EWM28564.1, cds2149 (CDS) Nannochloropsis gaditana

Overview
NameEWM28564.1
Unique Namecds2149
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1022812..1022857 -
Alignment locationCM002458.1:1022571..1022685 -
Alignment locationCM002458.1:1021813..1022473 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28564.1
ProductProtein of unknown function DUF3321
Orig transcript idgnl|cribi|Naga_100009g2.607.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1022812..1022857 -
CM002458.1supercontigCM002458.1:1022571..1022685 -
CM002458.1supercontigCM002458.1:1021813..1022473 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016433rRNA (adenine) methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR021867Bmt2
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|585110982|gb|EWM28564.1| (Protein of unknown function DUF3321 [Nannochloropsis gaditana])

HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
Query:    1 MGRKRKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 273
            MGRKRKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL
Sbjct:    1 MGRKRKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 273          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|553179670|ref|XP_005852741.1| (hypothetical protein NGA_0720900, partial [Nannochloropsis gaditana CCMP526] >gi|422295791|gb|EKU23090.1| hypothetical protein NGA_0720900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query:   17 RKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 273
            RKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL
Sbjct:    2 RKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKKFDILL 258          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|813133608|ref|XP_012197877.1| (hypothetical protein SPRG_03893 [Saprolegnia parasitica CBS 223.65] >gi|641537425|gb|KDO31278.1| hypothetical protein SPRG_03893 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 196.438 bits (498), Expect = 1.856e-58
Identity = 108/232 (46.55%), Postives = 148/232 (63.79%), Query Frame = 0
Query:   12 PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243
            P VKSR+RAR+I T+FH+V   L  L++    +  + +A ++ L++ L+ LGGR  YQ AS LS SFH TSKWV + L   G+   +  P L          +LEVGAI T LL CP +   AIDL++RHA+IQQ+DFF +P     TFDV+V+SM+IN +PT   RG+ L+R   +L+   G+ FL+LP  CLT+S YMTV  F +++ TRVGF + E+K TPK   F LR
Sbjct:   18 PPVKSRRRAREITTEFHRVTHELNRLQDATKDD--EAKARQAELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFGLRPGKKQPPLE---------VLEVGAINTQLLVCPWLNVQAIDLIARHAKIQQLDFFDVPF--TKTFDVVVSSMVINCVPTPEKRGEMLQRTWRHLK-DDGHFFLMLPLLCLTNSNYMTVDHFEAIL-TRVGFEIREKKETPKIAFFCLR 234          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|669155764|ref|XP_008613444.1| (hypothetical protein SDRG_09299 [Saprolegnia diclina VS20] >gi|530735079|gb|EQC33321.1| hypothetical protein SDRG_09299 [Saprolegnia diclina VS20])

HSP 1 Score: 195.282 bits (495), Expect = 5.136e-58
Identity = 111/232 (47.84%), Postives = 148/232 (63.79%), Query Frame = 0
Query:   12 PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243
            P VKSR+RAR+I T+FH+V   L  L+ DA  + V K  H + L++ L+ LGGR  YQ AS LS SFH TSKWV + L   G+   +  P L          +LEVGAI T LL CP +   AIDL++RHA+IQQ+DFF +P     TFDV+V+SM+IN +PT   RG+ L+R   +L+   G+ FL+LP  CLT+S +MTV  F +++ TRVGF + E+K TPK   F LR
Sbjct:   18 PPVKSRRRAREITTEFHRVTHELNRLQ-DAAKDEVAKARH-AELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFGLRPGKKQPPLD---------VLEVGAINTQLLVCPWLNVQAIDLIARHAKIQQLDFFDVPF--TKTFDVVVSSMVINCVPTPEKRGEMLQRTWRHLK-DDGHFFLMLPLLCLTNSNHMTVDHFEAIL-TRVGFEIREKKETPKIAFFCLR 234          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|1173960729|gb|OQS06828.1| (hypothetical protein THRCLA_01144 [Thraustotheca clavata])

HSP 1 Score: 189.889 bits (481), Expect = 4.878e-51
Identity = 108/239 (45.19%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    5 RKAQPVVPVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243
            RK     P +KSR+RAR I T+FH+V   L  L+    L   D +A +  L++ L+ LGGR  YQ AS LS SFH TSKWV + L   G+   +  P LS         +LEVGAI T LL CP +   AIDL++RH RIQQID+F  P     TFDV+V+SM+IN +PT   RGD L+R   +L  + G+ FL+LP  CLT+S YMTV +F  +V   +GF + E+K +PK   + L+
Sbjct:   10 RKVPVGPPPIKSRRRARAITTEFHRVTHELTKLQ---GLKDEDAKARQVELEQRLQNLGGRQVYQDASILSTSFHKTSKWVFSLLTKFGLRPAKKQPPLS---------VLEVGAINTQLLVCPWLDVQAIDLIARHPRIQQIDYFDYPF--TKTFDVVVSSMVINCVPTHEKRGDMLQRTWRHLNPN-GHFFLMLPLLCLTNSNYMTVERFEEIV-KYIGFDIREKKESPKIAFYCLQ 232          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|1173948059|gb|OQR96217.1| (hypothetical protein ACHHYP_16580 [Achlya hypogyna])

HSP 1 Score: 174.866 bits (442), Expect = 5.277e-50
Identity = 104/241 (43.15%), Postives = 142/241 (58.92%), Query Frame = 0
Query:   12 PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHR-SRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASAR--------GDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLR 243
            P VKSR+RAR+I T+FH+V   L  L+E       +K+A R + L++ L+ LGGR  YQ AS LS SFH TSKWV + L    +   +  P L          +LEVGAI T LL CP +   AIDL++RH +I+Q+DFF LP     TFDV+V+SM+IN +PT   R        G+ L+    +L    G+ FL+LP  CLT+S +MTV  F + V  R+GF + E+K +PK   F L+
Sbjct:   17 PPVKSRRRAREITTEFHRVTHELNRLQESK-----EKDATRQAELEQRLKDLGGRQVYQDASILSTSFHRTSKWVFSLLTKFDLRPKKKQPPLE---------VLEVGAINTQLLVCPWLNVDAIDLIARHPKIRQLDFFDLPF--TKTFDVVVSSMVINCVPTPEKRGSVPMAISGEMLQSTWRHLNEG-GHFFLMLPLLCLTNSNFMTVEHFEA-VLVRIGFEIREKKDSPKIAFFCLK 239          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|673017164|ref|XP_008862543.1| (hypothetical protein H310_01260 [Aphanomyces invadans] >gi|574481746|gb|ETW08738.1| hypothetical protein H310_01260 [Aphanomyces invadans])

HSP 1 Score: 164.081 bits (414), Expect = 7.159e-46
Identity = 101/242 (41.74%), Postives = 139/242 (57.44%), Query Frame = 0
Query:    2 GRKRKAQPVV---PVVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAF 240
            G+K K + V    P VKSR+RAR++ T+FH+V   L  L         D       L+  L+ +GGR AYQ AS LS +   TS+WV   L             L P++   + ++LEVGAI T L+ CP +   AIDL+SRH +IQQ+DFF L       FDV+V+SM+IN +PT   RG+ L+R   +L    G+ FL+LP  CLT+S +MTV  F  LV  ++GF + E+K TPK +AF
Sbjct:    5 GKKSKVRKVPIGPPPVKSRRRARELTTEFHRVTHELQRLTAIKGKKDADTVQRIQELELRLKDMGGREAYQDASILSTNLFKTSRWVFQLLTKF---------ELRPAKKMPQLQVLEVGAINTQLVVCPWLNVLAIDLISRHPKIQQMDFFDLDLA--RRFDVVVSSMVINCVPTPEKRGEMLQRTWTHLNDG-GHFFLMLPLLCLTNSTFMTVDHFEKLV-QQLGFVLREKKETPK-IAF 232          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|635361044|emb|CCI10718.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 164.081 bits (414), Expect = 1.094e-45
Identity = 95/226 (42.04%), Postives = 129/226 (57.08%), Query Frame = 0
Query:   15 KSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAF 240
            KSR++AR+I T FH++N  L   EE    N+ +K     R++  +  +GG  AYQ AS LS  FH TSKWV   L         +     PS       +LEVGAI T LL CP +   AIDL S H RI+Q DFF L   P   F V+V+SM++N +P A +RG  L   H +L+ S G+LF+++P +CL +SKYMT   F S++   +GF V+E K +PK   F
Sbjct:   29 KSRRKARQITTVFHRLNKDLKEAEESMAPNVREKREEVERIKSKIREIGGHEAYQQASILSTKFHRTSKWVFQIL---------TNHHRRPSSGEVPLSVLEVGAINTQLLSCPWLDVRAIDLNSMHDRIEQRDFFTL--DPAGDFHVVVSSMVLNCVPDAQSRGRMLELYHKHLKPS-GFLFVMIPLTCLHNSKYMTFEYFTSILAA-IGFRVLETKQSPKIAFF 241          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|298706395|emb|CBJ29404.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 162.155 bits (409), Expect = 6.167e-45
Identity = 118/267 (44.19%), Postives = 156/267 (58.43%), Query Frame = 0
Query:    4 KRKAQPVVP-VVKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQA-MGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAFVLRASGKCDEGRLTAGREKVTSSSWAKK 268
            KRK  P+VP  ++SRK+AR+IVT FHK+       +E ++    DK+A   RL+  L+ +GGR AYQSAS LSVSFH+TSKWV  +L   MG+      P L         R+LEVGAI T LLD P +   AIDL S+H RI++ DFF L   P   +DV+ +SM+IN +PTA  R + L    ++L  + G+LFL+LP  CLT S   T   F   + +R+GF VV +K TPK   F LR +      RL A   +V  SS A K
Sbjct:    7 KRKPIPLVPPAIRSRKKARQIVTTFHKLEKEA---DEVSSSTAPDKQARLERLERELDEMGGRQAYQSASLLSVSFHNTSKWVTKQLAGKMGLRPANGEPPL---------RVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSL--EPAGEYDVVSSSMVINCVPTAKGRHEMLVGYRSHLR-NGGHLFLVLPLLCLTKSTRTTRESFLETL-SRIGFMVVAKKETPKVAFFCLRNT------RLEARDVQVGGSSLATK 251          
BLAST of EWM28564.1 vs. NCBI_GenBank
Match: gi|325182898|emb|CCA17354.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 162.54 bits (410), Expect = 9.692e-45
Identity = 93/243 (38.27%), Postives = 140/243 (57.61%), Query Frame = 0
Query:    2 GRKRKAQPVVPV----VKSRKRARKIVTQFHKVNDALAILEEDANLNLVDKEAHRSRLQESLEALGGRAAYQSASQLSVSFHSTSKWVLARLQAMGIIRMQSAPSLSPSQPSQKPRLLEVGAITTTLLDCPAVQTTAIDLLSRHARIQQIDFFHLPQPPLSTFDVIVASMLINSLPTASARGDFLRRCHAYLEASKGYLFLILPSSCLTHSKYMTVGKFRSLVTTRVGFAVVEEKWTPKTVAF 240
              KRK + V P+    +KSR++ARKI T FH++   L  +E+   +N  +++     ++  ++ +GG+ AYQ AS LS  FH TSKW+   L         +     P    +  R+LEVGAI T LL CP +   AIDL S+H  I+Q DFF L   P+  F V+V+SM++N +P   +RG  L+  H +L+ S G+LF+++P +CL +SKYMT   F S++    GF ++E K +PK   F
Sbjct:   53 NNKRKGKHV-PITSNKIKSRRKARKITTLFHRLTKELKEVEDSIVVNEHERQQKVEHIKSKIDEIGGQEAYQEASILSTKFHRTSKWIFQIL---------TKHHRRPKSREEPLRVLEVGAINTQLLSCPWLAVRAIDLSSKHDGIEQKDFFTL--SPVGDFQVVVSSMVLNCVPDPQSRGKMLQLYHQHLKPS-GFLFIMIPLTCLNNSKYMTFEYFTSILAA-TGFRILETKKSPKIAFF 281          
The following BLAST results are available for this feature:
BLAST of EWM28564.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110982|gb|EWM28564.1|0.000e+0100.00Protein of unknown function DUF3321 [Nannochlorops... [more]
gi|553179670|ref|XP_005852741.1|0.000e+0100.00hypothetical protein NGA_0720900, partial [Nannoch... [more]
gi|813133608|ref|XP_012197877.1|1.856e-5846.55hypothetical protein SPRG_03893 [Saprolegnia paras... [more]
gi|669155764|ref|XP_008613444.1|5.136e-5847.84hypothetical protein SDRG_09299 [Saprolegnia dicli... [more]
gi|1173960729|gb|OQS06828.1|4.878e-5145.19hypothetical protein THRCLA_01144 [Thraustotheca c... [more]
gi|1173948059|gb|OQR96217.1|5.277e-5043.15hypothetical protein ACHHYP_16580 [Achlya hypogyna... [more]
gi|673017164|ref|XP_008862543.1|7.159e-4641.74hypothetical protein H310_01260 [Aphanomyces invad... [more]
gi|635361044|emb|CCI10718.1|1.094e-4542.04unnamed protein product [Albugo candida][more]
gi|298706395|emb|CBJ29404.1|6.167e-4544.19conserved unknown protein [Ectocarpus siliculosus][more]
gi|325182898|emb|CCA17354.1|9.692e-4538.27conserved hypothetical protein [Albugo laibachii N... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2157rna2157Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications