EWM28521.1, cds2151 (CDS) Nannochloropsis gaditana

Overview
NameEWM28521.1
Unique Namecds2151
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1025638..1026795 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28521.1
Productxpa-binding protein 1
Orig transcript idgnl|cribi|Naga_100131g16.7466.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1025638..1026795 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR030230Gpn1/Npa3/XAB1
IPR004130Gpn
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|585110938|gb|EWM28521.1| (xpa-binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 791.186 bits (2042), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MRGGNCISSFISQHFTSSLAAPIIPSKDTTGMQSGSSGVRPNESPPSCTDEPPTSPPPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGEGGGGEGEGGEGEGGKQVEGKKKRKDDEREEK 385
            MRGGNCISSFISQHFTSSLAAPIIPSKDTTGMQSGSSGVRPNESPPSCTDEPPTSPPPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGEGGGGEGEGGEGEGGKQVEGKKKRKDDEREEK
Sbjct:    1 MRGGNCISSFISQHFTSSLAAPIIPSKDTTGMQSGSSGVRPNESPPSCTDEPPTSPPPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGEGGGGEGEGGEGEGGKQVEGKKKRKDDEREEK 385          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|299116225|emb|CBN74574.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 411.379 bits (1056), Expect = 6.758e-139
Identity = 200/297 (67.34%), Postives = 236/297 (79.46%), Query Frame = 0
Query:   60 RKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAES-VREEDGRRG-------KEMARLMKDLRM 348
            +KKP+V + MGMAGSGKTTL+QRLNL    +G KSY++NLDPAVK VPF A+IDIRDTVNYKEVM QY LGPNGAI TSLNLFATRFDQVL +LEKR+ DLEYV +DTPGQIEVFTWSASG IITE LAS+FPT LVYVVDTPRT++PTTFMSNMLYACS+LYK+RLP+VL  NK+DILS  FA++WM DFEK QE LD  G D  YM++L RS++LVLDEFY  L  VGVSAASGDG+   F+A+D AA EF RDYLPD+  R  E+  R+E  ++        + M +LM D+ +
Sbjct:   49 KKKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSG-DESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFKALDNAALEFERDYLPDLQRRIKEAKARQEAAKQASLPHPPKRSMEKLMTDIAI 344          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|1098837984|ref|XP_018825639.1| (PREDICTED: GPN-loop GTPase 1-like [Juglans regia] >gi|1098837986|ref|XP_018825640.1| PREDICTED: GPN-loop GTPase 1-like [Juglans regia] >gi|1098837988|ref|XP_018825641.1| PREDICTED: GPN-loop GTPase 1-like [Juglans regia])

HSP 1 Score: 404.06 bits (1037), Expect = 3.617e-136
Identity = 189/308 (61.36%), Postives = 236/308 (76.62%), Query Frame = 0
Query:   47 SCTDEPPTSPPPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGE 354
            S + +  TSP  F+KKP++++ +GMAGSGKTT + RL     +   + Y +NLDPAV ++P+ ANIDIRDTV YKEVMKQ+ LGPNG I+TSLNLFAT+FD+V+S++E RA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR+SSP TFMSNMLYACSILYKTRLP+VL FNKTD+  H FA++WMEDFE FQ  +     D  Y STL +S+ LVLDEFYK LR VGVSA SG G++ FF+A++ +AEE+   Y  D+  R+AE  R E+ RR + M +L KD  ME  RGE
Sbjct:   54 SSSGQAGTSPANFKKKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVLNLDPAVMTLPYGANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSVIESRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSSSPVTFMSNMLYACSILYKTRLPVVLAFNKTDVAQHQFALEWMEDFEAFQTAV---SSDQSYTSTLSQSLCLVLDEFYKNLRSVGVSAVSGAGMEAFFKAIEASAEEYMETYRADLDKRRAEKQRLEEERRKENMDKLRKD--MEQSRGE 356          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|661887807|emb|CDP08540.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 401.364 bits (1030), Expect = 2.280e-135
Identity = 187/298 (62.75%), Postives = 233/298 (78.19%), Query Frame = 0
Query:   57 PPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGE 354
            P F++KP++++ +GMAGSGKTT + RL         + Y +NLDPAV S+P+ ANIDIRDTV YKEVMK++ LGPNG I+TSLNLF+T+FD+V+S++EKRA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR++SP TFMSNMLYACSILYKTRLP+VL FNKTD+  H FA++WMEDFE F   LD    D  Y STL RS+SL L+EFYK LR VGVSA SG G+D FF+A++ +AEE+  +Y PD+  R+AE  + E+ RR + M RL KD  ME  RGE
Sbjct:   45 PSFKRKPVIIIVVGMAGSGKTTFMHRLVCHTMGSNVRGYVINLDPAVMSLPYGANIDIRDTVRYKEVMKEFNLGPNGGILTSLNLFSTKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSTSPATFMSNMLYACSILYKTRLPLVLAFNKTDVAQHQFALEWMEDFEVFHAALD---SDHSYTSTLTRSLSLALEEFYKNLRSVGVSAVSGAGMDAFFKAIEASAEEYMENYKPDLDRRRAEKQQLEEQRRRENMDRLRKD--MEKSRGE 337          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|255542247|ref|XP_002512187.1| (PREDICTED: GPN-loop GTPase 1 [Ricinus communis] >gi|1000981351|ref|XP_015584612.1| PREDICTED: GPN-loop GTPase 1 [Ricinus communis] >gi|1000981353|ref|XP_015584613.1| PREDICTED: GPN-loop GTPase 1 [Ricinus communis] >gi|223548731|gb|EEF50221.1| xpa-binding protein, putative [Ricinus communis])

HSP 1 Score: 400.593 bits (1028), Expect = 5.979e-135
Identity = 190/308 (61.69%), Postives = 238/308 (77.27%), Query Frame = 0
Query:   47 SCTDEPPTSPPPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGE 354
            S +++  +S   F++KP+V++ +GMAGSGKTT + RL     +   + Y +NLDPAV ++PF ANIDIRDTV YKEVMKQ+ LGPNG I+TSLNLFAT+FD+V+S++EKRA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR+SSPTTFMSNMLYACSILYKTRLP+VL FNKTD+  H FA++WMEDFE FQ  +     D  Y STL +S+SLVLDEFYK L+ VGVSA SG G++ FF+AV+ +AEE+   Y  ++  R+ E  R ED RR + M RL KD  ME  +GE
Sbjct:   47 SPSEQAGSSSITFKRKPVVIIVVGMAGSGKTTFLHRLISHTQATNIRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKQFNLGPNGGILTSLNLFATKFDEVVSVIEKRANQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVVDTPRSSSPTTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHQFALEWMEDFEAFQAAV---SSDHSYSSTLTQSLSLVLDEFYKNLKSVGVSAVSGAGMEAFFKAVEASAEEYMETYKAELDKRREEKQRLEDERRRESMERLRKD--MEKSKGE 349          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|743783507|ref|XP_010921431.1| (PREDICTED: GPN-loop GTPase 1 isoform X1 [Elaeis guineensis])

HSP 1 Score: 399.823 bits (1026), Expect = 8.642e-135
Identity = 187/296 (63.18%), Postives = 231/296 (78.04%), Query Frame = 0
Query:   59 FRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGE 354
            FR+KP++++ +GMAGSGKTT + RL     S   + Y +NLDPAV ++PF ANIDIRDTV YKEVMK+Y LGPNG I+TSLNLF+T+FD+V+S++EKRA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR+++P TFMSNMLYACSILYKTRLP+VL FNK D+  H FA++WMEDFE FQ  LD    D  Y STL RS+SLVLDEFYK+LR VGVSA SG G+D FF A++E+A E+  +Y  D+  R+AE  R E  RR   M +L KD  ME  +G+
Sbjct:   49 FRRKPVIIIVVGMAGSGKTTFLHRLVCHTQSSNIRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKEYNLGPNGGILTSLNLFSTKFDEVISVVEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTIIAYVVDTPRSANPVTFMSNMLYACSILYKTRLPLVLVFNKVDVAKHEFALEWMEDFEAFQTALD---TDTSYTSTLTRSLSLVLDEFYKSLRSVGVSAVSGAGMDAFFNAIEESAREYMENYKADLDKRRAEKERLEAERRRANMEKLRKD--MEKTKGQ 339          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|1183493984|gb|ORZ17650.1| (hypothetical protein BCR42DRAFT_325798 [Absidia repens])

HSP 1 Score: 395.201 bits (1014), Expect = 3.153e-134
Identity = 190/315 (60.32%), Postives = 243/315 (77.14%), Query Frame = 0
Query:   54 TSPPP----FRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGEGGGGEGEGGE 364
            T+P P     +K+P  +L +GMAGSGKTT +QR+N  L+S+ T  Y +NLDPAV ++PF ANIDIRDTVNYKEVMKQY LGPNG I+TSLNLF T+FDQVL+ +EKRA  + ++LVDTPGQIE+FTWSASGAIIT+ LA+++PT++ Y++DTPRT+SP TFMSNMLYACSILYKT+LP +L FNKTD++SH FAV+WM DFEKFQ+ L R   D  YMS+L+ SMSLVLDEFY+ L+ VGVSA +G GID FF AVDEAA+E+ ++Y P++       V +E+  R +++ RLMKD+    E  +G     E GE
Sbjct:    4 TTPTPESSSTKKQPPTILCIGMAGSGKTTFMQRINAHLHSKKTPPYVLNLDPAVGNLPFTANIDIRDTVNYKEVMKQYNLGPNGGILTSLNLFTTKFDQVLNFVEKRADSVSHILVDTPGQIEIFTWSASGAIITDTLAATYPTVIAYIIDTPRTTSPATFMSNMLYACSILYKTKLPFILVFNKTDVVSHDFAVEWMTDFEKFQDALRR---DTSYMSSLMNSMSLVLDEFYQHLKVVGVSAVTGQGIDEFFTAVDEAADEYEKEYKPEIERMIRIKVGKEEKERQEQLNRLMKDV----EVSKGAEVSLEKGE 311          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|1117390353|ref|XP_019463276.1| (PREDICTED: GPN-loop GTPase 1 [Lupinus angustifolius])

HSP 1 Score: 398.667 bits (1023), Expect = 4.246e-134
Identity = 184/302 (60.93%), Postives = 234/302 (77.48%), Query Frame = 0
Query:   58 PFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGEGGGGE 359
            PF++KP++++ +GMAGSGKTTL+ RL    + +  + Y +NLDPAV ++PFA+NIDIRDTV YKEVMKQ+ LGPNG IMTSLNLFAT+FD+V+S++EKRA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR  +PTTFMSNMLYACSILYKTRLP++L FNK D+  H FA++WMEDFE FQ  +     D  Y STL +S+SL LDEFYK LR VGVSA SG GID FF+AV+ +AE++  +Y  D+  R+ E +R E+ R+ + M +L +D+       E  GGE
Sbjct:   55 PFKRKPVIIIVVGMAGSGKTTLLHRLVAHTHQKNIRGYVMNLDPAVMTLPFASNIDIRDTVKYKEVMKQFNLGPNGGIMTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRAENPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHEFALEWMEDFEAFQAAV---SSDQSYTSTLTQSLSLALDEFYKNLRSVGVSAVSGAGIDAFFKAVETSAEDYMENYKADLDKRREEKLRLEEDRKRESMDKLRRDM-------EKSGGE 346          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|1137177329|gb|OMO54772.1| (hypothetical protein CCACVL1_27597 [Corchorus capsularis])

HSP 1 Score: 398.282 bits (1022), Expect = 4.480e-134
Identity = 186/301 (61.79%), Postives = 234/301 (77.74%), Query Frame = 0
Query:   54 TSPPPFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEGERGE 354
            +S   F++KP++++ +GMAGSGKTT + RL     +   + Y +NLDPAV ++PF ANIDIRDTV YKEVMKQ+ LGPNG I+TSLNLFAT+FD+V+S++EKRA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR++SP TFMSNMLYACSILYKTRLP+VL FNKTD+  H FA++WMEDFE FQ  +     D  Y STL +S+SL LDEFYK LR VGVSA SG G++ FF+A++ +AEE+  +Y  D+  R+AE  R E+ RR + M +L KD  ME  RGE
Sbjct:   52 SSSSDFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQASNIRGYVMNLDPAVMTLPFGANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSASPVTFMSNMLYACSILYKTRLPLVLAFNKTDVAQHQFALEWMEDFEAFQAAI---SSDTSYTSTLTQSLSLSLDEFYKNLRSVGVSAISGAGMNEFFKAIEASAEEYMENYKADLDKRRAEKQRLEEERRKENMDKLRKD--MEQSRGE 347          
BLAST of EWM28521.1 vs. NCBI_GenBank
Match: gi|1102700910|gb|OIW00157.1| (hypothetical protein TanjilG_29147 [Lupinus angustifolius])

HSP 1 Score: 396.356 bits (1017), Expect = 7.557e-134
Identity = 181/293 (61.77%), Postives = 231/293 (78.84%), Query Frame = 0
Query:   58 PFRKKPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFRAVDEAAEEFARDYLPDMLARKAESVREEDGRRGKEMARLMKDLRMEG 350
            PF++KP++++ +GMAGSGKTTL+ RL    + +  + Y +NLDPAV ++PFA+NIDIRDTV YKEVMKQ+ LGPNG IMTSLNLFAT+FD+V+S++EKRA  L+YVLVDTPGQIE+FTWSASGAIITEA AS+FPT++ YVVDTPR  +PTTFMSNMLYACSILYKTRLP++L FNK D+  H FA++WMEDFE FQ  +     D  Y STL +S+SL LDEFYK LR VGVSA SG GID FF+AV+ +AE++  +Y  D+  R+ E +R E+ R+ + M +L +D+   G
Sbjct:   17 PFKRKPVIIIVVGMAGSGKTTLLHRLVAHTHQKNIRGYVMNLDPAVMTLPFASNIDIRDTVKYKEVMKQFNLGPNGGIMTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRAENPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHEFALEWMEDFEAFQAAV---SSDQSYTSTLTQSLSLALDEFYKNLRSVGVSAVSGAGIDAFFKAVETSAEDYMENYKADLDKRREEKLRLEEDRKRESMDKLRRDMEKSG 306          
The following BLAST results are available for this feature:
BLAST of EWM28521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110938|gb|EWM28521.1|0.000e+0100.00xpa-binding protein 1 [Nannochloropsis gaditana][more]
gi|299116225|emb|CBN74574.1|6.758e-13967.34conserved unknown protein [Ectocarpus siliculosus][more]
gi|1098837984|ref|XP_018825639.1|3.617e-13661.36PREDICTED: GPN-loop GTPase 1-like [Juglans regia] ... [more]
gi|661887807|emb|CDP08540.1|2.280e-13562.75unnamed protein product [Coffea canephora][more]
gi|255542247|ref|XP_002512187.1|5.979e-13561.69PREDICTED: GPN-loop GTPase 1 [Ricinus communis] >g... [more]
gi|743783507|ref|XP_010921431.1|8.642e-13563.18PREDICTED: GPN-loop GTPase 1 isoform X1 [Elaeis gu... [more]
gi|1183493984|gb|ORZ17650.1|3.153e-13460.32hypothetical protein BCR42DRAFT_325798 [Absidia re... [more]
gi|1117390353|ref|XP_019463276.1|4.246e-13460.93PREDICTED: GPN-loop GTPase 1 [Lupinus angustifoliu... [more]
gi|1137177329|gb|OMO54772.1|4.480e-13461.79hypothetical protein CCACVL1_27597 [Corchorus caps... [more]
gi|1102700910|gb|OIW00157.1|7.557e-13461.77hypothetical protein TanjilG_29147 [Lupinus angust... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2159rna2159Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications