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Properties
| Property Name | Value |
|---|
| Product | pyridoxal biosynthesis protein pdx2 |
| Orig transcript id | gnl|cribi|Naga_100009g76.579.mrna |
| Orig protein id | gnl|cribi|Naga_100009g76.579 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:853626..854987 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2084 ID=rna2084|Name=rna2084|organism=Nannochloropsis gaditana|type=mRNA|length=2514bp
GCCTTGGTGGTGTGGAAGGACAGCCAAAATATCGGCGGAGGACGTAGAAT
ACTCAGCGCTCAACGTCGACCAGGTAGATTCAACGCCTAATCCGCTCGTG
ACCACTGCTCCACAGGTACTCAAGTGTAGGGCGCAATAGGCACTTGACCA
TGTCAGTGCCGACAATCATCCAACGTTCTGGGTCGCTTGGGGGAAGTACG
CACGTTCCTTATTTCCGCAAGCCCGCATGTGCTTTGGGTGTCTTAATGAC
GGGCTATGTGGAAAAATTGGACCCCGACGCGTACTTGCCCAAGAGGCGAC
ACCGTTTTTTGGTTGCGACTCACCAGTCTCTGCACTGGTATGTGTAGGTG
TTCATTCTTGAATGTACGTTTAAAAAACGTCGACGACATAGCCTCATCAT
TTGACAACCCCTTGTATGTTTTCAAGGTTCAAGCGCGAAAAGGGCGTCGA
CCTGTTCGGCGAGGAAAGGGGTTCGGCTGCCCTGGCCGACATAAAGGAGA
CAGATCACTACAAGGGGGATGACAAGTCTTTCTACATCTTGTTGGAAGGC
GGTGATCGCCGAATCTTTTATGTTTCCACCCAAGAGGAGGCGACGAAGTG
GCTGCATTGTATCCAGACAGCCATCCGTTCCCGTTATCTCTACCGGCGGG
AGACCCTCTCCGGACTCTCCTTCATCCACACCGTAGAGGGTGAGGGGGAC
GGGATCACGCGGCCCCGTATCCTGTTCCTAACGCACTCATGCAATGTCTC
AGAGGACGGAAAGGAGGCGCGTGGGAAGGAGGTGGTCCTTTGTCGGCATG
TCGAGTATGAAAAGCGCTTGCCGTTGCCGCCCCTCCAAGGCGACGACGAG
CTGACCCTGACGCTGGTCAGTGGAGCCTGTGTGACCGCCAAGGGTTCGGA
CGTCCTGGCCCATGTGGAGGGCGCTGGCGAAGACGCCGAAAGGAAAAAGC
TCAAGCTTTGCTTCCGGGGAGGGAGTGGGGGGGCAGTGGTCGGGGCAGAG
CTCGTTCTGGACATCACGGCAGTGGAGGACTCGATTCCCGTGGCGGGGAG
GGAGGGCAAAGGGGAGGAGGAGAAAGACGCCAGCTCCTACCTTGGCGTTC
TGTACGCCCTGGCCGACGATGTGTTCCGGGTGGAGCATGGTATTCCCTTG
CTCTGCGCCACCTTTCTCGTCCTGGTCGTGTTGACCGAGGAGGGAAGGGT
CCTGTCACTGAGTGAAAGGATGTTGGACCGCCGCGCCGCCGCCATGATCT
TCGTGGCCGGCGGCTTGATCTTGCACGTCCTCATCTCCCTCTTCGGAGAA
GAGTCCGAGGCTTCAGAGGACCCTGCGGCGTTGGCCACGCCCATGGAAGG
AGGCGGCCGCCGTGGCATCTTCCTCGAGGTAGTGGACTACCTGCCCGCCA
AGCCGGTGATTGCGATGGGAGGGGAGGAGACGCAGGGGAAGGGATCGAGG
AATGGACGGGTGGGGACGCCGGGCTCTGTGATGGGGAGAGGGGCCGCAGA
CGAAGAAGAGCGACCGCTACCGCAGCGCTTTATTGATGGGTGTTTAGGAG
ACATGACCGAGGCGATGCGTCGTTGGAATTTGACGTGCGAGTGGCGACGA
GAATACGGCACCGATGGCATCCTGGATGAGCCTCAACCCTACTTCGACCT
GATCAAGCAGTGTTACCCCTCTTGGTACTGCGGCGAGGGGATAAATGGAG
ACCCTGTCTATTGGGAGAGATCGGGGCAAGTGGACCAACCGCGCATGCGG
GTGGCGGGCTGTGGCATCGACGAGCTGTTGCGGCACTACGTCATGGTCAC
AGAGTTCTGTTGGGTAAAGCTCTACCCCGATGAGACGAAAAAGACCATCA
CTGTTTTCTCCGTCGAAGGTGTTGGGATCCGCGATTTGGCCGGCGAGGCT
TTCGATTTTTTGCGGCGCTCGATACATTTGATTTCGGAACACTACCCAGA
GCGATCGGCTGTGATCATGATTACCAATGCGCCCTCGTGGTTCGCTGTAT
TGTGGAAAATAATCCGGCCGATGGTGAACGAGCGGACGCAAAAGAAAGTC
AAAATTGTCAGTAAAAAAGAAACCCTGGAATGCCTCAAAGAATTTATTCC
CGAGGAAAATATTCCTGTGGAATATGGAGGCAAGCTGCGCTTTGGGGATG
GGGTGGACACAGCCCGCTGGAAGTCACCCCAGGAGGTTGCCCTTCGAGAG
CATGTATTGGCGGTTAACAAAAAACATGGAGTTGAAATGGTAGTAGATGA
TAAAATGAAAGAGGCACAAGAAAAAGCAAAAGGGTAATTTGTACCAAATT
AGATCGGGATTTCGAGGCTCTGGCTGGGACATTGCGATTCTCGGATTTGG
GACATGCGAGATGGGATAGTATTTCTGCATATAATGGAGCAAAGGGAAGG
CAACAGCATTTGTAAGCAGACTTTTCATCATAATAGGGGACGGGTGCTAT
ATGTCGCATACTACTGTAACAATTGGACCAGACTCAAAGAAGGAGCGATA
AAAATGTAATAGGA back to topprotein sequence of rna2084 >rna2084-protein ID=rna2084-protein|Name=rna2084|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp
MAESVASGPCIGILALQGAFEEHRKIVQELGARTVEVRLPDDLDKDLDGL
IIPGGESTAMAIVGARHGIFPKLKAFVQGGKPIWGTCAGMILLSNRAIMQ
KAGGQPLIGGLDVEVCRNFFGSQVSSFEVLLQLEGAAAAGSLGSRGPVSA
VFIRAPAILEAGPGVEVLARVKATPCAQARHCVEEVYREQQKQREELLQR
EGRPSAPPPSVPTAASEDGARGRGRSGGEKTCMEREEDGRMEVVVAVQQG
HLLATAFHPELTPERWWHQYFMSMCSQQAQTASKK back to topmRNA from alignment at CM002458.1:853626..854987+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2084 ID=rna2084|Name=rna2084|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp|location=Sequence derived from alignment at CM002458.1:853626..854987+ (Nannochloropsis gaditana)
ATGGCAGAGTCAGTGGCATCTGGGCCCTGCATCGGTATCTTGGCTTTGCA
AGGGGCTTTTGAGGAGCATCGCAAAATTGTTCAGGAACTTGGGGCGCGAA
CGGTCGAGGTGAGAGTCAGGATGGTACATATTTTGACACCGTATCATGCC
CAAACTCCTGATGAGGGCTTTGAGGTATCATTTTGATAATATTTCCTCGG
TCATTACGTATTCCCAGCGCGTCGAGGTCATTAATGTACTCGAAATTCTC
AATATAAGCCATAGCTGGCATGATAGCTTGACGCATCTGTGGAAGTAAAT
GCAGTAATACCCTTAATCTCAAATAAAATTAGGTCAGGCTTCCAGACGAT
CTAGATAAGGATCTTGATGGACTAATAATTCCTGGTACGTCATCTGCTTT
CATGACTTACTTCTACTGATGTGTTGTCTATGCTCACTCATCATGTTCCT
TTTCTACATTGGTatgaaggcggggagagcaCGGCCATGGCCATTGTTGG
GGCACGTCATGGCATTTTCCCGAAGCTCAAAGCATTTgtacagggaggga
aaccgATATGGGGCACATGCGCCGGTATGATTTTGTTGTCCAACCGGGCC
ATCATGCAAAAAGCAGGAGGGCAACCTTTGATAGGCGGTCTGGACGTGGA
AGTTTGCCGCAACTTCTTTGGGAGCCAGGTAGGGCGAGGACAGGACACGG
CTGATGCGAAGGAACCGTCATGTCAATCCTTACCTTGCCCAACAATCACA
CGAAGGTATCCAGCTTTGAGGTCTTGCTGCAGCTGGAAGGGGCTGCGGCG
GCTGGTAGCCTCGGGTCGCGCGGTCCCGTGTCGGCAGTCTTTATCCGGGC
TCCCGCCATCCTAGAGGTGCGTCGAGATGTCAAGCGCCTTAAGCGTTGAC
GACGTGAGGAGACGGCCGGGTAAGCCTGTGGAATGGTTTTATTTTCACAA
TGAGCGACATACTTTCTGGTTTTCCCCCGATTAGGCCGGTCCGGGTGTGG
AGGTATTGGCCAGGGTGAAGGCTACCCCATGCGCTCAAGCCCGGCATTGT
GTGGAGGAAGTCTACAGGGAACAGCAAAAGCAGCGAGAGGAGCTGCTTCA
GCGTGAGGGCAGGCCATCGGCCCCGCCGCCATCGGTGCCAACCGCCGCGT
CGGAGGATGGagccagagggagggggcgatcggggggcgagaagacatgc
atggagagggaggaggacgggcggatGGAGGTGGTAGTGGCTGTACAGCA
AGGTCACTTGTTGGCTACGGCGTTTCATCCGGAGCTGACGCCCGAACGCT
GGTGGCACCAATATTTTATGTCCATGTGTAGTCAGCAGGCGCAGACCGCG
TCAAAGAAATAG back to topCoding sequence (CDS) from alignment at CM002458.1:853626..854987+ >rna2084 ID=rna2084|Name=rna2084|organism=Nannochloropsis gaditana|type=CDS|length=4290bp|location=Sequence derived from alignment at CM002458.1:853626..854987+ (Nannochloropsis gaditana)
ATGGCAGAGTCAGTGGCATCTGGGCCCTGCATCGGTATCTTGGCTTTGCA
AGGGGCTTTTGAGGAGCATCGCAAAATTGTTCAGGAACTTGGGGCGCGAA
CGGTCGAGGTCAGGCTTCCAGACGATCTAGATAAGGATCTTGATGGACTA
ATAATTCCTGgcggggagagcaCGGCCATGGCCATTGTTGGGGCACGTCA
TGGCATTTTCCCGAAGCTCAAAGCATTTgtacagggagggaaaccgATAT
GGGGCACATGCGCCGGTATGATTTTGTTGTCCAACCGGGCCATCATGCAA
AAAGCAGGAGGGCAACCTTTGATAGGCGGTCTGGACGTGGAAGTTTGCCG
CAACTTCTTTGGGAGCCAGGTATCCAGCTTTGAGGTCTTGCTGCAGCTGG
AAGGGGCTGCGGCGGCTGGTAGCCTCGGGTCGCGCGGTCCCGTGTCGGCA
GTCTTTATCCGGGCTCCCGCCATCCTAGAGGCCGGTCCGGGTGTGGAGGT
ATTGGCCAGGGTGAAGGCTACCCCATGCGCTCAAGCCCGGCATTGTGTGG
AGGAAGTCTACAGGGAACAGCAAAAGCAGCGAGAGGAGCTGCTTCAGCGT
GAGGGCAGGCCATCGGCCCCGCCGCCATCGGTGCCAACCGCCGCGTCGGA
GGATGGagccagagggagggggcgatcggggggcgagaagacatgcatgg
agagggaggaggacgggcggatGGAGGTGGTAGTGGCTGTACAGCAAGGT
CACTTGTTGGCTACGGCGTTTCATCCGGAGCTGACGCCCGAACGCTGGTG
GCACCAATATTTTATGTCCATGTGTAGTCAGCAGGCGCAGACCGCGTCAA
AGAAATAGATGGCAGAGTCAGTGGCATCTGGGCCCTGCATCGGTATCTTG
GCTTTGCAAGGGGCTTTTGAGGAGCATCGCAAAATTGTTCAGGAACTTGG
GGCGCGAACGGTCGAGGTCAGGCTTCCAGACGATCTAGATAAGGATCTTG
ATGGACTAATAATTCCTGgcggggagagcaCGGCCATGGCCATTGTTGGG
GCACGTCATGGCATTTTCCCGAAGCTCAAAGCATTTgtacagggagggaa
accgATATGGGGCACATGCGCCGGTATGATTTTGTTGTCCAACCGGGCCA
TCATGCAAAAAGCAGGAGGGCAACCTTTGATAGGCGGTCTGGACGTGGAA
GTTTGCCGCAACTTCTTTGGGAGCCAGGTATCCAGCTTTGAGGTCTTGCT
GCAGCTGGAAGGGGCTGCGGCGGCTGGTAGCCTCGGGTCGCGCGGTCCCG
TGTCGGCAGTCTTTATCCGGGCTCCCGCCATCCTAGAGGCCGGTCCGGGT
GTGGAGGTATTGGCCAGGGTGAAGGCTACCCCATGCGCTCAAGCCCGGCA
TTGTGTGGAGGAAGTCTACAGGGAACAGCAAAAGCAGCGAGAGGAGCTGC
TTCAGCGTGAGGGCAGGCCATCGGCCCCGCCGCCATCGGTGCCAACCGCC
GCGTCGGAGGATGGagccagagggagggggcgatcggggggcgagaagac
atgcatggagagggaggaggacgggcggatGGAGGTGGTAGTGGCTGTAC
AGCAAGGTCACTTGTTGGCTACGGCGTTTCATCCGGAGCTGACGCCCGAA
CGCTGGTGGCACCAATATTTTATGTCCATGTGTAGTCAGCAGGCGCAGAC
CGCGTCAAAGAAATAGATGGCAGAGTCAGTGGCATCTGGGCCCTGCATCG
GTATCTTGGCTTTGCAAGGGGCTTTTGAGGAGCATCGCAAAATTGTTCAG
GAACTTGGGGCGCGAACGGTCGAGGTCAGGCTTCCAGACGATCTAGATAA
GGATCTTGATGGACTAATAATTCCTGgcggggagagcaCGGCCATGGCCA
TTGTTGGGGCACGTCATGGCATTTTCCCGAAGCTCAAAGCATTTgtacag
ggagggaaaccgATATGGGGCACATGCGCCGGTATGATTTTGTTGTCCAA
CCGGGCCATCATGCAAAAAGCAGGAGGGCAACCTTTGATAGGCGGTCTGG
ACGTGGAAGTTTGCCGCAACTTCTTTGGGAGCCAGGTATCCAGCTTTGAG
GTCTTGCTGCAGCTGGAAGGGGCTGCGGCGGCTGGTAGCCTCGGGTCGCG
CGGTCCCGTGTCGGCAGTCTTTATCCGGGCTCCCGCCATCCTAGAGGCCG
GTCCGGGTGTGGAGGTATTGGCCAGGGTGAAGGCTACCCCATGCGCTCAA
GCCCGGCATTGTGTGGAGGAAGTCTACAGGGAACAGCAAAAGCAGCGAGA
GGAGCTGCTTCAGCGTGAGGGCAGGCCATCGGCCCCGCCGCCATCGGTGC
CAACCGCCGCGTCGGAGGATGGagccagagggagggggcgatcggggggc
gagaagacatgcatggagagggaggaggacgggcggatGGAGGTGGTAGT
GGCTGTACAGCAAGGTCACTTGTTGGCTACGGCGTTTCATCCGGAGCTGA
CGCCCGAACGCTGGTGGCACCAATATTTTATGTCCATGTGTAGTCAGCAG
GCGCAGACCGCGTCAAAGAAATAGATGGCAGAGTCAGTGGCATCTGGGCC
CTGCATCGGTATCTTGGCTTTGCAAGGGGCTTTTGAGGAGCATCGCAAAA
TTGTTCAGGAACTTGGGGCGCGAACGGTCGAGGTCAGGCTTCCAGACGAT
CTAGATAAGGATCTTGATGGACTAATAATTCCTGgcggggagagcaCGGC
CATGGCCATTGTTGGGGCACGTCATGGCATTTTCCCGAAGCTCAAAGCAT
TTgtacagggagggaaaccgATATGGGGCACATGCGCCGGTATGATTTTG
TTGTCCAACCGGGCCATCATGCAAAAAGCAGGAGGGCAACCTTTGATAGG
CGGTCTGGACGTGGAAGTTTGCCGCAACTTCTTTGGGAGCCAGGTATCCA
GCTTTGAGGTCTTGCTGCAGCTGGAAGGGGCTGCGGCGGCTGGTAGCCTC
GGGTCGCGCGGTCCCGTGTCGGCAGTCTTTATCCGGGCTCCCGCCATCCT
AGAGGCCGGTCCGGGTGTGGAGGTATTGGCCAGGGTGAAGGCTACCCCAT
GCGCTCAAGCCCGGCATTGTGTGGAGGAAGTCTACAGGGAACAGCAAAAG
CAGCGAGAGGAGCTGCTTCAGCGTGAGGGCAGGCCATCGGCCCCGCCGCC
ATCGGTGCCAACCGCCGCGTCGGAGGATGGagccagagggagggggcgat
cggggggcgagaagacatgcatggagagggaggaggacgggcggatGGAG
GTGGTAGTGGCTGTACAGCAAGGTCACTTGTTGGCTACGGCGTTTCATCC
GGAGCTGACGCCCGAACGCTGGTGGCACCAATATTTTATGTCCATGTGTA
GTCAGCAGGCGCAGACCGCGTCAAAGAAATAGATGGCAGAGTCAGTGGCA
TCTGGGCCCTGCATCGGTATCTTGGCTTTGCAAGGGGCTTTTGAGGAGCA
TCGCAAAATTGTTCAGGAACTTGGGGCGCGAACGGTCGAGGTCAGGCTTC
CAGACGATCTAGATAAGGATCTTGATGGACTAATAATTCCTGgcggggag
agcaCGGCCATGGCCATTGTTGGGGCACGTCATGGCATTTTCCCGAAGCT
CAAAGCATTTgtacagggagggaaaccgATATGGGGCACATGCGCCGGTA
TGATTTTGTTGTCCAACCGGGCCATCATGCAAAAAGCAGGAGGGCAACCT
TTGATAGGCGGTCTGGACGTGGAAGTTTGCCGCAACTTCTTTGGGAGCCA
GGTATCCAGCTTTGAGGTCTTGCTGCAGCTGGAAGGGGCTGCGGCGGCTG
GTAGCCTCGGGTCGCGCGGTCCCGTGTCGGCAGTCTTTATCCGGGCTCCC
GCCATCCTAGAGGCCGGTCCGGGTGTGGAGGTATTGGCCAGGGTGAAGGC
TACCCCATGCGCTCAAGCCCGGCATTGTGTGGAGGAAGTCTACAGGGAAC
AGCAAAAGCAGCGAGAGGAGCTGCTTCAGCGTGAGGGCAGGCCATCGGCC
CCGCCGCCATCGGTGCCAACCGCCGCGTCGGAGGATGGagccagagggag
ggggcgatcggggggcgagaagacatgcatggagagggaggaggacgggc
ggatGGAGGTGGTAGTGGCTGTACAGCAAGGTCACTTGTTGGCTACGGCG
TTTCATCCGGAGCTGACGCCCGAACGCTGGTGGCACCAATATTTTATGTC
CATGTGTAGTCAGCAGGCGCAGACCGCGTCAAAGAAATAG back to top
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