EWM28546.1, cds2070 (CDS) Nannochloropsis gaditana

Overview
NameEWM28546.1
Unique Namecds2070
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:833603..833615 +
Alignment locationCM002458.1:833723..834960 +
Alignment locationCM002458.1:835056..835070 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28546.1
Product60s acidic ribosomal protein p0
Orig transcript idgnl|cribi|Naga_100009g84.589.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:833603..833615 +
CM002458.1supercontigCM002458.1:833723..834960 +
CM002458.1supercontigCM002458.1:835056..835070 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0042254ribosome biogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P
Homology
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|585110964|gb|EWM28546.1| (60s acidic ribosomal protein p0 [Nannochloropsis gaditana])

HSP 1 Score: 869.381 bits (2245), Expect = 0.000e+0
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0
Query:    1 MLLRCHAVWHATHLSSTFTLRPQRPQRHRQLVKKGLSRFRNSFRQLRLPHFREHHFKKPLNNPLLKVTYISSHNQRAPSARAVKPLDLAHTSSLPLAIRRTMPVWNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGGGEGGAAPAAAQEEAKPAKEEEEEADIGAGNMFGGDGY 421
            MLLRCHAVWHATHLSSTFTLRPQRPQRHRQLVKKGLSRFRNSFRQLRLPHFREHHFKKPLNNPLLKVTYISSHNQRAPSARAVKPLDLAHTSSLPLAIRRTMPVWNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGGGEGGAAPAAAQEEAKPAKEEEEEADIGAGNMFGGDGY
Sbjct:    1 MLLRCHAVWHATHLSSTFTLRPQRPQRHRQLVKKGLSRFRNSFRQLRLPHFREHHFKKPLNNPLLKVTYISSHNQRAPSARAVKPLDLAHTSSLPLAIRRTMPVWNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGGGEGGAAPAAAQEEAKPAKEEEEEADIGAGNMFGGDGY 421          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|970661934|gb|KUF99358.1| (hypothetical protein AM588_10011112 [Phytophthora nicotianae])

HSP 1 Score: 412.149 bits (1058), Expect = 2.450e-140
Identity = 197/278 (70.86%), Postives = 233/278 (83.81%), Query Frame = 0
Query:  105 WNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAAS 382
             ++ +K +YFE++E LL +YTK+F+VGVDNVGS QMQQIR  LRG A VLMGKNT +RKV + F+KKNPGHP+EQ +  + GNVGFVFTN DL  +RE LE NRVPAPARVGS+AP +VIVPPGPTG DPGQTSFFQALQIATKI KGQIEI T V + ++G+KVGNSEA LLQKL+I PF+YGLVI+ +YDNGS+FDP VLDLT+ADL AKF   +RNVAA+SL+LG PTLAS+PHSIANAFK  VA+ V  EEFSFEKAEP+KA+L DPSAFA A+
Sbjct:    3 LSQERKLEYFEKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFHNFVKKNPGHPLEQFIPLLKGNVGFVFTNDDLAEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVLLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVECEEFSFEKAEPYKAFLADPSAFAVAA 280          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|695368921|ref|XP_009513921.1| (hypothetical protein PHYSODRAFT_353332 [Phytophthora sojae] >gi|348686832|gb|EGZ26646.1| hypothetical protein PHYSODRAFT_353332 [Phytophthora sojae])

HSP 1 Score: 408.297 bits (1048), Expect = 9.469e-139
Identity = 196/274 (71.53%), Postives = 230/274 (83.94%), Query Frame = 0
Query:  105 WNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAF 378
             ++ +K +YFE++E LL +YT++F+VGVDNVGS QMQQIR  LRG A VLMGKNT +RKV + F+KKNPGHP+EQ +  + GNVGFVFTN DL  +RE LE NRVPAPARVGS+AP +VIVPPGPTG DPGQTSFFQALQIATKI KGQIEI T V + ++G+KVGNSEA LLQKL+I PF+YGLVI+ +YDNGS+FDP VLDLT+ADL AKF   +RNVAA+SL+LG PTLAS+PHSIANAFK  VAV V  EEFSFEKAEPFKA+L DPSAF
Sbjct:    3 LSQERKLEYFEKLEALLENYTRIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFHNFVKKNPGHPLEQFIPLLKGNVGFVFTNDDLAEIREILESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVLLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGLPTLASIPHSIANAFKDLVAVAVECEEFSFEKAEPFKAFLADPSAF 276          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|325187541|emb|CCA22079.1| (60S acidic ribosomal protein P0 putative [Albugo laibachii Nc14])

HSP 1 Score: 407.142 bits (1045), Expect = 2.796e-138
Identity = 205/312 (65.71%), Postives = 249/312 (79.81%), Query Frame = 0
Query:  109 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGGGEGGAAPAAAQEEAKPAKEEEEEADIGAG-NMFGGD 419
            +K++YF R+E LL ++TK+F+V VDNV SKQMQQIRQ+LRG A +LMGKNT +RKV   FL+KNP HP+E +V  + GN+GFVFTN DL  +R  LE NRVPAPARVG++AP +V+VPPG TGCDPGQTSFFQALQIATKI KGQIEI + V ++KEG+KVGNSEA LLQKLNI PF+YGLV+ ++YDNGS+FDP VLDLT+ DL AKF   +RNVAA+SL++G PTLAS+PHSIANAFK+ VAV V  E +SFEKAEPFKAYL DPSAFA AS     G   A   ++ + A+ EEEE D+G G +MFG D
Sbjct:    7 RKQEYFVRLESLLETFTKIFLVSVDNVRSKQMQQIRQSLRGRAEILMGKNTLMRKVFGNFLRKNPNHPLEMVVPLIRGNIGFVFTNDDLNDIRSVLESNRVPAPARVGAVAPADVVVPPGSTGCDPGQTSFFQALQIATKIQKGQIEIVSEVLLIKEGEKVGNSEAALLQKLNINPFSYGLVLVSVYDNGSVFDPAVLDLTEEDLFAKFIAGLRNVAAVSLEIGIPTLASIPHSIANAFKSLVAVAVECETYSFEKAEPFKAYLADPSAFAVAS----SGQIEAGKDKKEEKAEVEEEEMDLGGGMDMFGAD 314          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|675192031|ref|XP_008904900.1| (hypothetical protein PPTG_11356 [Phytophthora parasitica INRA-310] >gi|566024773|gb|ETI47684.1| hypothetical protein F443_08148 [Phytophthora parasitica P1569] >gi|567962088|gb|ETK87619.1| hypothetical protein L915_07975 [Phytophthora parasitica] >gi|567990795|gb|ETL41017.1| hypothetical protein L916_07899 [Phytophthora parasitica] >gi|568020059|gb|ETL94197.1| hypothetical protein L917_07795 [Phytophthora parasitica] >gi|568050486|gb|ETM47425.1| hypothetical protein L914_07863 [Phytophthora parasitica] >gi|568094984|gb|ETN09754.1| hypothetical protein PPTG_11356 [Phytophthora parasitica INRA-310] >gi|570328451|gb|ETO76399.1| hypothetical protein F444_08202 [Phytophthora parasitica P1976] >gi|570952230|gb|ETP17487.1| hypothetical protein F441_08122 [Phytophthora parasitica CJ01A1] >gi|570986521|gb|ETP45519.1| hypothetical protein F442_08087 [Phytophthora parasitica P10297] >gi|970630215|gb|KUF77228.1| 60S acidic ribosomal protein P0 [Phytophthora nicotianae])

HSP 1 Score: 404.831 bits (1039), Expect = 2.701e-137
Identity = 193/272 (70.96%), Postives = 228/272 (83.82%), Query Frame = 0
Query:  105 WNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPS 376
             ++ +K +YFE++E LL +YTK+F+VGVDNVGS QMQQIR  LRG A VLMGKNT +RKV + F+KKNPGHP+EQ +  + GNVGFVFTN DL  +RE LE NRVPAPARVGS+AP +VIVPPGPTG DPGQTSFFQALQIATKI KGQIEI T V + ++G+KVGNSEA LLQKL+I PF+YGLVI+ +YDNGS+FDP VLDLT+ADL AKF   +RNVAA+SL+LG PTLAS+PHSIANAFK  VA+ V  EEFSFEKAEP+KA+L DPS
Sbjct:    3 LSQERKLEYFEKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFHNFVKKNPGHPLEQFIPLLKGNVGFVFTNDDLAEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVLLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVECEEFSFEKAEPYKAFLADPS 274          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|301095349|ref|XP_002896775.1| (60S acidic ribosomal protein P0 [Phytophthora infestans T30-4] >gi|262108658|gb|EEY66710.1| 60S acidic ribosomal protein P0 [Phytophthora infestans T30-4])

HSP 1 Score: 403.29 bits (1035), Expect = 1.106e-136
Identity = 192/272 (70.59%), Postives = 227/272 (83.46%), Query Frame = 0
Query:  105 WNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPS 376
             ++ +K +YF+++E LL +YTK+F+VGVDNVGS QMQQIR  LRG A VLMGKNT +RKV N F+KKNPGHP+E  +  + GNVGFVFTN DL  +RE LE NRVPAPARVGS+AP +VIVPPGPTG DPGQTSFFQALQIATKI KGQIEI T V + ++G+KVGNSEA LLQKL+I PF+YGLVI+ +YDNGS+FDP VLDLT+ADL AKF   +RNVAA+SL+LG PTLAS+PHSIANAFK  VA+ V  EEFSFEKAEP+KA+L DPS
Sbjct:    3 LSQERKLEYFDKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNNFVKKNPGHPLELFIPLLKGNVGFVFTNDDLSEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAMSLELGIPTLASIPHSIANAFKDLVAIAVECEEFSFEKAEPYKAFLADPS 274          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|635370236|emb|CCI41647.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 409.838 bits (1052), Expect = 2.164e-136
Identity = 190/276 (68.84%), Postives = 231/276 (83.70%), Query Frame = 0
Query:  109 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGG 384
            +K++YF R+E LL ++TK+F+V VDNV SKQMQQIRQ+LRG A +LMGKNT +RKV   FL+KNP HP+E +V  + GN+GFVFTN DL  +R  LE NRVPAPARVG++AP +V++PPG TGCDPGQTSFFQALQIATKI KGQIEI + V ++KEGDKVGNSEA+LLQKL+I PF+YGLV+ ++YDNGS+FDP VLDLT+ DL AKF   +RNVAA+SL++G PTLAS+PHSIANAFK+ VAV V  E +SF+KAEPFKAYL DPSAF  ASGG
Sbjct:    7 RKQEYFVRLESLLETFTKIFLVSVDNVRSKQMQQIRQSLRGRAEILMGKNTLMRKVFANFLRKNPNHPLEMVVPLIRGNIGFVFTNDDLNDIRAVLESNRVPAPARVGAIAPADVVIPPGSTGCDPGQTSFFQALQIATKIQKGQIEIVSEVLLIKEGDKVGNSEAVLLQKLSINPFSYGLVLVSVYDNGSVFDPAVLDLTEEDLCAKFVAGLRNVAAVSLEIGIPTLASIPHSIANAFKSLVAVAVECETYSFDKAEPFKAYLADPSAFVVASGG 282          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|1214701519|gb|OWZ13886.1| (60S acidic ribosomal protein P0, partial [Phytophthora megakarya])

HSP 1 Score: 399.438 bits (1025), Expect = 1.263e-135
Identity = 191/272 (70.22%), Postives = 225/272 (82.72%), Query Frame = 0
Query:  105 WNRAKKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPS 376
             ++ +K +YFE++E LL +YTK+F+VGVDNVGS QMQQIR  LRG   VLMGKNT +RKV + F+KKNPGHP+E  +  + GNVGFVFTN DL  +RE LE NRVPAPARVGS+AP +VIVPPGPTG DPGQTSFFQALQIATKI KGQIEI T V + K+GDKVGNSEA LLQKL+I PF+YGLVI+ +YDNGS+FDP VLDLT+ADL AKF   +RNVAA+SL LG PTLAS+PHSIANAFK  VA+ V  E+FSFEKA+P+KA+L DPS
Sbjct:    3 LSQERKLEYFEKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRGEVLMGKNTLMRKVFHNFIKKNPGHPLENFIPLLKGNVGFVFTNDDLTEIREVLESNRVPAPARVGSIAPVDVIVPPGPTGADPGQTSFFQALQIATKIQKGQIEIVTEVLLTKKGDKVGNSEAALLQKLDIKPFSYGLVIEQVYDNGSIFDPAVLDLTEADLCAKFVAGLRNVAAVSLALGLPTLASIPHSIANAFKDLVAIAVECEDFSFEKADPYKAFLADPS 274          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|1173940216|gb|OQR89707.1| (60S acidic ribosomal protein P0, partial [Thraustotheca clavata])

HSP 1 Score: 409.838 bits (1052), Expect = 5.176e-135
Identity = 202/308 (65.58%), Postives = 244/308 (79.22%), Query Frame = 0
Query:  109 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGGGEGGAAPAAAQEEAKPAKEEEEEADIGAGNMF 416
            +K +YF ++E LL +YTK+F+V VDNVGS Q+QQIR ALRG   VLMGKNT IRKV N ++KK PGHP+E L+  + GNVGFVFTNGDLG VR+ L++N+VPAPARVG++AP +V  P GPTGCDPGQTSFFQALQI+TKI KGQIEI +   + K+GDKVGNSEA LLQKLNI PF+YG++I T+YDNGS+FDP VLDLT+ DL AKF   +RNVAA+SL LG+PTLAS+PHSIANAFK  VAV +  E FSF+KA+PFKA+L DPSAFAAA+      A  AA    A   +E EEE D+GAG+MF
Sbjct:   19 RKGEYFIKLENLLNTYTKIFLVSVDNVGSNQIQQIRMALRGKGEVLMGKNTMIRKVFNNYIKKTPGHPLEALIPLLRGNVGFVFTNGDLGEVRQILDDNKVPAPARVGAVAPIDVFCPAGPTGCDPGQTSFFQALQISTKIQKGQIEIVSETLLTKKGDKVGNSEAALLQKLNIRPFSYGMIITTVYDNGSMFDPAVLDLTEDDLVAKFVGGLRNVAAVSLALGFPTLASIPHSIANAFKTLVAVAIECESFSFKKADPFKAFLADPSAFAAAA---APAAGGAAPAAAAAAKEESEEEMDVGAGDMF 323          
BLAST of EWM28546.1 vs. NCBI_GenBank
Match: gi|698781617|ref|XP_009823852.1| (hypothetical protein H257_02063 [Aphanomyces astaci] >gi|574121576|gb|ETV87053.1| hypothetical protein H257_02063 [Aphanomyces astaci])

HSP 1 Score: 398.667 bits (1023), Expect = 5.784e-135
Identity = 207/313 (66.13%), Postives = 246/313 (78.59%), Query Frame = 0
Query:  109 KKEDYFERVEELLGSYTKVFVVGVDNVGSKQMQQIRQALRGTATVLMGKNTRIRKVMNIFLKKNPGHPIEQLVNYVGGNVGFVFTNGDLGSVRETLEENRVPAPARVGSLAPCNVIVPPGPTGCDPGQTSFFQALQIATKITKGQIEITTAVQILKEGDKVGNSEAILLQKLNILPFTYGLVIQTIYDNGSLFDPKVLDLTDADLAAKFAVAVRNVAAISLQLGYPTLASLPHSIANAFKACVAVVVGLEEFSFEKAEPFKAYLKDPSAFAAASGGGEGGAAPAAAQEEAKPAKEEEEEADIGAGNMFGGDGY 421
            +K +YF ++E LL +Y K+F+V VDNVGS Q+QQIR ALRGTA VLMGKNT IRKV N F++KNPGHP+E L+  + GNVGFVFTNGDLG VRETLE N+VPAPARV ++AP +V  P GPTGCDPGQTSFFQALQI TKI KGQIEI   V + K G+KVGNSEA+LLQKLNI PF+YGL+I ++YDNGS+FDP VLDLT+ +L  KF   +RNVAA SL LG+PTLAS+PHS+ANAFK  VA+ V  E FSF+KA+PFKAYL DPSAFA+A+      A  AA    A    EE+EEAD+GAG+MFGG  Y
Sbjct:    7 RKGEYFIKLENLLETYNKIFLVSVDNVGSNQIQQIRIALRGTAEVLMGKNTMIRKVFNNFVRKNPGHPLEALIPALRGNVGFVFTNGDLGKVRETLEANKVPAPARVNAVAPVDVWCPAGPTGCDPGQTSFFQALQIGTKIQKGQIEIVADVLLTKAGEKVGNSEAVLLQKLNIRPFSYGLIIVSVYDNGSIFDPAVLDLTEDNLTQKFVAGLRNVAAFSLALGFPTLASIPHSLANAFKTLVAIAVESENFSFKKADPFKAYLADPSAFASAA---PAAAGGAAPAAAAAAPVEEDEEADVGAGDMFGGSDY 316          
The following BLAST results are available for this feature:
BLAST of EWM28546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110964|gb|EWM28546.1|0.000e+0100.0060s acidic ribosomal protein p0 [Nannochloropsis g... [more]
gi|970661934|gb|KUF99358.1|2.450e-14070.86hypothetical protein AM588_10011112 [Phytophthora ... [more]
gi|695368921|ref|XP_009513921.1|9.469e-13971.53hypothetical protein PHYSODRAFT_353332 [Phytophtho... [more]
gi|325187541|emb|CCA22079.1|2.796e-13865.7160S acidic ribosomal protein P0 putative [Albugo l... [more]
gi|675192031|ref|XP_008904900.1|2.701e-13770.96hypothetical protein PPTG_11356 [Phytophthora para... [more]
gi|301095349|ref|XP_002896775.1|1.106e-13670.5960S acidic ribosomal protein P0 [Phytophthora infe... [more]
gi|635370236|emb|CCI41647.1|2.164e-13668.84unnamed protein product [Albugo candida][more]
gi|1214701519|gb|OWZ13886.1|1.263e-13570.2260S acidic ribosomal protein P0, partial [Phytopht... [more]
gi|1173940216|gb|OQR89707.1|5.176e-13565.5860S acidic ribosomal protein P0, partial [Thrausto... [more]
gi|698781617|ref|XP_009823852.1|5.784e-13566.13hypothetical protein H257_02063 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2078rna2078Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications