EWM28467.1, cds2207 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|585110877|gb|EWM28467.1| (cryptochrome chloroplastic mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1289.25 bits (3335), Expect = 0.000e+0 Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0 Query: 1 MFPLLPRSAALTTLVCHILVRARAGFPHSSASTVTAFVRPFLTPILATSGTGQHWLHRAVPRAAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRLGGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKGRAPFKGPRRPTNRLQSDYL 628 MFPLLPRSAALTTLVCHILVRARAGFPHSSASTVTAFVRPFLTPILATSGTGQHWLHRAVPRAAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRLGGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKGRAPFKGPRRPTNRLQSDYL Sbjct: 1 MFPLLPRSAALTTLVCHILVRARAGFPHSSASTVTAFVRPFLTPILATSGTGQHWLHRAVPRAAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRLGGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKGRAPFKGPRRPTNRLQSDYL 628
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|298708263|emb|CBJ48326.1| (cryptochrome 3 [Ectocarpus siliculosus]) HSP 1 Score: 490.73 bits (1262), Expect = 1.535e-164 Identity = 260/535 (48.60%), Postives = 333/535 (62.24%), Query Frame = 0 Query: 63 AAVASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVP----RLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKS--------QFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKF 582 + VA+++T G + ++ G+VW+KCTDLR DHEPL+LAH +SHVAH+FC D RWFG S GT + R RFLLE+V DL+TRL G +++++ G PE +P RL VYAH ++ SEE V VK LS E+WGN L+ D+P+ + +P +FT FRKAVE ++R +P P +P P + NA+ LT+ A+ T E LG + D SVL F GGETAGL R+Q Y W++D L++YK TRNG+LG +SSKFSPWLA G +SPR I EIRKYE +R+ NDSTYWL FEL+ RDFFR+SA+ +GNA F LGG + + + W+ D L AWKEG TGYP VDANMRELK +GFMSNRGRQ+VASF T+D+ ++WRLGA FEE LLDYDP SNYGNW Y AGVG DPREDRYFS+ KQ TYD + Y++HW PEL + + L + +R +V VYP +VPLKF Sbjct: 3 SMVATSLTAGGASGIARGDTI---GVVWFKCTDLRLEDHEPLALAHRNSSHVAHVFCIDDRWFGH----SRRGTRRMSAARCRFLLESVADLQTRLRAKGSDLLIRRGHPENAIPAVAARLGSGASAVTVYAHPDLCSEENDVHAAVKSALSLVGSAGGVGGDATGVSVTEVWGNTLHDPSDLPY-DFPNGLPEVFTPFRKAVEPNCKIRSPVPLPSPFRPLP----AGLHDNAVTPTLTV-AIPTTEELGLG------TAPERDARSVLHFIGGETAGLRRVQTYIWEEDHLREYKVTRNGLLGGGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLEMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYVRHWLPELAMLTTEALQSAGGITATLREVHSVPTSVYPDPVVPLKF 518
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|168067358|ref|XP_001785586.1| (photolyase-like protein [Physcomitrella patens] >gi|162662787|gb|EDQ49598.1| photolyase-like protein [Physcomitrella patens]) HSP 1 Score: 489.574 bits (1259), Expect = 7.118e-164 Identity = 265/531 (49.91%), Postives = 334/531 (62.90%), Query Frame = 0 Query: 66 ASTVTMTNGEGTSSDTSVKKCGL--VWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEG-KSQFRE--LWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGG 588 A T+T++ S TS K G+ VW++ DLR D+E L A + V L+ DPR +G P KTG LRA+F++E+V +L+ L G ++IV+ GKPE VP +AK++ VYAH+E SEE V GVK GL+ G K Q R +WG LYH+DD+PF ++P ++TQFRK VE +VR L P + P P ++ E L T+ LG E P V+ F+GGETA LARLQ+YFW+KD L+ YKETRNGMLG +YS+KFSPWLA G +SPR I E+++YE ERV NDSTYW+ FELIWRD+FRF +I +GNA F LGGP+ K W ++ L+ AW+EG TGYPL+DANM+EL TGFMSNRGRQ+V SFL RD+GL+WR+G WFE LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ ATYDPE Y+ HW P L+ P P + + P + Y R IVPLKFG G GG Sbjct: 43 AVTLTVSASGEKSKMTSRKGTGIAIVWFR-NDLRISDNEALLKAWQSSQAVVPLYVVDPRLYGQTYHFGFP---KTGELRAQFIMESVANLRDNLRQRGLDLIVRQGKPEDVVPSIAKSIGAHTVYAHKETCSEETTVETGVKRGLANLEGGPKMQIRLDFVWGGTLYHLDDLPFS--PSELPDVYTQFRKGVEYNCKVRPALKMPTQMGPLP--ESLSEKIGELGDIPTMAELGLKYREQ-------------SPLGVMHFEGGETAALARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVANDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKR-WSQNRELFEAWREGRTGYPLIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQSATYDPEGEYVAHWLPSLKQSP------PKQRNFP--------GDAYLRPIVPLKFGMGSGG 537
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|1130856591|dbj|GAV63671.1| (DNA_photolyase domain-containing protein/FAD_binding_7 domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 487.649 bits (1254), Expect = 4.285e-162 Identity = 260/554 (46.93%), Postives = 342/554 (61.73%), Query Frame = 0 Query: 73 NGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSK--------------ATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGGGGIKGSGGKSGSKRGGGGGGKG 609 NG+GT+ +VW++ DLR LD+E L A + V ++C DPR F G KTG RA+FL+E + DLK L G N+++K G PE +P LAK+ VYA +E SEE+ + K V +GL + +T+G SQ + +WG+ +YHIDD+PF +P ++TQFRK+VE+K R+R + P SL P P + +N P +++ LG ++ + + F GGE+A L+R+ EYFW KDLL+ YKETRNGMLG DYS+KFSPWLA+GS+SPR IF E+++YERER NDSTYW+ FELIWRD+FRF +I +GN+ F LGGP+ R+ W +D L+ +WK+G TGYPL+DANMREL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ TYDPE RY+ +W P+L +P P + Y +QIVPLK+G + G +G GG KG Sbjct: 135 NGKGTA---------IVWFR-NDLRILDNEALFKAWVSSEMVLPVYCVDPRLFETT---YYFGFHKTGASRAQFLIECLVDLKRNLMKRGLNLLIKHGTPEEVIPSLAKSFGAHTVYAQKESCSEELNIEKLVIKGLRQVMLPSSSNKSTIVGSTDG-SQLQLIWGSTMYHIDDLPFNT--SSLPDVYTQFRKSVEAKCRIRGCIKLPASLGPPP----IVDNWGG---PPSIDQLGLQSQKVIKG---------------MKFVGGESAALSRVSEYFWKKDLLRMYKETRNGMLGSDYSTKFSPWLASGSLSPRFIFEEVKRYERERQANDSTYWVLFELIWRDYFRFLSIKYGNSLFHLGGPRKVERQ--WSQDQKLFDSWKDGCTGYPLIDANMRELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGRYVAYWLPQLEELPKSERHFPGK--------------SYIQQIVPLKYGNVNKHHSQDRGMVAGRSNFGGKQTKG 634
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|1091634644|ref|XP_018679600.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial isoform X1 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 485.337 bits (1248), Expect = 9.015e-162 Identity = 261/544 (47.98%), Postives = 345/544 (63.42%), Query Frame = 0 Query: 59 AVPRAAVASTVTMTNGE-GTSSDTSVKKCG----LVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKAT--EGKSQFRE--------LWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584 AVP + V ++ G S S+K+ G ++W++ DLR +D+E L A A + V ++C DPR FG P KTG LRA+FL+E +EDLK L G N++V+ GKPE +P +A+ VYA +E SEE+ V K V +GL + +G + ++ +WG+ +YHIDD+PF +++P ++TQFRKAVESK +R P SL P PP + +++ P TLE LG S AS + F GGE A L R+ EYFW KDLL+ YKETRNGM+GPDYS+KFSPWLA+GS+SPR I+ E+R+YE++RV NDSTYW+ FELIWRD+F+F ++ GN+ F LGGP+ K W +D +L+ +W++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE LLDYDP SNYGNW Y AGVG+DPREDRYFS+PKQ TYDPE Y+ +W PELR +P + P + Y +QIVPLKFG Sbjct: 61 AVPGLSADEVVAASDEAFGRHSSPSLKRSGSGVAIMWFR-NDLRLMDNEALVRAWAASESVLPVYCVDPRNFGATHYFGFP---KTGALRAQFLIECLEDLKKNLMKRGLNLLVRFGKPEDILPSIARVFSAHTVYAQKETCSEELLVEKLVLKGLQQVVLPQGGTSNQKSVGPKLVLVWGSTMYHIDDIPFST--KNLPDVYTQFRKAVESKCSIRGCFKLPVSLGP-PPNTGLDQIDGWGTIP-TLEQLGLKE--------SKASQH----EQGIHFLGGENAALGRISEYFWKKDLLRVYKETRNGMMGPDYSTKFSPWLASGSLSPRYIYEEVRRYEKQRVANDSTYWVLFELIWRDYFKFISMKHGNSIFHLGGPRNVVSK--WSQDRSLFESWRDGRTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRQLPKERRNFPG--------------QSYIKQIVPLKFGN 568
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|848917051|ref|XP_012855999.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Erythranthe guttata]) HSP 1 Score: 484.182 bits (1245), Expect = 9.281e-162 Identity = 250/515 (48.54%), Postives = 325/515 (63.11%), Query Frame = 0 Query: 76 GTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSV---LMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584 T+SD K +VW++ DLR LD+E L A + V ++C DPR FG P KTG LRA+FL E + DLKT L G N++++ GKPE +P LAK VY +E SEE+ V + V + L K ++ +WG +YH+DD+PF +P ++TQFRK+VESK+ VR+ + PPSL P+P ED G V S V+P V + F GGE+A L+R+ EYFW KDL++ YK TRNGMLG DYS+KFSPWLA+GS+SPR I+ E+++YE++R NDSTYW+ FELIWRD+FRF +I GN+ F GGP+ + W ++ AL+ AWK+G TGYPL+DANM+EL +TGFMSNRGRQ+V SFL RDMG++WR+GA WFE LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ YDPE Y+ +W P+LR +P + NP G +Y + IVPLKFG Sbjct: 73 STTSDRKGKGVAIVWFR-NDLRILDNEVLFKAWVSSEVVLPVYCIDPRLFGATHFFGFP---KTGALRAQFLTECLADLKTNLMKRGLNLLIQRGKPEQILPSLAKTYGAHTVYVQKETCSEEINVERRVSQNLQKEFVVSTKLELIWGCTMYHVDDLPFDC--TSLPDVYTQFRKSVESKSVVRRCIRVPPSLGPSP------------------------NVEDWGCVPE-TSSLGVEPIKVVKGMAFAGGESAALSRVHEYFWKKDLIRTYKVTRNGMLGSDYSTKFSPWLASGSLSPRFIYEEVKRYEKQREANDSTYWVLFELIWRDYFRFLSIKQGNSLFHAGGPR--KVQTNWSQNRALFDAWKDGRTGYPLIDANMKELSSTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPQLRALPKEKRHNP-------------GMMLYIKTIVPLKFGN 541
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|604302514|gb|EYU22090.1| (hypothetical protein MIMGU_mgv1a004481mg [Erythranthe guttata]) HSP 1 Score: 482.641 bits (1241), Expect = 9.697e-162 Identity = 250/514 (48.64%), Postives = 325/514 (63.23%), Query Frame = 0 Query: 77 TSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSV---LMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584 T+SD K +VW++ DLR LD+E L A + V ++C DPR FG P KTG LRA+FL E + DLKT L G N++++ GKPE +P LAK VY +E SEE+ V + V + L K ++ +WG +YH+DD+PF +P ++TQFRK+VESK+ VR+ + PPSL P+P ED G V S V+P V + F GGE+A L+R+ EYFW KDL++ YK TRNGMLG DYS+KFSPWLA+GS+SPR I+ E+++YE++R NDSTYW+ FELIWRD+FRF +I GN+ F GGP+ + W ++ AL+ AWK+G TGYPL+DANM+EL +TGFMSNRGRQ+V SFL RDMG++WR+GA WFE LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ YDPE Y+ +W P+LR +P + NP G +Y + IVPLKFG Sbjct: 39 TTSDRKGKGVAIVWFR-NDLRILDNEVLFKAWVSSEVVLPVYCIDPRLFGATHFFGFP---KTGALRAQFLTECLADLKTNLMKRGLNLLIQRGKPEQILPSLAKTYGAHTVYVQKETCSEEINVERRVSQNLQKEFVVSTKLELIWGCTMYHVDDLPFDC--TSLPDVYTQFRKSVESKSVVRRCIRVPPSLGPSP------------------------NVEDWGCVPE-TSSLGVEPIKVVKGMAFAGGESAALSRVHEYFWKKDLIRTYKVTRNGMLGSDYSTKFSPWLASGSLSPRFIYEEVKRYEKQREANDSTYWVLFELIWRDYFRFLSIKQGNSLFHAGGPR--KVQTNWSQNRALFDAWKDGRTGYPLIDANMKELSSTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAYWLPQLRALPKEKRHNP-------------GMMLYIKTIVPLKFGN 506
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|694997034|ref|XP_009397250.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial isoform X2 [Musa acuminata subsp. malaccensis]) HSP 1 Score: 485.337 bits (1248), Expect = 1.061e-161 Identity = 258/544 (47.43%), Postives = 343/544 (63.05%), Query Frame = 0 Query: 59 AVPRAAVASTVTMTNGE-GTSSDTSVKKCG----LVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKAT--EGKSQFRE--------LWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGG 584 AVP + V ++ G S S+K+ G ++W++ DLR +D+E L A A + V ++C DPR FG P KTG LRA+FL+E +EDLK L G N++V+ GKPE +P +A+ VYA +E SEE+ V K V +GL + +G + ++ +WG+ +YHIDD+PF +++P ++TQFRKAVESK +R P SL P PP + +++ P TLE LG + + F GGE A L R+ EYFW KDLL+ YKETRNGM+GPDYS+KFSPWLA+GS+SPR I+ E+R+YE++RV NDSTYW+ FELIWRD+F+F ++ GN+ F LGGP+ K W +D +L+ +W++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE LLDYDP SNYGNW Y AGVG+DPREDRYFS+PKQ TYDPE Y+ +W PELR +P + P + Y +QIVPLKFG Sbjct: 61 AVPGLSADEVVAASDEAFGRHSSPSLKRSGSGVAIMWFR-NDLRLMDNEALVRAWAASESVLPVYCVDPRNFGATHYFGFP---KTGALRAQFLIECLEDLKKNLMKRGLNLLVRFGKPEDILPSIARVFSAHTVYAQKETCSEELLVEKLVLKGLQQVVLPQGGTSNQKSVGPKLVLVWGSTMYHIDDIPFST--KNLPDVYTQFRKAVESKCSIRGCFKLPVSLGP-PPNTGLDQIDGWGTIP-TLEQLGLKESKH---------------EQGIHFLGGENAALGRISEYFWKKDLLRVYKETRNGMMGPDYSTKFSPWLASGSLSPRYIYEEVRRYEKQRVANDSTYWVLFELIWRDYFKFISMKHGNSIFHLGGPRNVVSK--WSQDRSLFESWRDGRTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRQLPKERRNFPG--------------QSYIKQIVPLKFGN 565
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|1150172996|ref|XP_020228573.1| (cryptochrome DASH, chloroplastic/mitochondrial [Cajanus cajan]) HSP 1 Score: 482.256 bits (1240), Expect = 1.340e-160 Identity = 259/544 (47.61%), Postives = 336/544 (61.76%), Query Frame = 0 Query: 78 SSDT--SVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKA------------TEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGGGG-GGIKGSGGKSGSKRGG 603 +SDT S K +VW++ DLR LD+E L A + V ++C DPR F P KTG LRA+FLLE + DL+ L G N++V+ GKPE +P LAKA +V VYA +E SEE+ V + V GL + + + + +WG +YH+DD+PF +P ++TQFRK VE K +R + P SL P P + E+ L S LE LG + + S + F GGETA L+R+ EYFW KDLL+ YKETRNGMLGPDYS+KFSPWLA+GS+SPR I E+++YE ER+ N STYW+ FELIWRD+FRF ++ +GN+ F LGGP+ ++ W +D L+ AW++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMG++WR+GA WFE LLDYDPCSNYGNW Y +GVG+DPREDRYFS+PKQ TYDPE Y+ +W P+LR IP + P G +Y Q+VPLKFG G K G + + RG Sbjct: 82 TSDTKRSGKGTAIVWFR-NDLRVLDNEALYKAWLYSETVLPVYCVDPRLFATTYHFGFP---KTGALRAQFLLECLADLRKNLMKKGLNLLVQHGKPEDILPSLAKAFRVHTVYAQKETCSEELNVERLVIRGLQQVVISPEESSGVTVSNNIPKLQFVWGTTMYHLDDLPFD--ATCLPDVYTQFRKIVEDKCTIRSCIKLPASLGPPP----LVEDWGCLPS---LEQLGLCSQ---------------NVSKGMKFVGGETAALSRVYEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIHEEVKRYENERLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHLGGPRK--AQHNWSQDKKLFEAWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRKIPKEKRNFP-------------GNLLYIPQVVPLKFGTASGHNKDKSYGARRTNDRGS 582
BLAST of EWM28467.1 vs. NCBI_GenBank
Match: gi|565458772|ref|XP_006287385.1| (hypothetical protein CARUB_v10000591mg [Capsella rubella] >gi|482556091|gb|EOA20283.1| hypothetical protein CARUB_v10000591mg [Capsella rubella]) HSP 1 Score: 481.1 bits (1237), Expect = 1.813e-160 Identity = 257/544 (47.24%), Postives = 336/544 (61.76%), Query Frame = 0 Query: 66 ASTVTMTNGEGTSSDTSVKKCGLVWYKCTDLRTLDHEPLSLAHAENSHVAHLFCFDPRWFGDAGGPSAPGTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDFVYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPLTLEALGFTREEDLGPVLSYASDTRVDPSSV---LMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADILLNPARFDGPVRAKFAVGEEVYPRQIVPLKFGGG-GGGGIKGSGGKSGSKRG 602 +S++ NG+G S ++W++ DLR LD++ L A + + + ++C DPR F P KTG LR FL+E + DL+ L G N++++ GKPE VP LAK V+AH+E SEEV V + V +GL G ++ +WG+ +YH DD+PF L D+P ++TQFRK+VE+K +R P SL P P + + +LE LG ++P V + F GGE+AGL+R+ EYFW KDLL+ YKETRNGMLGPDYS+KFSPWLA G ISPR+I+ E+++YE+ERV N+STYW+ FELIWRD+FRF +I GN+ F LGGP+ K W +D L+ +W++G TGYPL+DANM+EL TTGFMSNRGRQ+V SFL RDMGL+WR+GA WFE LLDYDPCSNYGNW Y AGVG+DPREDRYFS+PKQ YDPE Y+ W +LR +P + P R +Y +VPLK G G GG K GG GS G Sbjct: 71 SSSLMKRNGKGVS---------IIWFR-NDLRVLDNDALYKAWSSSETLLPVYCLDPRLFHTTHFFDFP---KTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEDIVPSLAKDFGAHTVFAHKETCSEEVDVERLVNQGLKGVGNGTTKLELVWGSTMYHKDDLPFDVL--DLPDVYTQFRKSVEAKCSIRSSTRVPLSLGPTP-------SVDNWGDVPSLEQLG------------------IEPQEVTRGMRFVGGESAGLSRVFEYFWKKDLLKVYKETRNGMLGPDYSTKFSPWLAFGCISPRIIYEEVQRYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGK--WSQDKRLFESWRDGKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRL-------------MYIDTVVPLKHGNGPMAGGSKSGGGFRGSHSG 559 The following BLAST results are available for this feature:
BLAST of EWM28467.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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