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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100009g48.665.mrna |
Orig protein id | gnl|cribi|Naga_100009g48.665 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:914317..916209 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2112 ID=rna2112|Name=rna2112|organism=Nannochloropsis gaditana|type=mRNA|length=1266bp CTCTCGTCGATTCTTCCTAGTCGCCTTCCTATATCACTTATACCATATAC CACGCGAGTCCTCTCATGATTCTTGACCGTTGATTATGCTCTCACGATAC TGGTCAACAGTTTCCCATGATCATCCAGGCCGGCGCCGTCAAGGTCTTAG CCAAAGATGTGGTTTCTATTGCTAAGACGGCTGGAGATGCCATCATGTCT ATATACGCCTTCCCGGACACTGTTAGCTGGGACGTTAAGGCAAAGTCCGA CAACTCTCCCCTGACCGCTGCTGATCTTGCTGCCAACAACCTGATTTGTG CCTCGCTCAAGGAAAAGTATCCTTCGATTCCCATCGTTTCCGAGGAAAAC AAAATGCTTCCGTATGAAGAACGAAGCAATTGGCCTTTCTACTGGTGCGT TGACCCCCTGGACGGAACGAAGGAGTTTCTAAAGCGGAACGGCCAATTCA CGGTAAACATTGGGTTATGCCAGGGGAAGTCTCCCATATTTGGGGTGGTA CACGTGCCAGCTATGGAACCGGCTAAGACGTACTATGGCGCGAAAGGCCA CGGCGCCTTTGTGGAGATCGCGGATGAGCCACCAATTCCCATCAAGGTGA AAGAATTCAGTGAAAAGGATCCAAACTTGGCCATCGTTGCCTCTGCTTCA CACAATACCCCCGAAACGGAGAATTTTATAAGCAAGTACCAGAACCCGAC TCTTAAGGCGCTAGGATCTTCTTTAAAGCTTTTGATGGTAGCCGAGGGAG AGGCGCACGTCTACCCCCGGTTGGCACCAACCTGTGAATGGGACACCTGC GCCTCACACGCGGTGGTGGAGGCGGCAGGAGGAGAGGTTCTGCAAGCGGA AGGAGGCAAGGCATGCCAGCCCGGACTGCCCGTGGAGTATAACAAGCCGG ACGCGTTGAATCCGTTTTTCATTGTGTACGGCAGACGCCGTGACTGAAAA GAGTTCCGCATAGATGTGTCCACGGTACAAGTGCGATAGCAGAGTGAGCT AGAAAGGAAAATTTGCAAGCTGGGCTTGACATGTTGGTGAGCTGTAGGGT GCTGGAATAGGAAAAGGTCACGGTGATACATGTTTTATGTGATGGCAACC GCGCAGCTTCTGGAATATTCGGGTGAGTGGAAGGAGTGAGACTAACTCTG CGTCACCATCAGAAGGAGGAACGAAAGTACTCGTATTGCCAGCCTTATGC CTCAAGAAACTAAACAATAGGCGATTACCAAAAGGGTCTACAACGACTCG AATAATGCGGCACTTT back to topprotein sequence of rna2112 >rna2112-protein ID=rna2112-protein|Name=rna2112|organism=Nannochloropsis gaditana|type=polypeptide|length=387bp MTIKRKGLLSPRCPDVHAAVVATDCCHANTATSVKHGGEKPPVVSTSGDL PKYEPRVADDGVLHGACQTEIKALRAEVELLRKKLDAALGDIPACSICLE CVDYPVELQECRHLFCCQCFYMYAKWKTTGNIACPACRTTVCKAPLPPPL AFIQHLDAIKVAKRRQQEAVRTGADPGQSLEGGIYRIDAKAESQRRSEEE SERKVGEKIKLERWKEGVSMMKSHDEEIGEDDDRSAAGLLDRAGPSGQAQ EDRDMEAKKTAAATAIAARRARAAYQGQMVELKVMFEAAERMGEGAVGLN SSRRIRPRTIRNAEMDGSTHLNYDESDGVYRCLNCHWEVDEGGLCARCLH DDDDEEEDVDVAHVSRTDFYPPGQFDYDSDEDGTLDR back to topmRNA from alignment at CM002458.1:914317..916209+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2112 ID=rna2112|Name=rna2112|organism=Nannochloropsis gaditana|type=mRNA|length=1893bp|location=Sequence derived from alignment at CM002458.1:914317..916209+ (Nannochloropsis gaditana) ATAGTAATGACGGTATCCACCAACCCTGTGCTTCTCGTTTGCGGAGCAAG
TATTGACGGTCGATCAAACGAGTTACCCCTATTTTCCGAAGCTCCCGGAG
CCCCCCGAAAAAAACAAAACTTGGCTTGCCATACAAGAATATGTGTAGCC
GCGTAGAGCCTTCTGTGGTGTCTGCTTATTGCCGATTGACGACTTCTTTC
CTCAGTCTGACGCTCGTGAAATTACCTATATATCAGACGGGCACTTACGA
CAAGTATGACGATTAAGCGAAAGGGGCTTTTGTCACCAAGATGTCCCGAT
GTTCATGCTGCTGTTGTAGCGACAGACTGCTGTCATGCTAACACGGCGAC
TTCAGTGAAGCATGGTGGAGAGAAGCCTCCAGTAGTGTCCACGAGTGGTG
ACTTGCCAAAGTATGAGCCACGCGTTGCAGATGACGGAGTCCTCCACGGT
GCTTGTCAAACAGAGATTAAGGCTCTGCGGGCGGAGGTTGAACTACTACG
CAAGAAGCTTGACGCTGCATTAGGTGACATACCAGCATGCTCTATTTGCC
TGGAATGCGTTGACTATCCTGTAGAGCTGCAGGAGTGTCGGCACCTCTTC
TGCTGTCAGTGCTTCTACATGTATGCCAAATGGAAAACTACTGGGAACAT
AGCATGTCCTGCGTGTCGTACAACAGTATGTAAGGCACCGCTACCACCGC
CTCTCGCCTTCATACAACATTTAGACGCGATAAAGGTTGCGAAGCGGCGA
CAACAAGAGGCGGTAAGGACGGGCGCAGACCCAGGACAAAGTCTCGAGGG
AGGTATATATAGAATTGACGCAAAAGCAGAAAGTCAGAGAAGAagcgaag
aagaaagtgaACGCAAAGTAGGAGAGAAAATCAAATTGGaaagatggaag
gaaggggtaagCATGATGAAGTCACATGATGAGGAGAtaggagaggatga
cgaccGCTCTGCTGCAGGTCTATTGGATCGTGCTGGCCCGTCGGggcagg
cgcaggaggatAGGGAtatggaggcaaagaagactGCAGCTGCTACCGCC
ATTGCTGCTCGCCGTGCCCGTGCGGCGTACCAAGGCCAGATGGTCGAGTT
GAAAGTCATGTTCGAGGCTGCAGAGCGCATGGGCGAGGGGGCTGTCGGGC
TGAATTCCTCCAGAAGAATACGGCCGCGTACAATAAGAAATGCAGAGATG
GATGGAAGCACTCATCTCAACTACGATGAGTCTGACGGTGTGTACCGCTG
CCTGAACTGCCATTGGGAGGTGGATGAAGGGGGCCTGTGCGCCCGATGCC
tccacgacgacgacgatgaagaggaggatgtagATGTAGCACATGTGTCG
AGGACGGATTTCTACCCACCGGGTCAGTTTGATTACGATAGCGATGAAGA
TGGGACTTTGGATCGATGACCACGAATTCAGTGATGGCGATGGAGTGACG
AGGGGATTGCCATTGAGATGAGCGTCAAACCGAGATTGCTTCTATTGGCT
TTTGTTTTGATCCCTACCACGCCGCCTAGTAAGTGGAGAAGGATGGATAA
AATGTatgaaaggaagagggagccggGTAGGACtaaaaggaggaaacaag
agggagcgggaaaatggaagaaatggagagcGGTGAGGCAACTGTCGCAC
TGGTTCGTGATGCGTTTGAAACTGAGCGTGACAGAAGATAAACGAGCGTT
GTATCCCGCAGCGAGTCATGTGAAAGCGACCTAGAGACGAGGTCTGCTAG
CCATGAAGGAGCgggcgaaagagaaggaacggTGCTGAGACGCATGAAAT
GGGGCACATCATACGGTTATGTATCTCTTTTCGTGAGCAGAGCACGGGAA
TAGCAATCATATGTGACATCAATGTAAATATAAACTTCAGTGT back to topCoding sequence (CDS) from alignment at CM002458.1:914317..916209+ >rna2112 ID=rna2112|Name=rna2112|organism=Nannochloropsis gaditana|type=CDS|length=1164bp|location=Sequence derived from alignment at CM002458.1:914317..916209+ (Nannochloropsis gaditana) ATGACGATTAAGCGAAAGGGGCTTTTGTCACCAAGATGTCCCGATGTTCA TGCTGCTGTTGTAGCGACAGACTGCTGTCATGCTAACACGGCGACTTCAG TGAAGCATGGTGGAGAGAAGCCTCCAGTAGTGTCCACGAGTGGTGACTTG CCAAAGTATGAGCCACGCGTTGCAGATGACGGAGTCCTCCACGGTGCTTG TCAAACAGAGATTAAGGCTCTGCGGGCGGAGGTTGAACTACTACGCAAGA AGCTTGACGCTGCATTAGGTGACATACCAGCATGCTCTATTTGCCTGGAA TGCGTTGACTATCCTGTAGAGCTGCAGGAGTGTCGGCACCTCTTCTGCTG TCAGTGCTTCTACATGTATGCCAAATGGAAAACTACTGGGAACATAGCAT GTCCTGCGTGTCGTACAACAGTATGTAAGGCACCGCTACCACCGCCTCTC GCCTTCATACAACATTTAGACGCGATAAAGGTTGCGAAGCGGCGACAACA AGAGGCGGTAAGGACGGGCGCAGACCCAGGACAAAGTCTCGAGGGAGGTA TATATAGAATTGACGCAAAAGCAGAAAGTCAGAGAAGAagcgaagaagaa agtgaACGCAAAGTAGGAGAGAAAATCAAATTGGaaagatggaaggaagg ggtaagCATGATGAAGTCACATGATGAGGAGAtaggagaggatgacgacc GCTCTGCTGCAGGTCTATTGGATCGTGCTGGCCCGTCGGggcaggcgcag gaggatAGGGAtatggaggcaaagaagactGCAGCTGCTACCGCCATTGC TGCTCGCCGTGCCCGTGCGGCGTACCAAGGCCAGATGGTCGAGTTGAAAG TCATGTTCGAGGCTGCAGAGCGCATGGGCGAGGGGGCTGTCGGGCTGAAT TCCTCCAGAAGAATACGGCCGCGTACAATAAGAAATGCAGAGATGGATGG AAGCACTCATCTCAACTACGATGAGTCTGACGGTGTGTACCGCTGCCTGA ACTGCCATTGGGAGGTGGATGAAGGGGGCCTGTGCGCCCGATGCCtccac gacgacgacgatgaagaggaggatgtagATGTAGCACATGTGTCGAGGAC GGATTTCTACCCACCGGGTCAGTTTGATTACGATAGCGATGAAGATGGGA CTTTGGATCGATGA back to top
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