EWM28564.1, cds2149 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|585110982|gb|EWM28564.1| (Protein of unknown function DUF3321 [Nannochloropsis gaditana]) HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0 Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0 Query: 1 MGRKRKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 273 MGRKRKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL Sbjct: 1 MGRKRKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 273
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|553179670|ref|XP_005852741.1| (hypothetical protein NGA_0720900, partial [Nannochloropsis gaditana CCMP526] >gi|422295791|gb|EKU23090.1| hypothetical protein NGA_0720900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 Query: 17 RKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 273 RKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL Sbjct: 2 RKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 258
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|813133608|ref|XP_012197877.1| (hypothetical protein SPRG_03893 [Saprolegnia parasitica CBS 223.65] >gi|641537425|gb|KDO31278.1| hypothetical protein SPRG_03893 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 196.438 bits (498), Expect = 1.856e-58 Identity = 108/232 (46.55%), Postives = 148/232 (63.79%), Query Frame = 0 Query: 12 PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243 P VKSR+RAR+I T+FH+V L L++ + + +A ++ L++ L+ LGGR YQ AS LS SFH TSKWV + L G+ + P L +LEVGAI T LL CP + AIDL++RHA+IQQ+DFF +P TFDV+V+SM+IN +PT RG+ L+R +L+ G+ FL+LP CLT+S YMTV F +++ TRVGF + E+K TPK F LR Sbjct: 18 PPVKSRRRAREITTEFHRVTHELNRLQDATKDD--EAKARQAELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFGLRPGKKQPPLE---------VLEVGAINTQLLVCPWLNVQAIDLIARHAKIQQLDFFDVPF--TKTFDVVVSSMVINCVPTPEKRGEMLQRTWRHLK-DDGHFFLMLPLLCLTNSNYMTVDHFEAIL-TRVGFEIREKKETPKIAFFCLR 234
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|669155764|ref|XP_008613444.1| (hypothetical protein SDRG_09299 [Saprolegnia diclina VS20] >gi|530735079|gb|EQC33321.1| hypothetical protein SDRG_09299 [Saprolegnia diclina VS20]) HSP 1 Score: 195.282 bits (495), Expect = 5.136e-58 Identity = 111/232 (47.84%), Postives = 148/232 (63.79%), Query Frame = 0 Query: 12 PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243 P VKSR+RAR+I T+FH+V L L+ DA + V K H + L++ L+ LGGR YQ AS LS SFH TSKWV + L G+ + P L +LEVGAI T LL CP + AIDL++RHA+IQQ+DFF +P TFDV+V+SM+IN +PT RG+ L+R +L+ G+ FL+LP CLT+S +MTV F +++ TRVGF + E+K TPK F LR Sbjct: 18 PPVKSRRRAREITTEFHRVTHELNRLQ-DAAKDEVAKARH-AELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFGLRPGKKQPPLD---------VLEVGAINTQLLVCPWLNVQAIDLIARHAKIQQLDFFDVPF--TKTFDVVVSSMVINCVPTPEKRGEMLQRTWRHLK-DDGHFFLMLPLLCLTNSNHMTVDHFEAIL-TRVGFEIREKKETPKIAFFCLR 234
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|1173960729|gb|OQS06828.1| (hypothetical protein THRCLA_01144 [Thraustotheca clavata]) HSP 1 Score: 189.889 bits (481), Expect = 4.878e-51 Identity = 108/239 (45.19%), Postives = 144/239 (60.25%), Query Frame = 0 Query: 5 RKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243 RK P +KSR+RAR I T+FH+V L L+ L D +A + L++ L+ LGGR YQ AS LS SFH TSKWV + L G+ + P LS +LEVGAI T LL CP + AIDL++RH RIQQID+F P TFDV+V+SM+IN +PT RGD L+R +L + G+ FL+LP CLT+S YMTV +F +V +GF + E+K +PK + L+ Sbjct: 10 RKVPVGPPPIKSRRRARAITTEFHRVTHELTKLQ---GLKDEDAKARQVELEQRLQNLGGRQVYQDASILSTSFHKTSKWVFSLLTKFGLRPAKKQPPLS---------VLEVGAINTQLLVCPWLDVQAIDLIARHPRIQQIDYFDYPF--TKTFDVVVSSMVINCVPTHEKRGDMLQRTWRHLNPN-GHFFLMLPLLCLTNSNYMTVERFEEIV-KYIGFDIREKKESPKIAFYCLQ 232
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|1173948059|gb|OQR96217.1| (hypothetical protein ACHHYP_16580 [Achlya hypogyna]) HSP 1 Score: 174.866 bits (442), Expect = 5.277e-50 Identity = 104/241 (43.15%), Postives = 142/241 (58.92%), Query Frame = 0 Query: 12 PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHR-SRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASAR--------GDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243 P VKSR+RAR+I T+FH+V L L+E +K+A R + L++ L+ LGGR YQ AS LS SFH TSKWV + L + + P L +LEVGAI T LL CP + AIDL++RH +I+Q+DFF LP TFDV+V+SM+IN +PT R G+ L+ +L G+ FL+LP CLT+S +MTV F + V R+GF + E+K +PK F L+ Sbjct: 17 PPVKSRRRAREITTEFHRVTHELNRLQESK-----EKDATRQAELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFDLRPKKKQPPLE---------VLEVGAINTQLLVCPWLNVDAIDLIARHPKIRQLDFFDLPF--TKTFDVVVSSMVINCVPTPEKRGSVPMAISGEMLQSTWRHLNEG-GHFFLMLPLLCLTNSNFMTVEHFEA-VLVRIGFEIREKKDSPKIAFFCLK 239
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|673017164|ref|XP_008862543.1| (hypothetical protein H310_01260 [Aphanomyces invadans] >gi|574481746|gb|ETW08738.1| hypothetical protein H310_01260 [Aphanomyces invadans]) HSP 1 Score: 164.081 bits (414), Expect = 7.159e-46 Identity = 101/242 (41.74%), Postives = 139/242 (57.44%), Query Frame = 0 Query: 2 GRKRKAQPVV---PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAF 240 G+K K + V P VKSR+RAR++ T+FH+V L L D L+ L+ +GGR AYQ AS LS + TS+WV L L P++ + ++LEVGAI T L+ CP + AIDL+SRH +IQQ+DFF L FDV+V+SM+IN +PT RG+ L+R +L G+ FL+LP CLT+S +MTV F LV ++GF + E+K TPK +AF Sbjct: 5 GKKSKVRKVPIGPPPVKSRRRARELTTEFHRVTHELQRLTAIKGKKDADTVQRIQELELRLKDMGGREAYQDASILSTNLFKTSRWVFQLLTKF---------ELRPAKKMPQLQVLEVGAINTQLVVCPWLNVLAIDLISRHPKIQQMDFFDLDLA--RRFDVVVSSMVINCVPTPEKRGEMLQRTWTHLNDG-GHFFLMLPLLCLTNSTFMTVDHFEKLV-QQLGFVLREKKETPK-IAF 232
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|635361044|emb|CCI10718.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 164.081 bits (414), Expect = 1.094e-45 Identity = 95/226 (42.04%), Postives = 129/226 (57.08%), Query Frame = 0 Query: 15 KSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAF 240 KSR++AR+I T FH++N L EE N+ +K R++ + +GG AYQ AS LS FH TSKWV L + PS +LEVGAI T LL CP + AIDL S H RI+Q DFF L P F V+V+SM++N +P A +RG L H +L+ S G+LF+++P +CL +SKYMT F S++ +GF V+E K +PK F Sbjct: 29 KSRRKARQITTVFHRLNKDLKEAEESMAPNVREKREEVERIKSKIREIGGHEAYQQASILSTKFHRTSKWVFQIL---------TNHHRRPSSGEVPLSVLEVGAINTQLLSCPWLDVRAIDLNSMHDRIEQRDFFTL--DPAGDFHVVVSSMVLNCVPDAQSRGRMLELYHKHLKPS-GFLFVMIPLTCLHNSKYMTFEYFTSILAA-IGFRVLETKQSPKIAFF 241
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|298706395|emb|CBJ29404.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 162.155 bits (409), Expect = 6.167e-45 Identity = 118/267 (44.19%), Postives = 156/267 (58.43%), Query Frame = 0 Query: 4 KRKAQPVVP-VVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQA-MGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKK 268 KRK P+VP ++SRK+AR+IVT FHK+ +E ++ DK+A RL+ L+ +GGR AYQSAS LSVSFH+TSKWV +L MG+ P L R+LEVGAI T LLD P + AIDL S+H RI++ DFF L P +DV+ +SM+IN +PTA R + L ++L + G+LFL+LP CLT S T F + +R+GF VV +K TPK F LR + RL A +V SS A K Sbjct: 7 KRKPIPLVPPAIRSRKKARQIVTTFHKLEKEA---DEVSSSTAPDKQARLERLERELDEMGGRQAYQSASLLSVSFHNTSKWVTKQLAGKMGLRPANGEPPL---------RVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSL--EPAGEYDVVSSSMVINCVPTAKGRHEMLVGYRSHLR-NGGHLFLVLPLLCLTKSTRTTRESFLETL-SRIGFMVVAKKETPKVAFFCLRNT------RLEARDVQVGGSSLATK 251
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|325182898|emb|CCA17354.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 162.54 bits (410), Expect = 9.692e-45 Identity = 93/243 (38.27%), Postives = 140/243 (57.61%), Query Frame = 0 Query: 2 GRKRKAQPVVPV----VKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAF 240 KRK + V P+ +KSR++ARKI T FH++ L +E+ +N +++ ++ ++ +GG+ AYQ AS LS FH TSKW+ L + P + R+LEVGAI T LL CP + AIDL S+H I+Q DFF L P+ F V+V+SM++N +P +RG L+ H +L+ S G+LF+++P +CL +SKYMT F S++ GF ++E K +PK F Sbjct: 53 NNKRKGKHV-PITSNKIKSRRKARKITTLFHRLTKELKEVEDSIVVNEHERQQKVEHIKSKIDEIGGQEAYQEASILSTKFHRTSKWIFQIL---------TKHHRRPKSREEPLRVLEVGAINTQLLSCPWLAVRAIDLSSKHDGIEQKDFFTL--SPVGDFQVVVSSMVLNCVPDPQSRGKMLQLYHQHLKPS-GFLFIMIPLTCLNNSKYMTFEYFTSILAA-TGFRILETKKSPKIAFF 281 The following BLAST results are available for this feature:
BLAST of EWM28564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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