EWM28604.1, cds2065 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|585111022|gb|EWM28604.1| (dna-directed rna polymerase iii subunit rpc3 [Nannochloropsis gaditana]) HSP 1 Score: 1416.36 bits (3665), Expect = 0.000e+0 Identity = 692/692 (100.00%), Postives = 692/692 (100.00%), Query Frame = 0 Query: 1 MVVSPHPGGVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEIWRDSDNRNGNLHKLGLIKEALVILLQHNLLVVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 MVVSPHPGGVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEIWRDSDNRNGNLHKLGLIKEALVILLQHNLLVVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF Sbjct: 1 MVVSPHPGGVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEIWRDSDNRNGNLHKLGLIKEALVILLQHNLLVVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|675201799|ref|XP_008909784.1| (hypothetical protein PPTG_14610 [Phytophthora parasitica INRA-310] >gi|566017463|gb|ETI40374.1| hypothetical protein F443_14215 [Phytophthora parasitica P1569] >gi|567983514|gb|ETL33904.1| hypothetical protein L916_13752 [Phytophthora parasitica] >gi|568043063|gb|ETM40367.1| hypothetical protein L914_13664 [Phytophthora parasitica] >gi|568090010|gb|ETN04847.1| hypothetical protein PPTG_14610 [Phytophthora parasitica INRA-310] >gi|570321138|gb|ETO69086.1| hypothetical protein F444_14234 [Phytophthora parasitica P1976] >gi|570944943|gb|ETP10200.1| hypothetical protein F441_14110 [Phytophthora parasitica CJ01A1] >gi|570976482|gb|ETP38287.1| hypothetical protein F442_14057 [Phytophthora parasitica P10297]) HSP 1 Score: 241.506 bits (615), Expect = 9.730e-67 Identity = 215/718 (29.94%), Postives = 323/718 (44.99%), Query Frame = 0 Query: 9 GVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEI---WRDSDNRNGNLHKLGLIKEALVILLQHNLL---VVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVD---VEDLVRKMILE----HYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGEL----SSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDV-----------------YCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 V + Q L L+I+ E FG V +++ +LR LAEI + + + + IK AL+ LLQHN+L VA P + P + Y +++ RLRFPKF+ A++ FG G+ +E V+ GR+ + + L + YN+A Q L DGE + A + + LVR+ +E Y+ RV PLDL P+ T A+ RG K + S + SK A A G G GK DE G+ AP SG PV + + A + ++ E + KK S A RG G+G T G+ G ++ DG E SL +WR GV Q RDLRH C+RF + +N A +V A+LQHS P ER+ P S P+S +L S + LPP L +L V D+ G V Y V + +I+E L+Q T H+ I+++Y G +ARI R+L++K+ L+ + + ELA++ + R RLY +Y D LL +QEIP+RADH+P TF+ W+ ++ Q+ +T+R+ LR RR+ E +E ++L+A E + + + FD+L+ +LDRLD+A+ +LD LML+ F Sbjct: 8 AVFATRSQRTLVLSIVREDFGDVAENVAEALLRSEGMRLAEIAHKLQRQTTASSSAPSVHEIKCALLKLLQHNVLDVTPVATP-------RGGSPAVAYNINVQEALYRLRFPKFIELAKETFGLEGEVVMEEVLVQGRVRMDQSLETMA------YNLAEQRRQEQKLKTQEDGEQATAAEEEEISEEELDECRHLVRETFVEMAKKRYISRVHPLDLKVAEPEE-TPDFPASIMRGQ----DKGSTSNLNSKSAVATAANGAG-NGSNANGKAADEDGITVRGKKR------KAPSPPSGNTVPVELQMMLDADEAARKEKDDSEAEWEPSSASSSTSSRGSKRKK--NSKRAKLPTRGTSSGDG--TTGGETSG-----------------EDAPDGSGAHTDERSL----------VWRFGVTQLLRDLRHKACIRFATENINAVAGVIVTAMLQHSAPREREKD--EPTSAPVSARDLFNMESVKNALPPEANNPWRL-LLNYIMVMCRDKSGMVMKVAQEAFDPTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKY--------GVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 658
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|568013000|gb|ETL87177.1| (hypothetical protein L917_13558 [Phytophthora parasitica]) HSP 1 Score: 241.121 bits (614), Expect = 1.420e-66 Identity = 215/718 (29.94%), Postives = 323/718 (44.99%), Query Frame = 0 Query: 9 GVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEI---WRDSDNRNGNLHKLGLIKEALVILLQHNLL---VVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVD---VEDLVRKMILE----HYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGEL----SSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDV-----------------YCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 V + Q L L+I+ E FG V +++ +LR LAEI + + + + IK AL+ LLQHN+L VA P + P + Y +++ RLRFPKF+ A++ FG G+ +E V+ GR+ + + L + YN+A Q L DGE + A + + LVR+ +E Y+ RV PLDL P+ T A+ RG K + S + SK A A G G GK DE G+ AP SG PV + + A + ++ E + KK S A RG G+G T G+ G ++ DG E SL +WR GV Q RDLRH C+RF + +N A +V A+LQHS P ER+ P S P+S +L S + LPP L +L V D+ G V Y V + +I+E L+Q T H+ I+++Y G +ARI R+L++K+ L+ + + ELA++ + R RLY +Y D LL +QEIP+RADH+P TF+ W+ ++ Q+ +T+R+ LR RR+ E +E ++L+A E + + + FD+L+ +LDRLD+A+ +LD LML+ F Sbjct: 8 AVFATRSQRTLVLSIVREDFGDVAENVAEALLRSEGMRLAEIAHKLQRQTTASSSAPSVHEIKCALLKLLQHNVLDVTPVATP-------RGGSPAVAYNINVQEALYRLRFPKFIELAKETFGLEGEVVMEEVLVQGRVRMDQSLETMA------YNLAEQRRQEQKLKTQEDGEQATAAEEEEISEEELDECRHLVRETFVEMAKKRYISRVHPLDLKVAEPEE-TPDFPASIMRGQ----DKGSISNLNSKSAVATAANGAG-NGSNANGKAADEDGITVRGKKR------KAPSPPSGNTVPVELQMMLDADEAARKEKDDSEAEWEPSSASSSTSSRGSKRKK--NSKRAKLPTRGTSSGDG--TTGGETSG-----------------EDAPDGSGAHTDERSL----------VWRFGVTQLLRDLRHKACIRFATENINAVAGVIVTAMLQHSAPREREKD--EPTSAPVSARDLFNMESVKNALPPEANNPWRL-LLNYIMVMCRDKSGMVMKVAQEAFDPTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKY--------GVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 658
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|567954846|gb|ETK80479.1| (hypothetical protein L915_13855 [Phytophthora parasitica]) HSP 1 Score: 240.736 bits (613), Expect = 2.438e-66 Identity = 214/718 (29.81%), Postives = 321/718 (44.71%), Query Frame = 0 Query: 9 GVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEI---WRDSDNRNGNLHKLGLIKEALVILLQHNLL---VVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDG---EAGSGATACADASVDVEDLVRKMILE----HYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGEL----SSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDV-----------------YCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 V + Q L L+I+ E FG V +++ +LR LAEI + + + + IK AL+ LLQHN+L VA P + P + Y +++ RLRFPKF+ A++ FG G+ +E V+ GR+ + + L + YN+A Q L DG A + + LVR+ +E Y+ RV PLDL P+ T A+ RG K + S + SK A A G G GK DE G+ AP SG PV + + A + ++ E + KK S A RG G+GT G+ G ++ DG E SL +WR GV Q RDLRH C+RF + +N A +V A+LQHS P ER+ P S P+S +L S + LPP L +L V D+ G V Y V + +I+E L+Q T H+ I+++Y G +ARI R+L++K+ L+ + + ELA++ + R RLY +Y D LL +QEIP+RADH+P TF+ W+ ++ Q+ +T+R+ LR RR+ E +E ++L+A E + + + FD+L+ +LDRLD+A+ +LD LML+ F Sbjct: 8 AVFATRSQRTLVLSIVREDFGDVAENVAEALLRSEGMRLAEIAHKLQRQTTASSSAPSVHEIKCALLKLLQHNVLDVTPVATP-------RGGSPAVAYNINVQEALYRLRFPKFIELAKETFGLEGEVVMEEVLVQGRVRMDQSLETMA------YNLAEQRRQEQKLKTQEDGEQATAAEEEEISEEELDECRHLVRETFVEMAKKRYISRVHPLDLKVAEPEE-TPDFPASIMRGQ----DKGSTSNLNSKSAVATAANGAG-NGSNANGKAADEDGITVRGKKR------KAPSPPSGNTVPVELQMMLDADEAARKEKDDSEAEWEPSSASSSTSSRGSKRKK--NSKRAKLPTRGTSS--GDGTTGGETSG-----------------EDAPDGFGAHTDERSL----------VWRFGVTQLLRDLRHKACIRFATENINAVAGVIVTAMLQHSAPREREKD--EPTSAPVSARDLFNMESVKNALPPEANNPWRL-LLNYIMVMCRDKSGMVMKVAQEAFDPTQARAGDGGQYVVHMQKIVEFLQQATTHAYIQDKY--------GVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 658
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|970635853|gb|KUF80646.1| (DNA-directed RNA polymerase III subunit RPC3 [Phytophthora nicotianae]) HSP 1 Score: 238.424 bits (607), Expect = 1.827e-65 Identity = 216/731 (29.55%), Postives = 329/731 (45.01%), Query Frame = 0 Query: 9 GVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEIWRD------SDNRNGNLHKLGL--------IKEALVILLQHNLL---VVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVD---VEDLVRKMILE----HYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGEL----SSRVQLPPNVTVK-----------------MYLEVLQN--DPVQIVDREGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 V + Q L L+I+ E FG V +++ +LR LAEI + + ++H++ + IK AL+ LLQHN+L VA P + P + Y +++ RLRFPKF+ A++ FG G+ +E V+ GR+ + + L + YN+A Q L DGE + A + + LVR+ +E Y+ RV PLDL P+ T A+ RG K + S + SK A A G G GK DE G+ P SG PV + + A + ++ E + KK S A RG G+G T G+ G ++ DG E SL +WR GV Q RDLRH C+RF + +N A +V A+LQHS P ER+ P S P+S +L S + LPP M ++V Q DP+Q +G Y V + +I+E L+Q T H+ I+++Y G +ARI R+L++K+ L+ + + ELA++ + R RLY +Y D LL +QEIP+RADH+P TF+ W+ ++ Q+ +T+R+ LR RR+ E +E ++L+A E + + + FD+L+ +LDRLD+A+ +LD LML+ F Sbjct: 8 AVFATRSQRTLVLSIVREDFGDVAENVAEALLRSEGMRLAEIAHKLQRQTTASSSAPSVHEILICCYAAGMKIKCALLKLLQHNVLDVTPVATP-------RGGSPAVAYNINVQEALYRLRFPKFIELAKETFGLEGEVVMEEVLVQGRVRMDQSLETMA------YNLAEQRRQEQKLKTQEDGEQATAAEEEEISEEELDECRHLVRETFVEMAKKRYISRVHPLDLKVAEPEE-TPDFPASIMRGQ----DKGSTSNLNSKSAVATAANGAG-NGSNANGKAADEDGITVRGKKR------KXPSPPSGNTVPVELQMMLDADEAARKEKDDSEAEWEPSSASSSTSSRGSKRKK--NSKRAKLPTRGTSSGDG--TTGGETSG-----------------EDAPDGSGAHTDERSL----------VWRFGVTQLLRDLRHKACIRFATENINAVAGVIVTAMLQHSAPREREKD--EPTSAPVSARDLFNMESVKNALPPEANNPWRLLLNYIMVMCRDKSGMVMKVAQEAFDPIQARAGDGGQ---YVVHMQKIVEFLQQATTHAYIQDKY--------GVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARVTERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 669
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|953491912|emb|CEG45489.1| (dna-directed rna polymerase iii subunit rpc3 [Plasmopara halstedii]) HSP 1 Score: 230.72 bits (587), Expect = 6.257e-63 Identity = 197/727 (27.10%), Postives = 331/727 (45.53%), Query Frame = 0 Query: 2 VVSPHPGGVSSANQQYKLALNILNEHFGPVVQDIGSYILRRGRCTLAEI----WRDSDNRNGNLHKLGLIKEALVILLQHNLLVVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGS--GDGEAGSGATACADASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIG---RSLGAEEGVA--------APYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERD---GTVAPPRSQPLSLGELSSRVQLP-----PNVTVKMYLEVLQNDPVQIVDR---------EGTATD--VYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 ++S + +S +Q+ L ++I+ E FG V + + +LR LAEI R++ + L + IK AL+ LLQHN+L V D P + Y+++++ RLRFPKF+ A++ FG G+ +E ++ GR+ + + + + YN+A Q + G E G + V D+ +M + Y+ RV PL+L + + V + T G+ G L +E+ L G +S G+ +G++ +P + SG PV + + A + +R E + G SK+ G GGE G + + G DE + ++WR G+ Q RDLRH TC+RF + +N A +V A+LQHS P ER+ T AP ++ L E S + LP P + Y+ V+ D ++ + + A+D Y V + +I+E L+Q T+H+ I+++Y G +ARI R+L++K+ L+ + + ELA++ + R RLY +Y D L+ +QEIP+RADH+P TF+ W+ ++ Q+ +T+R+ LR RR+ E +E ++L+A E + + ++ FD+L+ +LDRLD+A+ +LD LMLF F Sbjct: 1 MISENKAAFASHSQR-ALVMSIVREDFGDVAEKVAETLLRSEGLRLAEIVHKLQRETTTTSAVL-SMHEIKCALLKLLQHNVLDVKPVRGD-------TPAVSYKINVEEALYRLRFPKFIELAKETFGVEGEVVMEELLVQGRMRMDQSIETMA------YNLAEARRQEQKVQAQEGGTVEDEIGEDELDECRYLVRDVFVEMAKKRYISRVHPLELKLTEAEEVPVVSS-------------------------TSNGQDDSTTGILRATSNNNEM-HLNAGNTSKSTGSSDGISVRGKKRKVSP-LPSGNTIPVELQMMLDADEASRREKEDSEAEWTPSSASSSRGIKRKKSKRAKLPTRGASNKDGNTGGETSGEDAPEVSG--------------THTDETS---------------------LVWRFGMTQMLRDLRHKTCIRFASENINAVAGVIVEAMLQHSSPREREKDEATSAPVSARDLFNME-SVKKALPSESNNPWRLLLNYITVMCRDKSGMIMKVAQEAFDPTKARASDGGQYVVHMQKIVEFLQQATVHAYIQDKY--------GVASARIVRLLMEKRQLEQKSIGELALLPSNDARHRLYELYTDKLVKLQEIPKRADHNPAFTFFCWSVDVLQMQTRITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEALDIDKFDKLSRSLDRLDRAIIHLDGMLMLFRDF 641
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|695391245|ref|XP_009519965.1| (hypothetical protein PHYSODRAFT_487168, partial [Phytophthora sojae] >gi|348684862|gb|EGZ24677.1| hypothetical protein PHYSODRAFT_487168, partial [Phytophthora sojae]) HSP 1 Score: 212.616 bits (540), Expect = 1.499e-56 Identity = 194/659 (29.44%), Postives = 295/659 (44.76%), Query Frame = 0 Query: 67 IKEALVILLQHNLLVVAMPTSDEMLRKHTKPLIYYQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATV----ADHTQTLMGSGDGEAGSGATACADASVDVEDLVRKMILE----HYLVRVLPLDLVTPSPDALTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIGRSLGAEEGVAAPYVSSGGEGPVGGPLSI----LARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGEL----SSRVQLPPNVTVKMYLEVLQNDPVQIVDREGTATDV-----------------YCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 IK AL+ LLQHN+L V P + + P + Y +++ RLRFPKF+ A++ FG G+ +E ++ GR+ + + L + YN+A T + A + + LVR+ +E Y+ RV PLDL P+ A + A S + + + + EAG G GK DE G+ AP SSG PV + + ARK E A+ +G G +K+ S A RG G+G T G+ G ++ DG E SL +WR GV Q RDLRH C+RF + +N A +V A+LQHS P ER+ P S P+S +L S + LPP L +L V D+ G V Y V + +I+E L+Q T H+ I+++Y G +ARI R+L++K+ L+ + + ELA++ + R RLY +Y D LL +QEIP+RADH+P TF+ W+ ++ Q+ +T+R+ LR RR+ E +E ++L+A E + + + FD+L+ +LDRLD+A+ +LD LML+ F Sbjct: 3 IKCALLKLLQHNVLDVT-PVAGA---RGGAPTVAYNINVQEALYRLRFPKFIELAKETFGVQGEVVMEEMLVQGRVRMDQSLETMA------YNLAEQRRQEQKQTAQEADAEQAAAAEDEEIGEEELDECRHLVRETFVEMAKKRYISRVHPLDLKVAEPEEAPEFPACIMRGHEKGATSNLNSKSAAAAASNAEAGSALSANGVNKNGKAADEDGITVRGKKR------KAPAPSSGNAIPVELQMMLDADEAARKEKDDSEAEWEPSSASSSTSSGRG-----NKRKKNSKRAKLPSRGTSSGDG--TTGGETSG-----------------EDAPDGSGAHTDERSL----------VWRFGVTQLLRDLRHKACIRFATENINAVAGVIVAAMLQHSSPREREKD--EPTSFPVSARDLFDMESVKKALPPEANNPWRL-LLNYIMVMCRDKSGMVMKVAQEAFDPTQTRAGDGGQYVVHMQKIVEFLQQATTHAYIQDKY--------GVASARIVRLLMEKRQLEQKTIGELALLPSNDARHRLYELYTDKLLKMQEIPKRADHNPAFTFFCWSVDVPQMQARITERVQDSLCRLRRRRKFEAEENKELIARSEQLVEANDLDKFDKLSRSLDRLDRAIIHLDGMLMLYRDF 600
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|635366256|emb|CCI45447.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 174.481 bits (441), Expect = 9.786e-43 Identity = 158/622 (25.40%), Postives = 274/622 (44.05%), Query Frame = 0 Query: 102 QMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDA--LTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIG-RSLGAEEGVAA-----PYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSS----RVQLPPNV--TVKMYLEVLQNDPVQIVDREGTATDV-----------------YCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 Q+D+ V R+ FP+F+ +A++ FG+ G+ +E ++ +GR+ + + + + Y +A + S + + D V +M Y+ RV P+ +V ++ + S+ + RG+ A +Q G + ++ EI SLG E G+A VS G PV + + +++ ++E + A D N F S+ + R P GT+ +A + SD G+ + E D K+ V WR G +Q R+LRH +RF + VN A +V A+L +S+ ER+ P S P++ E+ + LP + T ++ L L V + D+ G T V Y V + I + L+Q T+H+ I++++ G ++ARI R++L+K+ L+ + + ELA++ L E R RLY +Y D L+ +QEIP+R+DH+P T Y W+ N + + +R+ LR RR KE ++L+A + ++ + FD+L+ LDRLD+++ LD LML+ F Sbjct: 119 QIDISEVLYRIHFPRFINQAKKKFGDAGEIIMEEILVNGRIRMDESVEVMA------YRLAECRQKKE----SNEDASSIPERELRDCREAVNFKFVEMAKNRYISRVHPVKMVLNQQESKSIDSLAEKPSNRGNHA------------------------KQVG------SNNMIRPEISTESLGDEHGIAVRVKKEKKVSRGSNLPVELMMLLESQE-----MSMNEAAEEAEYDVASNPFAKKRSR-------LSKRARLPK----HGTKPHEAHTE-------SDTNGLQSTNTEMDEKSLV-----------------WRCGTDQLLRELRHDAFVRFAMENVNHVAGVIVSAMLSYSMSHERESN--EPTSFPMTAREIYKVDEVKQALPKEIKDTWRLLLNYL---AVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKF--------GVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIARSSQLVEENDLEKFDKLSQGLDRLDRSILQLDENLMLYRDF 647
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|635366255|emb|CCI45446.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 174.096 bits (440), Expect = 1.053e-42 Identity = 158/623 (25.36%), Postives = 274/623 (43.98%), Query Frame = 0 Query: 101 YQMDLDAVTMRLRFPKFLLRARQLFGEGGQAAVEAVMRHGRLPLSKILAQVGESYKARYNIATVADHTQTLMGSGDGEAGSGATACADASVDVEDLVRKMILEHYLVRVLPLDLVTPSPDA--LTSVGAAAAARGSRAAASKAAASAVLSKGAETEAGKKRGRQGGLGGGKEGDEIVSLEIG-RSLGAEEGVAA-----PYVSSGGEGPVGGPLSILARKRFKRRSGVDEGHKAAGIDENGNGFHPGPSKKVVGSGEAWEGVRGPGGGEGEGTETGQAEGKFPTGRRRSDLEGIVEEDEEADGKTWVGGEESLAEWVGAGDEVLWRVGVEQFHRDLRHVTCLRFVRQKVNTTAESLVRAILQHSLPLERDGTVAPPRSQPLSLGELSS----RVQLPPNV--TVKMYLEVLQNDPVQIVDREGTATDV-----------------YCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIRDDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 Y +D+ V R+ FP+F+ +A++ FG+ G+ +E ++ +GR+ + + + + Y +A + S + + D V +M Y+ RV P+ +V ++ + S+ + RG+ A +Q G + ++ EI SLG E G+A VS G PV + + +++ ++E + A D N F S+ + R P GT+ +A + SD G+ + E D K+ V WR G +Q R+LRH +RF + VN A +V A+L +S+ ER+ P S P++ E+ + LP + T ++ L L V + D+ G T V Y V + I + L+Q T+H+ I++++ G ++ARI R++L+K+ L+ + + ELA++ L E R RLY +Y D L+ +QEIP+R+DH+P T Y W+ N + + +R+ LR RR KE ++L+A + ++ + FD+L+ LDRLD+++ LD LML+ F Sbjct: 98 YYIDISEVLYRIHFPRFINQAKKKFGDAGEIIMEEILVNGRIRMDESVEVMA------YRLAECRQKKE----SNEDASSIPERELRDCREAVNFKFVEMAKNRYISRVHPVKMVLNQQESKSIDSLAEKPSNRGNHA------------------------KQVG------SNNMIRPEISTESLGDEHGIAVRVKKEKKVSRGSNLPVELMMLLESQE-----MSMNEAAEEAEYDVASNPFAKKRSR-------LSKRARLPK----HGTKPHEAHTE-------SDTNGLQSTNTEMDEKSLV-----------------WRCGTDQLLRELRHDAFVRFAMENVNHVAGVIVSAMLSYSMSHERESN--EPTSFPMTAREIYKVDEVKQALPKEIKDTWRLLLNYL---AVMVRDKSGMLTRVAAEKADATTTQGGDGGQYVVHMKNITDYLKQATMHAYIQDKF--------GVQSARIVRLILEKRQLEQKSIGELALLPLNEARRRLYDLYRDKLIHLQEIPKRSDHNPVHTMYTWSVNTFHIERVIRERVQDSICKLRSRRDFIAKENKELIARSSQLVEENDLEKFDKLSQGLDRLDRSILQLDENLMLYRDF 627
BLAST of EWM28604.1 vs. NCBI_GenBank
Match: gi|298707347|emb|CBJ29991.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 159.844 bits (403), Expect = 4.765e-40 Identity = 101/298 (33.89%), Postives = 152/298 (51.01%), Query Frame = 0 Query: 413 DEVLWRVGVEQFHRDLRHVTCLRFVRQKV--NTTAESLVRAILQHSLPLER--DGTVAPPRS---------QPLSLGELSSRVQLPPNVTVKMYLEVLQNDPVQIVDR---EGTATDVYCVCLGRIIESLRQRTLHSIIRERYTTDSKACDGDRNARICRVLLDKKYLDPQQVSELAMMSLRETRERLYRMYADLLLTVQEIPRRADHHPNQTFYLWTFNMQQVVEELTQRMYKGALNLRLRRQKETKEKRDLLANKENIR--DDVEAAHFDQLTTTLDRLDQALENLDATLMLFTVF 692 D VLW++G ++FHRD R++ L V+ + + A +V+ +L +S P ER D V+ S + L+ +P ++ L D +V + T Y V + ++++ +R + R+RY G ARI +LL KYLD QQV E+AM+ + RERLYR+ D +++VQE+P+RAD +PN TFYLWT QV + + + +YK LN+RLRR+ + L + R +D E DQ+ +LDRLD AL LD LM F F Sbjct: 35 DSVLWKLGFDKFHRDFRNLALLGLVQDRFPKSKLAYLVVKVMLDNSSPTERKVDEQVSASISARDLFDKLCEAWQTNNLTKNKAVPDWRRFVSWMSALCTDLTSMVSKIPGSDTQNPRYVVNMAKMVQYIRGNLVKCTARDRY--------GKETARIMEILLQNKYLDQQQVGEMAMIPPSDARERLYRLVRDRMVSVQEVPKRADRNPNTTFYLWTIKHDQVAQVVLESLYKAMLNMRLRRKFVYSNDKALFIHDAAARLSNDAERERLDQVRRSLDRLDTALLRLDENLMFFNTF 324 The following BLAST results are available for this feature:
BLAST of EWM28604.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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