EWM28512.1, cds2153 (CDS) Nannochloropsis gaditana

Overview
NameEWM28512.1
Unique Namecds2153
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1030846..1031034 +
Alignment locationCM002458.1:1031228..1031830 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28512.1
Productlipocalin protein
Orig transcript idgnl|cribi|Naga_100131g14.7457.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1030846..1031034 +
CM002458.1supercontigCM002458.1:1031228..1031830 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011038Calycin-like
IPR012674Calycin
IPR000566Lipocln_cytosolic_FA-bd_dom
Homology
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|585110929|gb|EWM28512.1| (lipocalin protein [Nannochloropsis gaditana])

HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query:    1 MRCNYKACGLGLLAAVLLTGFPASEAVETLHELSGFRQTPSWPGPIPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDPLFSGFLRKPRLTVQGAECLYSPEPSPSNLTVEGAEGKGNTHDEAALASEDEDEMAASVARLRKDVRSGRPQKH 263
            MRCNYKACGLGLLAAVLLTGFPASEAVETLHELSGFRQTPSWPGPIPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDPLFSGFLRKPRLTVQGAECLYSPEPSPSNLTVEGAEGKGNTHDEAALASEDEDEMAASVARLRKDVRSGRPQKH
Sbjct:    1 MRCNYKACGLGLLAAVLLTGFPASEAVETLHELSGFRQTPSWPGPIPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDPLFSGFLRKPRLTVQGAECLYSPEPSPSNLTVEGAEGKGNTHDEAALASEDEDEMAASVARLRKDVRSGRPQKH 263          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|72012821|ref|XP_782410.1| (PREDICTED: apolipoprotein D [Strongylocentrotus purpuratus])

HSP 1 Score: 157.147 bits (396), Expect = 4.188e-44
Identity = 87/181 (48.07%), Postives = 111/181 (61.33%), Query Frame = 0
Query:   32 ELSGFRQTPSWPGPIPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEE-VKEFV-DPLFSGFLRKPRLTVQGAECLY 210
             L  F +  S  G    V+E+D++AY GRW+QVYT+ +V  TFE    CVTADYGL  +GT ISV NA     P+G    I G A   +AS+PGKLTV F  +P PG YWI+KLGP+  G YQYSVV+D+   TLF+LARD   F    E+E V EF+ +  F  F  +P+ T Q  +C Y
Sbjct:   23 RLGSFFRGDSCFGAPETVNELDVQAYLGRWYQVYTDLVVNVTFERNAKCVTADYGLNADGT-ISVFNANTVGTPDGDFNTITGTATVPDASQPGKLTVQFPGVPVPGDYWILKLGPVVGGQYQYSVVSDSNKATLFVLARDASAFMGSDEKETVLEFLRESGFKCFWNRPQETYQSDQCNY 202          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|1207914365|ref|XP_021345891.1| (apolipoprotein D-like [Mizuhopecten yessoensis] >gi|1205907512|gb|OWF54090.1| Apolipoprotein D [Mizuhopecten yessoensis])

