EWM28569.1, cds2144 (CDS) Nannochloropsis gaditana

Overview
NameEWM28569.1
Unique Namecds2144
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1005603..1006490 +

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Properties
Property NameValue
Protein idEWM28569.1
Productserine threonine protein kinase
Orig transcript idgnl|cribi|Naga_100009g7.612.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1005603..1006490 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0005515protein binding
GO:0051082unfolded protein binding
GO:0031072heat shock protein binding
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR001305HSP_DnaJ_Cys-rich_dom
Homology
[Close]
BLAST of EWM28569.1 vs. NCBI_GenBank
Match: gi|585110987|gb|EWM28569.1| (serine threonine protein kinase [Nannochloropsis gaditana])

HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0 
Query:    1 MARKEEDTSARRTTQDFSLPLLVLLLSRLPLACTFSTPTSSSAIGINHGDVLKTLNNAATIPLIDRVPTFRFYQGGVCQLQLSGRGGLAECRARLHVAISTLLNNKTSSKQTEREEIHHEENGVSQRCLVADIVEIESLEMLEGMLEKQRVQQSSTAQSVSCGSNLNDDVLLVKFYGRSCKQCVELGPLYDTLPFVYRDKSLRFGRADVTNFPTLVVPPPPPQNFASLDRSQNIEDRLEGCPRCGGGGFVVCTECNGQGHLIRSVDGHTVADVCMTCVGQRKIPCQQCGGKCYLC 295
            MARKEEDTSARRTTQDFSLPLLVLLLSRLPLACTFSTPTSSSAIGINHGDVLKTLNNAATIPLIDRVPTFRFYQGGVCQLQLSGRGGLAECRARLHVAISTLLNNKTSSKQTEREEIHHEENGVSQRCLVADIVEIESLEMLEGMLEKQRVQQSSTAQSVSCGSNLNDDVLLVKFYGRSCKQCVELGPLYDTLPFVYRDKSLRFGRADVTNFPTLVVPPPPPQNFASLDRSQNIEDRLEGCPRCGGGGFVVCTECNGQGHLIRSVDGHTVADVCMTCVGQRKIPCQQCGGKCYLC
Sbjct:    1 MARKEEDTSARRTTQDFSLPLLVLLLSRLPLACTFSTPTSSSAIGINHGDVLKTLNNAATIPLIDRVPTFRFYQGGVCQLQLSGRGGLAECRARLHVAISTLLNNKTSSKQTEREEIHHEENGVSQRCLVADIVEIESLEMLEGMLEKQRVQQSSTAQSVSCGSNLNDDVLLVKFYGRSCKQCVELGPLYDTLPFVYRDKSLRFGRADVTNFPTLVVPPPPPQNFASLDRSQNIEDRLEGCPRCGGGGFVVCTECNGQGHLIRSVDGHTVADVCMTCVGQRKIPCQQCGGKCYLC 295
[Close]
BLAST of EWM28569.1 vs. NCBI_GenBank
Match: gi|553194992|ref|XP_005856069.1| (serine threonine protein kinase [Nannochloropsis gaditana CCMP526] >gi|422292989|gb|EKU20290.1| serine threonine protein kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 316.235 bits (809), Expect = 7.617e-107
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:  145 MLEKQRVQQSSTAQSVSCGSNLNDDVLLVKFYGRSCKQCVELGPLYDTLPFVYRDKSLRFGRADVTNFPTLVVPPPPPQNFASLDRSQNIEDRLEGCPRCGGGGFVVCTECNGQGHLIRSVDGHTVADVCMTCVGQRKIPCQQCGGKCYLC 295
            MLEKQRVQQSSTAQSVSCGSNLNDDVLLVKFYGRSCKQCVELGPLYDTLPFVYRDKSLRFGRADVTNFPTLVVPPPPPQNFASLDRSQNIEDRLEGCPRCGGGGFVVCTECNGQGHLIRSVDGHTVADVCMTCVGQRKIPCQQCGGKCYLC
Sbjct:    1 MLEKQRVQQSSTAQSVSCGSNLNDDVLLVKFYGRSCKQCVELGPLYDTLPFVYRDKSLRFGRADVTNFPTLVVPPPPPQNFASLDRSQNIEDRLEGCPRCGGGGFVVCTECNGQGHLIRSVDGHTVADVCMTCVGQRKIPCQQCGGKCYLC 151
[Close]
BLAST of EWM28569.1 vs. NCBI_GenBank
Match: gi|298710466|emb|CBJ25530.1| (serine/threonine protein kinase [Ectocarpus siliculosus])

HSP 1 Score: 67.3958 bits (163), Expect = 6.169e-9
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 0 
Query:  238 LEGCPRCGGGGFVVCTECNGQGHLIR-SVDG-HTVADVCMTCVGQRKIPCQQCGGKCYLC 295
            +E C  CGG GFV C EC G+G + R S DG HT+A  C +CVG +++ C  CGGKCY+C
Sbjct:  449 VENCDVCGGSGFVPCEECGGRGAVSRASPDGKHTMAVTCPSCVGYKRLRCPSCGGKCYMC 508
The following BLAST results are available for this feature:
BLAST of EWM28569.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585110987|gb|EWM28569.1|0.000e+0100.00serine threonine protein kinase [Nannochloropsis g... [more]
gi|553194992|ref|XP_005856069.1|7.617e-107100.00serine threonine protein kinase [Nannochloropsis g... [more]
gi|298710466|emb|CBJ25530.1|6.169e-953.33serine/threonine protein kinase [Ectocarpus silicu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2152rna2152Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications