chloroplastic mitochondrial-like protein
Orig transcript idgnl|cribi|Naga_100190g4.3118.mrna
GeneCRY3
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1181601..1182617 +
CM002458.1supercontigCM002458.1:1182879..1183748 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003913DNA photolyase activity
Vocabulary: INTERPRO
TermDefinition
IPR018394DNA_photolyase_1_CS_C
IPR006050DNA_photolyase_N
IPR014133Cryptochrome_DASH
IPR005101Photolyase_FAD-bd/Cryptochr_C
IPR014729Rossmann-like_a/b/a_fold
IPR002081Cryptochrome/DNA_photolyase_1
Homology
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|585110877|gb|EWM28467.1| (cryptochrome chloroplastic mitochondrial-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1289.25 bits (3335), Expect = 0.000e+0
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0
Query:    1 MFPLLPRSAALTTLVCHILVRARAGFPHSSASTVTAFVRPFLTPILATSGTGQHWLHRAVPRAAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRLGGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKGRAPFKGPRRPTNRLQSDYL 628
            MFPLLPRSAALTTLVCHILVRARAGFPHSSASTVTAFVRPFLTPILATSGTGQHWLHRAVPRAAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRLGGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKGRAPFKGPRRPTNRLQSDYL
Sbjct:    1 MFPLLPRSAALTTLVCHILVRARAGFPHSSASTVTAFVRPFLTPILATSGTGQHWLHRAVPRAAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRLGGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKGRAPFKGPRRPTNRLQSDYL 628          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|298708263|emb|CBJ48326.1| (cryptochrome 3 [Ectocarpus siliculosus])

HSP 1 Score: 490.73 bits (1262), Expect = 1.535e-164
Identity = 260/535 (48.60%), Postives = 333/535 (62.24%), Query Frame = 0
Query:   63 AAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVP----RLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKS--------QFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKF 582
            + VA+++T     G +   ++   G+VW+KCTDLR  DHEPL+LAH  +SHVAH+FC D RWFG     S  GT +    R RFLLE+V DL+TRL   G +++++ G PE  +P    RL        VYAH ++ SEE  V   VK  LS                  E+WGN L+   D+P+ +    +P +FT FRKAVE   ++R  +P P   +P P       + NA+   LT+ A+  T E  LG      +    D  SVL F GGETAGL R+Q Y W++D L++YK TRNG+LG  +SSKFSPWLA G +SPR I  EIRKYE +R+ NDSTYWL FEL+ RDFFR+SA+ +GNA F LGG + +  +  W+ D  L  AWKEG TGYP VDANMRELK +GFMSNRGRQ+VASF T+D+ ++WRLGA  FEE LLDYDP SNYGNW Y AGVG DPREDRYFS+ KQ  TYD +  Y++HW PEL  +  + L +       +R   +V   VYP  +VPLKF
Sbjct:    3 SMVATSLTAGGASGIARGDTI---GVVWFKCTDLRLEDHEPLALAHRNSSHVAHVFCIDDRWFGH----SRRGTRRMSAARCRFLLESVADLQTRLRAKGSDLLIRRGHPENAIPAVAARLGSGASAVTVYAHPDLCSEENDVHAAVKSALSLVGSAGGVGGDATGVSVTEVWGNTLHDPSDLPY-DFPNGLPEVFTPFRKAVEPNCKIRSPVPLPSPFRPLP----AGLHDNAVTPTLTV-AIPTTEELGLG------TAPERDARSVLHFIGGETAGLRRVQTYIWEEDHLREYKVTRNGLLGGGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLEMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYVRHWLPELAMLTTEALQSAGGITATLREVHSVPTSVYPDPVVPLKF 518          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|168067358|ref|XP_001785586.1| (photolyase-like protein [Physcomitrella patens] >gi|162662787|gb|EDQ49598.1| photolyase-like protein [Physcomitrella patens])

HSP 1 Score: 489.574 bits (1259), Expect = 7.118e-164
Identity = 265/531 (49.91%), Postives = 334/531 (62.90%), Query Frame = 0
Query:   66 ASTVTMTNGEGTSSDTSVKKCGL--VWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEG-KSQFRE--LWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGG 588
            A T+T++     S  TS K  G+  VW++  DLR  D+E L  A   +  V  L+  DPR +G       P   KTG LRA+F++E+V +L+  L   G ++IV+ GKPE  VP +AK++    VYAH+E  SEE  V  GVK GL+    G K Q R   +WG  LYH+DD+PF     ++P ++TQFRK VE   +VR  L  P  + P P   ++ E    L    T+  LG    E               P  V+ F+GGETA LARLQ+YFW+KD L+ YKETRNGMLG +YS+KFSPWLA G +SPR I  E+++YE ERV NDSTYW+ FELIWRD+FRF +I +GNA F LGGP+    K  W ++  L+ AW+EG TGYPL+DANM+EL  TGFMSNRGRQ+V SFL RD+GL+WR+G  WFE  LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ ATYDPE  Y+ HW P L+  P      P + + P         + Y R IVPLKFG G GG
Sbjct:   43 AVTLTVSASGEKSKMTSRKGTGIAIVWFR-NDLRISDNEALLKAWQSSQAVVPLYVVDPRLYGQTYHFGFP---KTGELRAQFIMESVANLRDNLRQRGLDLIVRQGKPEDVVPSIAKSIGAHTVYAHKETCSEETTVETGVKRGLANLEGGPKMQIRLDFVWGGTLYHLDDLPFS--PSELPDVYTQFRKGVEYNCKVRPALKMPTQMGPLP--ESLSEKIGELGDIPTMAELGLKYREQ-------------SPLGVMHFEGGETAALARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVANDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKR-WSQNRELFEAWREGRTGYPLIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQSATYDPEGEYVAHWLPSLKQSP------PKQRNFP--------GDAYLRPIVPLKFGMGSGG 537          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|1130856591|dbj|GAV63671.1| (DNA_photolyase domain-containing protein/FAD_binding_7 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 487.649 bits (1254), Expect = 4.285e-162
Identity = 260/554 (46.93%), Postives = 342/554 (61.73%), Query Frame = 0
Query:   73 NGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSK--------------ATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKG 609
            NG+GT+         +VW++  DLR LD+E L  A   +  V  ++C DPR F         G  KTG  RA+FL+E + DLK  L   G N+++K G PE  +P LAK+     VYA +E  SEE+ + K V +GL +              +T+G SQ + +WG+ +YHIDD+PF      +P ++TQFRK+VE+K R+R  +  P SL P P    + +N      P +++ LG   ++ +                 + F GGE+A L+R+ EYFW KDLL+ YKETRNGMLG DYS+KFSPWLA+GS+SPR IF E+++YERER  NDSTYW+ FELIWRD+FRF +I +GN+ F LGGP+   R+  W +D  L+ +WK+G TGYPL+DANMREL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE  LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ  TYDPE RY+ +W P+L  +P      P +               Y +QIVPLK+G       +  G  +G    GG   KG
Sbjct:  135 NGKGTA---------IVWFR-NDLRILDNEALFKAWVSSEMVLPVYCVDPRLFETT---YYFGFHKTGASRAQFLIECLVDLKRNLMKRGLNLLIKHGTPEEVIPSLAKSFGAHTVYAQKESCSEELNIEKLVIKGLRQVMLPSSSNKSTIVGSTDG-SQLQLIWGSTMYHIDDLPFNT--SSLPDVYTQFRKSVEAKCRIRGCIKLPASLGPPP----IVDNWGG---PPSIDQLGLQSQKVIKG---------------MKFVGGESAALSRVSEYFWKKDLLRMYKETRNGMLGSDYSTKFSPWLASGSLSPRFIFEEVKRYERERQANDSTYWVLFELIWRDYFRFLSIKYGNSLFHLGGPRKVERQ--WSQDQKLFDSWKDGCTGYPLIDANMRELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGRYVAYWLPQLEELPKSERHFPGK--------------SYIQQIVPLKYGNVNKHHSQDRGMVAGRSNFGGKQTKG 634          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|1091634644|ref|XP_018679600.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial isoform X1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 485.337 bits (1248), Expect = 9.015e-162
Identity = 261/544 (47.98%), Postives = 345/544 (63.42%), Query Frame = 0
Query:   59 AVPRAAVASTVTMTNGE-GTSSDTSVKKCG----LVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKAT--EGKSQFRE--------LWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584
            AVP  +    V  ++   G  S  S+K+ G    ++W++  DLR +D+E L  A A +  V  ++C DPR FG       P   KTG LRA+FL+E +EDLK  L   G N++V+ GKPE  +P +A+      VYA +E  SEE+ V K V +GL +    +G +  ++        +WG+ +YHIDD+PF    +++P ++TQFRKAVESK  +R     P SL P PP + +++       P TLE LG           S AS         + F GGE A L R+ EYFW KDLL+ YKETRNGM+GPDYS+KFSPWLA+GS+SPR I+ E+R+YE++RV NDSTYW+ FELIWRD+F+F ++  GN+ F LGGP+    K  W +D +L+ +W++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE  LLDYDP SNYGNW Y AGVG+DPREDRYFS+PKQ  TYDPE  Y+ +W PELR +P +    P               + Y +QIVPLKFG 
Sbjct:   61 AVPGLSADEVVAASDEAFGRHSSPSLKRSGSGVAIMWFR-NDLRLMDNEALVRAWAASESVLPVYCVDPRNFGATHYFGFP---KTGALRAQFLIECLEDLKKNLMKRGLNLLVRFGKPEDILPSIARVFSAHTVYAQKETCSEELLVEKLVLKGLQQVVLPQGGTSNQKSVGPKLVLVWGSTMYHIDDIPFST--KNLPDVYTQFRKAVESKCSIRGCFKLPVSLGP-PPNTGLDQIDGWGTIP-TLEQLGLKE--------SKASQH----EQGIHFLGGENAALGRISEYFWKKDLLRVYKETRNGMMGPDYSTKFSPWLASGSLSPRYIYEEVRRYEKQRVANDSTYWVLFELIWRDYFKFISMKHGNSIFHLGGPRNVVSK--WSQDRSLFESWRDGRTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRQLPKERRNFPG--------------QSYIKQIVPLKFGN 568          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|848917051|ref|XP_012855999.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Erythranthe guttata])

HSP 1 Score: 484.182 bits (1245), Expect = 9.281e-162
Identity = 250/515 (48.54%), Postives = 325/515 (63.11%), Query Frame = 0
Query:   76 GTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSV---LMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584
             T+SD   K   +VW++  DLR LD+E L  A   +  V  ++C DPR FG       P   KTG LRA+FL E + DLKT L   G N++++ GKPE  +P LAK      VY  +E  SEE+ V + V + L K     ++   +WG  +YH+DD+PF      +P ++TQFRK+VESK+ VR+ +  PPSL P+P                          ED G V    S   V+P  V   + F GGE+A L+R+ EYFW KDL++ YK TRNGMLG DYS+KFSPWLA+GS+SPR I+ E+++YE++R  NDSTYW+ FELIWRD+FRF +I  GN+ F  GGP+    +  W ++ AL+ AWK+G TGYPL+DANM+EL +TGFMSNRGRQ+V SFL RDMG++WR+GA WFE  LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ   YDPE  Y+ +W P+LR +P +   NP             G  +Y + IVPLKFG 
Sbjct:   73 STTSDRKGKGVAIVWFR-NDLRILDNEVLFKAWVSSEVVLPVYCIDPRLFGATHFFGFP---KTGALRAQFLTECLADLKTNLMKRGLNLLIQRGKPEQILPSLAKTYGAHTVYVQKETCSEEINVERRVSQNLQKEFVVSTKLELIWGCTMYHVDDLPFDC--TSLPDVYTQFRKSVESKSVVRRCIRVPPSLGPSP------------------------NVEDWGCVPE-TSSLGVEPIKVVKGMAFAGGESAALSRVHEYFWKKDLIRTYKVTRNGMLGSDYSTKFSPWLASGSLSPRFIYEEVKRYEKQREANDSTYWVLFELIWRDYFRFLSIKQGNSLFHAGGPR--KVQTNWSQNRALFDAWKDGRTGYPLIDANMKELSSTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPQLRALPKEKRHNP-------------GMMLYIKTIVPLKFGN 541          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|604302514|gb|EYU22090.1| (hypothetical protein MIMGU_mgv1a004481mg [Erythranthe guttata])

HSP 1 Score: 482.641 bits (1241), Expect = 9.697e-162
Identity = 250/514 (48.64%), Postives = 325/514 (63.23%), Query Frame = 0
Query:   77 TSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSV---LMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584
            T+SD   K   +VW++  DLR LD+E L  A   +  V  ++C DPR FG       P   KTG LRA+FL E + DLKT L   G N++++ GKPE  +P LAK      VY  +E  SEE+ V + V + L K     ++   +WG  +YH+DD+PF      +P ++TQFRK+VESK+ VR+ +  PPSL P+P                          ED G V    S   V+P  V   + F GGE+A L+R+ EYFW KDL++ YK TRNGMLG DYS+KFSPWLA+GS+SPR I+ E+++YE++R  NDSTYW+ FELIWRD+FRF +I  GN+ F  GGP+    +  W ++ AL+ AWK+G TGYPL+DANM+EL +TGFMSNRGRQ+V SFL RDMG++WR+GA WFE  LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ   YDPE  Y+ +W P+LR +P +   NP             G  +Y + IVPLKFG 
Sbjct:   39 TTSDRKGKGVAIVWFR-NDLRILDNEVLFKAWVSSEVVLPVYCIDPRLFGATHFFGFP---KTGALRAQFLTECLADLKTNLMKRGLNLLIQRGKPEQILPSLAKTYGAHTVYVQKETCSEEINVERRVSQNLQKEFVVSTKLELIWGCTMYHVDDLPFDC--TSLPDVYTQFRKSVESKSVVRRCIRVPPSLGPSP------------------------NVEDWGCVPE-TSSLGVEPIKVVKGMAFAGGESAALSRVHEYFWKKDLIRTYKVTRNGMLGSDYSTKFSPWLASGSLSPRFIYEEVKRYEKQREANDSTYWVLFELIWRDYFRFLSIKQGNSLFHAGGPR--KVQTNWSQNRALFDAWKDGRTGYPLIDANMKELSSTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPQLRALPKEKRHNP-------------GMMLYIKTIVPLKFGN 506          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|694997034|ref|XP_009397250.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial isoform X2 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 485.337 bits (1248), Expect = 1.061e-161
Identity = 258/544 (47.43%), Postives = 343/544 (63.05%), Query Frame = 0
Query:   59 AVPRAAVASTVTMTNGE-GTSSDTSVKKCG----LVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKAT--EGKSQFRE--------LWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584
            AVP  +    V  ++   G  S  S+K+ G    ++W++  DLR +D+E L  A A +  V  ++C DPR FG       P   KTG LRA+FL+E +EDLK  L   G N++V+ GKPE  +P +A+      VYA +E  SEE+ V K V +GL +    +G +  ++        +WG+ +YHIDD+PF    +++P ++TQFRKAVESK  +R     P SL P PP + +++       P TLE LG    +                   + F GGE A L R+ EYFW KDLL+ YKETRNGM+GPDYS+KFSPWLA+GS+SPR I+ E+R+YE++RV NDSTYW+ FELIWRD+F+F ++  GN+ F LGGP+    K  W +D +L+ +W++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE  LLDYDP SNYGNW Y AGVG+DPREDRYFS+PKQ  TYDPE  Y+ +W PELR +P +    P               + Y +QIVPLKFG 
Sbjct:   61 AVPGLSADEVVAASDEAFGRHSSPSLKRSGSGVAIMWFR-NDLRLMDNEALVRAWAASESVLPVYCVDPRNFGATHYFGFP---KTGALRAQFLIECLEDLKKNLMKRGLNLLVRFGKPEDILPSIARVFSAHTVYAQKETCSEELLVEKLVLKGLQQVVLPQGGTSNQKSVGPKLVLVWGSTMYHIDDIPFST--KNLPDVYTQFRKAVESKCSIRGCFKLPVSLGP-PPNTGLDQIDGWGTIP-TLEQLGLKESKH---------------EQGIHFLGGENAALGRISEYFWKKDLLRVYKETRNGMMGPDYSTKFSPWLASGSLSPRYIYEEVRRYEKQRVANDSTYWVLFELIWRDYFKFISMKHGNSIFHLGGPRNVVSK--WSQDRSLFESWRDGRTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRQLPKERRNFPG--------------QSYIKQIVPLKFGN 565          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|1150172996|ref|XP_020228573.1| (cryptochrome DASH, chloroplastic/mitochondrial [Cajanus cajan])

HSP 1 Score: 482.256 bits (1240), Expect = 1.340e-160
Identity = 259/544 (47.61%), Postives = 336/544 (61.76%), Query Frame = 0
Query:   78 SSDT--SVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKA------------TEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGG-GGIKGSGGKSGSKRGG 603
            +SDT  S K   +VW++  DLR LD+E L  A   +  V  ++C DPR F        P   KTG LRA+FLLE + DL+  L   G N++V+ GKPE  +P LAKA +V  VYA +E  SEE+ V + V  GL +             +    + + +WG  +YH+DD+PF      +P ++TQFRK VE K  +R  +  P SL P P    + E+   L S   LE LG   +               + S  + F GGETA L+R+ EYFW KDLL+ YKETRNGMLGPDYS+KFSPWLA+GS+SPR I  E+++YE ER+ N STYW+ FELIWRD+FRF ++ +GN+ F LGGP+    ++ W +D  L+ AW++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE  LLDYDPCSNYGNW Y +GVG+DPREDRYFS+PKQ  TYDPE  Y+ +W P+LR IP +    P             G  +Y  Q+VPLKFG   G    K  G +  + RG 
Sbjct:   82 TSDTKRSGKGTAIVWFR-NDLRVLDNEALYKAWLYSETVLPVYCVDPRLFATTYHFGFP---KTGALRAQFLLECLADLRKNLMKKGLNLLVQHGKPEDILPSLAKAFRVHTVYAQKETCSEELNVERLVIRGLQQVVISPEESSGVTVSNNIPKLQFVWGTTMYHLDDLPFD--ATCLPDVYTQFRKIVEDKCTIRSCIKLPASLGPPP----LVEDWGCLPS---LEQLGLCSQ---------------NVSKGMKFVGGETAALSRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRYENERLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHLGGPRK--AQHNWSQDKKLFEAWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRKIPKEKRNFP-------------GNLLYIPQVVPLKFGTASGHNKDKSYGARRTNDRGS 582          
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|565458772|ref|XP_006287385.1| (hypothetical protein CARUB_v10000591mg [Capsella rubella] >gi|482556091|gb|EOA20283.1| hypothetical protein CARUB_v10000591mg [Capsella rubella])

HSP 1 Score: 481.1 bits (1237), Expect = 1.813e-160
Identity = 257/544 (47.24%), Postives = 336/544 (61.76%), Query Frame = 0
Query:   66 ASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSV---LMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGG-GGGGIKGSGGKSGSKRG 602
            +S++   NG+G S         ++W++  DLR LD++ L  A + +  +  ++C DPR F        P   KTG LR  FL+E + DL+  L   G N++++ GKPE  VP LAK      V+AH+E  SEEV V + V +GL     G ++   +WG+ +YH DD+PF  L  D+P ++TQFRK+VE+K  +R     P SL P P       + +      +LE LG                  ++P  V   + F GGE+AGL+R+ EYFW KDLL+ YKETRNGMLGPDYS+KFSPWLA G ISPR+I+ E+++YE+ERV N+STYW+ FELIWRD+FRF +I  GN+ F LGGP+    K  W +D  L+ +W++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMGL+WR+GA WFE  LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ   YDPE  Y+  W  +LR +P +    P R              +Y   +VPLK G G   GG K  GG  GS  G
Sbjct:   71 SSSLMKRNGKGVS---------IIWFR-NDLRVLDNDALYKAWSSSETLLPVYCLDPRLFHTTHFFDFP---KTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEDIVPSLAKDFGAHTVFAHKETCSEEVDVERLVNQGLKGVGNGTTKLELVWGSTMYHKDDLPFDVL--DLPDVYTQFRKSVEAKCSIRSSTRVPLSLGPTP-------SVDNWGDVPSLEQLG------------------IEPQEVTRGMRFVGGESAGLSRVFEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLAFGCISPRIIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGK--WSQDKRLFESWRDGKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRL-------------MYIDTVVPLKHGNGPMAGGSKSGGGFRGSHSG 559          
The following BLAST results are available for this feature:
BLAST of EWM28467.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110877|gb|EWM28467.1|0.000e+0100.00cryptochrome chloroplastic mitochondrial-like prot... [more]
gi|298708263|emb|CBJ48326.1|1.535e-16448.60cryptochrome 3 [Ectocarpus siliculosus][more]
gi|168067358|ref|XP_001785586.1|7.118e-16449.91photolyase-like protein [Physcomitrella patens] >g... [more]
gi|1130856591|dbj|GAV63671.1|4.285e-16246.93DNA_photolyase domain-containing protein/FAD_bindi... [more]
gi|1091634644|ref|XP_018679600.1|9.015e-16247.98PREDICTED: cryptochrome DASH, chloroplastic/mitoch... [more]
gi|848917051|ref|XP_012855999.1|9.281e-16248.54PREDICTED: cryptochrome DASH, chloroplastic/mitoch... [more]
gi|604302514|gb|EYU22090.1|9.697e-16248.64hypothetical protein MIMGU_mgv1a004481mg [Erythran... [more]
gi|694997034|ref|XP_009397250.1|1.061e-16147.43PREDICTED: cryptochrome DASH, chloroplastic/mitoch... [more]
gi|1150172996|ref|XP_020228573.1|1.340e-16047.61cryptochrome DASH, chloroplastic/mitochondrial [Ca... [more]
gi|565458772|ref|XP_006287385.1|1.813e-16047.24hypothetical protein CARUB_v10000591mg [Capsella r... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2215rna2215Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications