EWM28566.1, cds2136 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|585110984|gb|EWM28566.1| (hypothetical protein Naga_100009g16 [Nannochloropsis gaditana]) HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0 Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0 Query: 1 MLKVDGGKTQVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAARH 342 MLKVDGGKTQVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAARH Sbjct: 1 MLKVDGGKTQVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAARH 342
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|260802418|ref|XP_002596089.1| (hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae] >gi|229281343|gb|EEN52101.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]) HSP 1 Score: 179.874 bits (455), Expect = 1.450e-49 Identity = 132/339 (38.94%), Postives = 177/339 (52.21%), Query Frame = 0 Query: 4 VDGGKTQVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKAR-QNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAP-VARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 VD G LFDHSAQ+ + + + K V + G ++ W+ IG L +GG F A +A +G+GGM+++P +A + RP WV + W++ Y FDYLV+AHNGKCA RLM SAG AP + LL +F L + MQLCSL+VL+VV + LP EGAFVE ++WVA+ AKLGQ G +E W I SS F HKVPQENIP A EVT LL AF + G + R + + + +QLWGA P++V D ++ V FQAS G+CGDW+++P I AA Sbjct: 53 VDVGGKTFLFDHSAQYFTVSD-----------NRFAKIVSFLHAKGAVKVWNGP-IGVL-KGGRFVKNA------NLQAFVGTGGMKSVPECLATLSRVQRPAWVGNVVWEPMAKKWKVDKYGY----FDYLVIAHNGKCADRLMGSAG---APKIHELLRVRFTPKLI--QKVQQMQLCSLWVLLVVFPTSLKLP---FEGAFVED-SDVTWVANNTAKLGQRA-IGDNSE----CWTIFSSRQFGAAHKVPQENIPPGKADEVTKRLLAAFAKSAGLDSRALPSP---TYTKVQLWGAAVPLNVLDGADCV---FQASQNVGICGDWLVSPCIEGAA 348
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|260802416|ref|XP_002596088.1| (hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae] >gi|229281342|gb|EEN52100.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]) HSP 1 Score: 179.104 bits (453), Expect = 2.679e-49 Identity = 131/339 (38.64%), Postives = 176/339 (51.92%), Query Frame = 0 Query: 4 VDGGKTQVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKAR-QNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAP-VARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 VD G LFDHSAQ+ + + + K V + G ++ W+ IG L +GG F +A +G+GGM+++P +A + RP WV + W++ Y FDYLV+AHNGKCA RLM SAG AP + LL +F L + MQLCSL+VL+VV + LP EGAFVE ++WVA+ AKLGQ G +E W I SS F HKVPQENIP A EVT LL AF + G + R + + + +QLWGA P++V D ++ V FQAS G+CGDW+++P I AA Sbjct: 53 VDVGGKTFLFDHSAQYFTVSD-----------NRFAKIVSFLHAKGAVKVWNGP-IGVL-KGGRFVKN------TNLQAFVGTGGMKSVPECLATLSRVQRPAWVGNVVWEPMAKKWKVDKYGY----FDYLVIAHNGKCADRLMGSAG---APKIHELLRVRFTPKLI--QKVQQMQLCSLWVLLVVFPTSLKLP---FEGAFVED-SDVTWVANNTAKLGQRAT-GDNSE----CWTIFSSRQFGAAHKVPQENIPPGKADEVTKRLLAAFAKSAGLDSRALPSP---TYTKVQLWGAAVPLNVLDGADCV---FQASQNVGICGDWLVSPCIEGAA 348
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|1126175444|ref|XP_019619945.1| (PREDICTED: uncharacterized protein LOC109466655 [Branchiostoma belcheri]) HSP 1 Score: 171.4 bits (433), Expect = 2.308e-46 Identity = 128/340 (37.65%), Postives = 178/340 (52.35%), Query Frame = 0 Query: 3 KVDGGKTQVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKAR-QNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAP-VARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 K+D G LFDHSAQ+ + D + K V + G ++ W IG L +GG F R+++ +A +G+ M+++P +A ++RP WV + W++ Y FDYLV+AHNGKCA RLM ++G AP + LL +F L + MQLCSL+VL+VV + L + EGAFVE ++WVA+ AKLGQ G +E W I SS F HKVPQENIP A EVT LL AF + G + R + + +QLWGA P++V D ++ V FQAS G+CGDW+++P I AA Sbjct: 50 KIDVGGKTFLFDHSAQYFTVSD-----------DRFAKIVSFLHSKGAVKVWKGP-IGVL-KGGRFE-RSSNL-----QAFVGTESMQSVPECLATLSRVERPVWVGNVVWEPMAKKWKVDKYGY----FDYLVIAHNGKCADRLMGNSG---APRIHDLLRVRFTPKLI--HKVQQMQLCSLWVLLVVFPASLKL---SFEGAFVEDAD-ITWVANNTAKLGQRAT-GDNSE----CWTIFSSRQFGTAHKVPQENIPPGKADEVTKRLLAAFARSAGLDSRALPTP---TFTKVQLWGAAVPLNVLDGADCV---FQASHNVGICGDWLVSPCIEGAA 346
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|551663229|ref|XP_005834379.1| (hypothetical protein GUITHDRAFT_106844 [Guillardia theta CCMP2712] >gi|428178524|gb|EKX47399.1| hypothetical protein GUITHDRAFT_106844 [Guillardia theta CCMP2712]) HSP 1 Score: 171.014 bits (432), Expect = 6.808e-46 Identity = 120/352 (34.09%), Postives = 180/352 (51.14%), Query Frame = 0 Query: 2 LKVDGGKTQ-VLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNLEIDRPKWVSKARQNKDGTWRLWH-------YQEEL---DDFDYLVVAHNGKCAARLMKSAG-PALAPVARLLETKFGANLRGGSTPR-FMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 +K GK + DHS QF +A T P + V E E +G+++EW +G L +G F+ A S + +G GG+ AI +++++L ++ WV+ + +DG WRL+ E+ DFDY+VVAHNGKCA RLM+ A PAL RLL+ KF + P+ MQL SL+VL ++G + LP EGAFV+ P L WV+D KL ++ EG W ++SS + +KVPQE IP + + LL+AF + G + + + + +QLWGAG P++ P + +T G+CGDW++ PS+ AA Sbjct: 38 MKFAAGKAKNAKVDHSTQFFTA------TDPK-----FTALVEEWEKNGVVQEWKGP-VGVLDKGS-FTGLAASS-----KLWVGVGGIDAIARHLSKSLRVELDTWVAVVERQEDGKWRLFRDNMRRRRLSSEVGRQSDFDYIVVAHNGKCAERLMRDAEVPALH---RLLKCKFS----NAAPPKDLMQLSSLWVLAFAVEGTLGLP---FEGAFVKNHPDLCWVSDNTRKLATPAQREKVAEGGYETWTVISSRNYGTRNKVPQEAIPEDVEERIVDELLRAFESSAGLK----NGSIRPIARRVQLWGAGVPMNAFTGG---PCVLDRATASGICGDWLIEPSVQGAA 354
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|674892064|emb|CDY40666.1| (BnaC03g33820D [Brassica napus]) HSP 1 Score: 162.155 bits (409), Expect = 4.302e-42 Identity = 120/338 (35.50%), Postives = 170/338 (50.30%), Query Frame = 0 Query: 11 VLFDHSAQFLSAPSS----YVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYM---ARNLEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALG-KEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 ++FDH+AQFL+A S YV D W + G++REW +G L GG FS S P I GMR++ + +R + RP W+SK + +G W L FD +V+AHNGKCA RL+ S+G L VA+ ++ + L S++ L+ D P LPT N EGAFV+GV +LSW+ + AKLG N GT W S+ T+ +++KVPQENIP T+ +V + +LQ +ALG EG + + LQLWGA P + + VP IF G+CGDW+L ++ +AA Sbjct: 145 LVFDHAAQFLTADDSRFIQYV--------DGWLE-------KGLVREWKGA-VGDLEVGGSFSQFPPSS----PPRYIAVNGMRSLADSLLLESRLANVVRPCWISKL-EPLNGMWHLSENGTPRGQFDVIVIAHNGKCANRLLSSSGLPL--VAKQMKK--------------LDLSSIWALLAAFDDP--LPTVNFEGAFVKGVESLSWMGNNSAKLG--------NGGTPHCWTFFSTATYGKQNKVPQENIPTVTSEKVRAGMLQGVEIALGLPEGSLPKPVY----TRLQLWGAALPKN----TPAVPCIFDPQGRAGICGDWLLGSNLESAA 427
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|357116570|ref|XP_003560053.1| (PREDICTED: uncharacterized protein LOC100824134 [Brachypodium distachyon] >gi|944080238|gb|KQK15590.1| hypothetical protein BRADI_1g23880 [Brachypodium distachyon]) HSP 1 Score: 160.614 bits (405), Expect = 1.398e-41 Identity = 117/338 (34.62%), Postives = 165/338 (48.82%), Query Frame = 0 Query: 10 QVLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIP-AYMARN--LEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAG-PALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPN----LEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAA 339 Q++FDH+AQF +A + + K V E G++REW IG L GG F P + + PR IG GMR + A + N +++ RP W+SK + +G WRL+ ++ +D +V+AHNGKCA RL+ ++G P L + LE L S++ L+ +GP P+P N EGAFV GV +LSW+A+ KL PE W S+ ++ +KVPQENIP TA +V +L LALG F + +QLWGA P++ VP IF G+CGDW+ SI AA Sbjct: 124 QLVFDHAAQFFTASD-----------ERFQKLVEEWVERGLVREWRGS-IGELEAGGHFRPIHSST----PR-YIGVNGMRPLADAMLPENDLIKVIRPSWISKL-EPFNGLWRLFENEKPRGQYDAIVIAHNGKCANRLLSTSGLPQLTKQMKRLE-----------------LSSVWALLAAFEGPFPIPHNNSYGTFEGAFVRGVDSLSWMANNTRKLFPFETDRPE------CWTFFSTASYGRRNKVPQENIPNATAEKVQREMLGGVELALGLSKGSLQLPF---YTRVQLWGAALPMNTPG----VPCIFDPQGRAGICGDWLTGSSIEAA 413
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|923630512|ref|XP_013750444.1| (PREDICTED: uncharacterized protein LOC106452814 [Brassica napus]) HSP 1 Score: 160.614 bits (405), Expect = 1.606e-41 Identity = 119/338 (35.21%), Postives = 169/338 (50.00%), Query Frame = 0 Query: 11 VLFDHSAQFLSAPSS----YVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYM---ARNLEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALG-KEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 ++FDH+AQF +A S YV D W + G++REW +G L GG FS S P I GMR++ + +R + RP W+SK + +G W L FD +V+AHNGKCA RL+ S+G L VA+ ++ + L S++ L+ D P LPT N EGAFV+GV +LSW+ + AKLG N GT W S+ T+ +++KVPQENIP T+ +V + +LQ +ALG EG + + LQLWGA P + + VP IF G+CGDW+L ++ +AA Sbjct: 144 LVFDHAAQFFTADDSRFIQYV--------DGWLE-------KGLVREWKGA-VGDLEVGGSFSQFPPSS----PPRYIAVNGMRSLADSLLLESRLANVVRPCWISKL-EPLNGMWHLSENGTPRGQFDVIVIAHNGKCANRLLSSSGLPL--VAKQMKK--------------LDLSSIWALLAAFDDP--LPTVNFEGAFVKGVESLSWMGNNSAKLG--------NGGTPHCWTFFSTATYGKQNKVPQENIPTVTSEKVRAGMLQGVEIALGLPEGSLPKPVY----TRLQLWGAALPKN----TPAVPCIFDPQGRAGICGDWLLGSNLESAA 426
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|923548449|ref|XP_013735774.1| (PREDICTED: uncharacterized protein LOC106438988 [Brassica napus]) HSP 1 Score: 159.073 bits (401), Expect = 5.248e-41 Identity = 117/338 (34.62%), Postives = 170/338 (50.30%), Query Frame = 0 Query: 11 VLFDHSAQFLSAPSS----YVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYM---ARNLEIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLPTPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALG-KEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 ++FDH+AQF +A S YV D W + G++REW +G L GG F+ + S P I GMR++ + +R + RP W+SK + +G W L FD +V+AHNGKCA RL+ ++G L VA+ ++ + L S++ L+ D P LPT N EGAFV+GV +LSW+ + AKLG N GT W S+ T+ +++KVPQENIP T+ +V + +LQ +ALG EG + + LQLWGA P + + VP IF G+CGDW+L ++ +AA Sbjct: 145 LVFDHAAQFFTADDSRFIQYV--------DGWLE-------KGLVREWKGA-MGELEVGGSFTQFPSSS----PPKYIAVNGMRSLADSLLLGSRLANVVRPCWISKL-EPLNGMWHLSENGTPRGQFDVIVIAHNGKCANRLLSASGLPL--VAKQMKK--------------LDLSSIWALLAAFDDP--LPTVNFEGAFVKGVESLSWMGNNSAKLG--------NGGTPHCWTFFSTATYGKQNKVPQENIPTVTSEKVRAGMLQGVEVALGLPEGSLPKPVY----TRLQLWGAALPKN----TPAVPCIFDPQGRAGICGDWLLGSNLESAA 427
BLAST of EWM28566.1 vs. NCBI_GenBank
Match: gi|1208528619|gb|OWM82053.1| (hypothetical protein CDL15_Pgr001627 [Punica granatum]) HSP 1 Score: 161.77 bits (408), Expect = 5.617e-41 Identity = 117/335 (34.93%), Postives = 171/335 (51.04%), Query Frame = 0 Query: 11 VLFDHSAQFLSAPSSYVSTSPSSPSDTWNKWVCEMECDGILREWDSQRIGTLSRGGVFSPRATDSGGVQPRALIGSGGMRAIPAYMARNL-EIDRPKWVSKARQNKDGTWRLWHYQEELDDFDYLVVAHNGKCAARLMKSAGPALAPVARLLETKFGANLRGGSTPRFMQLCSLYVLMVVLDGPVPLP----TPNLEGAFVEGVPALSWVADQGAKLGQNVEKGPENEGTRRAWVIVSSPTFAEEHKVPQENIPIETAAEVTSLLLQAFRLALGKEGREYDAAFKVSTSALQLWGAGNPISVADVSEEVPFIFQASTGCGVCGDWMLAPSIPAAA 340 ++FDH+AQF S S ++ N W+ G++REW I L GG F+P + P IG GMR + +A+ L + RP W+SK + +G W L + FD +V+AHNGKCA RL+ S+G L +AR ++ ++L S++ L+ D P+P+P P EGAFV+GV +LSW+A+ AKL ++ E+ GT W S+ + + +KVPQENIP TA +V + +L + ALG F + LQLWGA P++ S VP IF G+CGDW+L S+ +AA Sbjct: 151 LVFDHAAQFFS-------VSDPRFAELVNGWLDT----GLVREWPGL-IEELEAGGHFTPLPSP-----PPRYIGVHGMRPLADSLAQTLPNVVRPCWISKL-EPFNGRWHLSENGKNRGGFDAIVIAHNGKCANRLLASSG--LPLIARQMKR--------------LELSSIWALLAAFDDPLPIPGSRGAPPFEGAFVKGVDSLSWMANNSAKLSRS-----ESNGT-HCWTFFSTSAYGKRNKVPQENIPTVTAEKVKADMLGGVQSALGLPEGSLQKPFYIR---LQLWGAALPMN----SPNVPCIFDPRGRAGICGDWLLGSSMESAA 438 The following BLAST results are available for this feature:
BLAST of EWM28566.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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