HSP 1 Score: 155.606 bits (392), Expect = 1.432e-43
Identity = 81/170 (47.65%), Postives = 106/170 (62.35%), Query Frame = 0
Query:   46 IPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTG-ISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPI---EDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDPL-FSGFLRKPRLTVQGAECLY 210
            I  V+E+D+  Y GRW+Q+Y +  V  TFE   +CVTADY +  +G+G + V N +    PNGT   ING   A  +S+PGKLTVN +  PFP  YW+IKLGP     D  YQYSVVTD   +TLF+LARDP TF   Y +EV +F+    F+  L  P  T QG++C+Y
Sbjct:   28 IKTVTELDVPKYLGRWYQMYASESVVATFEKDALCVTADYSMSTDGSGKVIVRNGETLKTPNGTFKTING--YATTSSDPGKLTVNLETAPFPAPYWVIKLGPATFGNDTQYQYSVVTDNLKVTLFVLARDPETFKRDYNDEVVQFLKQQGFTNLLNSPVATYQGSDCMY 195          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|156372461|ref|XP_001629056.1| (predicted protein [Nematostella vectensis] >gi|156216047|gb|EDO36993.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 155.221 bits (391), Expect = 1.890e-43
Identity = 76/170 (44.71%), Postives = 110/170 (64.71%), Query Frame = 0
Query:   46 IPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFV-DPLFSGFLRKPRLTVQGAECLYSPEP 214
            I  V  +++ +Y GRW+Q+Y++F+V+ TFE   VCVTADY L  +G  I V N+    +P+G    I G A   +   PGKL V+FD +P  GSYWI+KLGP+  G YQYS+VTD    TLF+L+RDP  + + Y++E++EF+ +  F+    KPR T Q  +C Y+P+P
Sbjct:   19 IDTVPTLNVTSYLGRWYQMYSDFIVEETFERNAVCVTADYTLRKDGK-IGVVNSNRDKKPDGELKQITGYAYQPDPEVPGKLKVHFDTVPVEGSYWILKLGPVSGGQYQYSIVTDGLKATLFVLSRDPNNY-EKYDKEIQEFLKNNGFTHLWNKPRKTYQSEDCKYAPKP 186          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|156372405|ref|XP_001629028.1| (predicted protein [Nematostella vectensis] >gi|156216019|gb|EDO36965.1| predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 150.214 bits (378), Expect = 5.863e-42
Identity = 72/164 (43.90%), Postives = 102/164 (62.20%), Query Frame = 0
Query:   48 AVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFV-DPLFSGFLRKPRLTVQGAECLY 210
             V  ++I +Y GRW+Q+Y + +V  T+E   VC TADY L  +G  I VHN+     P+G    I+G A   +   PGK  ++FD++P  GSYW++KLGP+ DG YQYS+VTD+  + LFIL+RDP T++  Y +EV  F  +  F+ F  KPR T Q  +C Y
Sbjct:    2 TVPALNITSYAGRWYQMYADLIVDETYERNSVCTTADYTLRKDGK-IGVHNSGRVKTPDGEVKAISGYAYRKDPKVPGKFVLHFDSVPVDGSYWVVKLGPVSDGQYQYSIVTDSTTLQLFILSRDPSTYSK-YNDEVMAFCKENGFTHFWNKPRKTYQSEDCKY 163          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|1191043781|ref|XP_020899403.1| (temperature-induced lipocalin-1-like [Exaiptasia pallida])

HSP 1 Score: 145.976 bits (367), Expect = 9.333e-40
Identity = 78/172 (45.35%), Postives = 103/172 (59.88%), Query Frame = 0
Query:   45 PIPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPI---EDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDPL-FSGFLRKPRLTVQGAECLYSP 212
            P+PA   ++I  Y GRW+Q+Y + +V  TFE  GVC TADY L  +G  + V N+Q    P G  + I G A A +  EPGK  ++FD +P  G YWIIKLGP    ED  YQYSVVTD   + +++LARDP  F + Y+EE+K F+    F  F  KP  T+Q  +C Y P
Sbjct:   21 PVPA---LNITRYLGRWYQMYADKIVMSTFEKDGVCGTADYXLRKDGK-LGVLNSQRIKTPTGELSQITGYAYAPDPKEPGKFKLHFDVVPVDGDYWIIKLGPPSFGEDKKYQYSVVTDRLHLQMYVLARDPQAFKNEYDEEIKTFLTTNGFDHFWNKPIATLQSKDCEYVP 188          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|72169536|ref|XP_794433.1| (PREDICTED: uncharacterized protein LOC589705 [Strongylocentrotus purpuratus])

HSP 1 Score: 145.591 bits (366), Expect = 1.054e-39
Identity = 85/171 (49.71%), Postives = 109/171 (63.74%), Query Frame = 0
Query:   49 VSEIDIEAYTGRWFQVYTNF---LVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAI-TLFILARDPGTFADLYEEEVKEFVDPL--FSGFLRKPRLTVQGAECLYSPE 213
            V E+  EAY GRW+QVYTNF   L    FE    CVTADYGLL N T +SV+NA    + N T  I +G A  ++ S+PGKL V  D +P  G YWI KLGPI +G YQYS++TD  A   LF+LARDP  FA+LY++EV E++ PL  F+G  ++P      A+C+Y P 
Sbjct:   24 VPELQAEAYIGRWYQVYTNFWADLFSNIFEPD--CVTADYGLL-NSTYVSVYNANWRFDENRTDDI-SGYAYIVDVSDPGKLKVVLDGVPVEGDYWIFKLGPIVEGQYQYSLITDGEAARQLFVLARDPAEFAELYDKEVMEYL-PLQGFTGERKQPYAITHNADCVYPPR 189          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|1005472368|ref|XP_015773049.1| (PREDICTED: outer membrane lipoprotein Blc-like [Acropora digitifera])

HSP 1 Score: 142.124 bits (357), Expect = 1.960e-38
Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 0
Query:   46 IPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGP---IEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFV-DPLFSGFLRKPRLTVQGAECLYS 211
            I  VS +++  Y GRW+Q+Y + +V  TFE   VCVTADY L  +   I V N++    P G    I G A   +   PGKL V+ D +P    YW++KLGP    +  +YQYSV+TD + +TLF+LARD  TF   Y+EEVKE++ +  FS    KP  T+Q  EC+YS
Sbjct:   21 IDTVSSLNVTKYLGRWYQIYADAVVTSTFERDAVCVTADYTLRKD-EKIGVLNSERLKTPKGKGKNITGYAYVPDPKYPGKLKVHLDGVPIDAQYWVVKLGPPSFSDQHLYQYSVITDGFQVTLFVLARDVNTFKSRYDEEVKEWLKENGFSHVYNKPIATLQSDECIYS 189          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|1191043779|ref|XP_020899402.1| (temperature-induced lipocalin-1-like [Exaiptasia pallida] >gi|999975778|gb|KXJ14952.1| Outer membrane lipoprotein Blc [Exaiptasia pallida])

HSP 1 Score: 142.51 bits (358), Expect = 2.100e-38
Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 0
Query:   46 IPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPI---EDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDPL-FSGFLRKPRLTVQGAECLYSPEPSPSNLTVE 222
            I  V  ++I  Y GRW+Q+Y + +V  TFE  GVC+TADY +  +   I V N+Q    P G  + I G A   +  EPGKL V+FD  P  G YW+IKLGP    ED  YQYSVVTD   +TLF+LARDP  F + Y++EV  F++   F  F  KP   +Q  +C Y+ + +    T E
Sbjct:   21 IDTVXALNITRYLGRWYQMYGDKIVMSTFEKNGVCITADYTVRKD-EKIGVLNSQRIKTPTGNLSQITGYAYVPDPKEPGKLKVHFDVSPVDGDYWVIKLGPQSFGEDKKYQYSVVTDRLGLTLFVLARDPQAFKNDYDKEVITFLNEKGFDHFWDKPIAILQSNKCQYAHQKTSLYKTTE 200          
BLAST of EWM28512.1 vs. NCBI_GenBank
Match: gi|919081849|ref|XP_013421978.1| (PREDICTED: outer membrane lipoprotein Blc-like [Lingula anatina])

HSP 1 Score: 132.494 bits (332), Expect = 1.429e-34
Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 0
Query:   46 IPAVSEIDIEAYTGRWFQVYTNFLVQYTFELGGVCVTADYGLLPNGTGISVHNAQNFLEPNGTTTIINGNAMAMNASEPGKLTVNFDAIPFPGSYWIIKLGPIEDGVYQYSVVTDAYAITLFILARDPGTFADLYEEEVKEFVDP-LFSGFLRKPRLTVQGAECLYSPEPS 215
            I  VS+ID+  YTGRW+QVY +      F   G CVTA YG   N T I+V N+     P G    I G+A A    E GK  +N   +PF G+YW+IKLGP+ +G YQYSVV+D   + L++LARDP TF   Y+ EVKEF++   ++ +L +P  +    +C+Y P P+
Sbjct:   28 IATVSQIDVNKYTGRWYQVYLSRWSS-IFAPKGYCVTATYGKF-NDTTITVFNSGRKGGPTGEEQAIRGHAYA--TEESGKFKLNLAGVPFTGNYWVIKLGPVINGQYQYSVVSDTNRLGLYVLARDPETFKK-YDAEVKEFLNKNHYNEWLNEPLPSYHDKDCIYPPMPT 193          
The following BLAST results are available for this feature:
BLAST of EWM28512.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110929|gb|EWM28512.1|0.000e+0100.00lipocalin protein [Nannochloropsis gaditana][more]
gi|72012821|ref|XP_782410.1|4.188e-4448.07PREDICTED: apolipoprotein D [Strongylocentrotus pu... [more]
gi|1207914365|ref|XP_021345891.1|1.432e-4347.65apolipoprotein D-like [Mizuhopecten yessoensis] >g... [more]
gi|156372461|ref|XP_001629056.1|1.890e-4344.71predicted protein [Nematostella vectensis] >gi|156... [more]
gi|156372405|ref|XP_001629028.1|5.863e-4243.90predicted protein [Nematostella vectensis] >gi|156... [more]
gi|1191043781|ref|XP_020899403.1|9.333e-4045.35temperature-induced lipocalin-1-like [Exaiptasia p... [more]
gi|72169536|ref|XP_794433.1|1.054e-3949.71PREDICTED: uncharacterized protein LOC589705 [Stro... [more]
gi|1005472368|ref|XP_015773049.1|1.960e-3843.53PREDICTED: outer membrane lipoprotein Blc-like [Ac... [more]
gi|1191043779|ref|XP_020899402.1|2.100e-3843.09temperature-induced lipocalin-1-like [Exaiptasia p... [more]
gi|919081849|ref|XP_013421978.1|1.429e-3443.27PREDICTED: outer membrane lipoprotein Blc-like [Li... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2161rna2161Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications