EWM28655.1, cds2022 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|585111076|gb|EWM28655.1| (unidentified vitellogenin-linked transcript family member (uvt-5) [Nannochloropsis gaditana]) HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0 Query: 1 MSRPVARKGIANGEIIGPSSRAEHAFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHMAKNVT 305 MSRPVARKGIANGEIIGPSSRAEHAFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHMAKNVT Sbjct: 1 MSRPVARKGIANGEIIGPSSRAEHAFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHMAKNVT 305
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|553195517|ref|XP_005856162.1| (unidentified vitellogenin-linked transcript family member (uvt-5), partial [Nannochloropsis gaditana CCMP526] >gi|422292900|gb|EKU20201.1| unidentified vitellogenin-linked transcript family member (uvt-5), partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 378.637 bits (971), Expect = 6.454e-131 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0 Query: 98 ENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEP 278 ENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVAT VKILHFSSSPKPWEP Sbjct: 1 ENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATHVKILHFSSSPKPWEP 181
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|298710190|emb|CBJ26265.1| (Glycosyltransferase, family GT8 [Ectocarpus siliculosus]) HSP 1 Score: 265.003 bits (676), Expect = 3.782e-85 Identity = 137/274 (50.00%), Postives = 178/274 (64.96%), Query Frame = 0 Query: 29 LLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENS-HVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHMA 301 ++T+D F GA+V+LHSLR + RP +VV+VT +S+ R+ L+ DE++ VEPIA P + HV WVD G+TKL++WGL QF VVY+DAD LV+ED+ ELF +VDFAAAPD+FPPD+FNAGVM+V P+L V EDM+ V+ LPSYDGGDTGFLNA+F W+S P + ARLPF +NA RT++W TH PGYW A+ VKI+HF SSPKPWE +KG+LE+ WW +V+M M Sbjct: 1 MVTSDDFVIGAEVMLHSLREHCGGSTR----RPALVVMVTSGVSQLKRQALKAVSDEVIEVEPIAMPMKRAAGHVPAWVDVGYTKLRVWGLIQFRCVVYIDADALVMEDLDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVE--ELPSYDGGDTGFLNAYFADWFSRP-----------------------AAARLPFAYNALRTVYWTTHEKNPGYWEAIGP-VKIIHFCSSPKPWEE--TNRKGDLEMTWWQRYVQMKMG 242
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|873221008|emb|CEM34465.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 222.246 bits (565), Expect = 4.613e-68 Identity = 132/286 (46.15%), Postives = 170/286 (59.44%), Query Frame = 0 Query: 25 AFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERT------RKGLEGFCDELLTVEPIANPYAEN-SHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFS-ADVDFAA-APDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWG-AVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHM 300 A++TLLT+DSF G + L SLR + + +VLV P++SERT RKG+E ++ V+ IANP+AE H GWV+SGFTKL +W LT+F+RVVY+DADC+V+ I LF A V A APD+FPPDRFNAGVM++ P+L VYED+L K L SYD GDTGFLNA+F WY + RL F +NAQRT+HWMTH+ PGYW V + +LH SSSPKPWE +KG E WW ++M++ Sbjct: 15 AYITLLTSDSFAIGVETLAFSLRKTGTPHP--------FIVLVGPQVSERTFKRLSERKGVE----DVRRVDGIANPHAEEGCHEPGWVNSGFTKLHVWSLTEFQRVVYIDADCIVMRKIDCLFDPAAVSCPAFAPDVFPPDRFNAGVMVIEPSLAVYEDLL--AKRTVLRSYDRGDTGFLNAYFSGWYGWD-----------------------AKHRLAFHYNAQRTMHWMTHSKQPGYWDECVLPCLSVLHLSSSPKPWESPD--RKGPTEWLWWNMHIQMNI 261
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|325185151|emb|CCA19642.1| (Glycosyltransferase putative [Albugo laibachii Nc14] >gi|325188541|emb|CCA23074.1| Glycosyltransferase putative [Albugo laibachii Nc14]) HSP 1 Score: 212.231 bits (539), Expect = 2.313e-64 Identity = 114/289 (39.45%), Postives = 168/289 (58.13%), Query Frame = 0 Query: 24 HAFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAEN------------SHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHM 300 A+ T++T+D F G + LL+S + S+ + ++L T ++S+R L F + L E I ++ SHV W++S +TKL I+GL +++++VY+DAD L++ +I ELF D FAAAPDIFPPDRFNAGV++++P DV+E++L KA + SYDGGDTGFLN F W+ Q+ + +RLPF +NAQRT++WM ++ PGYW AV +KILHFSSSPKPWE + G+LE+ WW + + + Sbjct: 2 QAYATMITSDDFQMGVEALLYSWSCTHSSIN--------FLILYTSQVSKRVLDKLHRFLETLRMSERIKWMRVDSIPIPASSSDPPSSHVESWLNSAYTKLNIFGLEEYQKIVYIDADALILTNIDELFEMDTSFAAAPDIFPPDRFNAGVLVIKPGKDVFENLL--AKAKTIKSYDGGDTGFLNLVFSDWF-----------------------QRDAASRLPFRYNAQRTMYWMVNSKNPGYWKAVEP-LKILHFSSSPKPWEEPN--RIGDLEMIWWMYYTKAQI 254
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|403336458|gb|EJY67427.1| (Glycosyltransferase, family GT8 (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 207.608 bits (527), Expect = 1.325e-62 Identity = 109/276 (39.49%), Postives = 164/276 (59.42%), Query Frame = 0 Query: 29 LLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLT-VEPIANPY--AENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATR---VKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEM 298 ++T D + PG QVL ++LR S ++V+++ + + T ++ + ++ V+PI NP+ ++ + S WV SG+TKL IW L QF++V Y+DADCL+ + + F + DFAAAPD+FPPDRFNAGV+L++P++ V+ DM+ K P+YDGGDTGFLNA++P WY K S +RLP+ +NAQRTL+W T GYW + + I+H+SSSPKPW + KG+LE+ W+ T++EM Sbjct: 1 MITDDGYLPGLQVLHYTLRKFTSR---------LLVIILAENVKKITEMQIKKLSNVMIKRVKPILNPHEKSQTDNASSWVGSGYTKLYIWTLIQFQKVFYIDADCLISSNPENAFDRNSDFAAAPDVFPPDRFNAGVLLIKPSMTVFRDMIS--KILTFPAYDGGDTGFLNAYYPDWY-----------------------LKDSDSRLPYGYNAQRTLYWFTIKRTDGYWKEIINSKEGLVIIHYSSSPKPWVGQ---PKGDLELLWFQTYMEM 239
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|635372360|emb|CCI39581.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 198.749 bits (504), Expect = 8.052e-60 Identity = 95/207 (45.89%), Postives = 140/207 (67.63%), Query Frame = 0 Query: 91 PIANPYAENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVE 297 P N +HV+ W++S +TKL I+GL +++++VY+DAD L++ +I ELF D +FAAAPDIFPPDRFNAGV++V+P+ +V++++L KA A+ SYDGGDTGFLN FP W+ ++ +++RL F +NAQRT+HW+ ++ PGYW A+ +KILHFSS+PKPW E ++ GELE+ WWT + + Sbjct: 16 PAYNADPPEAHVTSWLNSAYTKLHIFGLKEYQKIVYIDADALILTNIDELFDLDTNFAAAPDIFPPDRFNAGVLVVKPDYNVFQELL--AKARAVKSYDGGDTGFLNLVFPDWF-----------------------ERDAISRLHFRYNAQRTMHWLVNSKNPGYWEALKP-LKILHFSSNPKPW--EETKRIGELEMTWWTYYTK 194
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|1129190228|gb|OLP95499.1| (putative glucuronosyltransferase PGSIP6 [Symbiodinium microadriaticum]) HSP 1 Score: 211.46 bits (537), Expect = 4.319e-58 Identity = 125/273 (45.79%), Postives = 165/273 (60.44%), Query Frame = 0 Query: 26 FVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCD-ELLTVEPIANPYAENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVE 297 F TLLT+D F Q L SLR + P++V L T ++S + L +L V+ I NP+ + VSGWV+SGFTKL++W FE++VY+DADC+V+E+I ELF A A PD+FPPD+FNAGV+++ PNL V++DM+ K LPS+DGGDTGFLNAFFP WY P P + RLPF +NA RT++W THA PGYW +V VK+LHF SSPKPW+ E KKG+LE WW +++ Sbjct: 1187 FATLLTSDDFLMAVQALAASLRACT------LQTLPLLV-LHTSQVSRGAQSRLATDPSVQLRLVDAIPNPH--KTDVSGWVNSGFTKLRLWEQVDFEKIVYVDADCIVLENIDELF-AHACPAFCPDVFPPDKFNAGVIVLEPNLSVFQDMMD--KMLVLPSHDGGDTGFLNAFFPDWYLWP-------------------PDQ----RLPFRYNALRTMYWFTHA-NPGYWESVQP-VKVLHFCSSPKPWDKEA--KKGDLEALWWEHYLK 1420
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|551671212|ref|XP_005838363.1| (hypothetical protein GUITHDRAFT_65972, partial [Guillardia theta CCMP2712] >gi|428182523|gb|EKX51383.1| hypothetical protein GUITHDRAFT_65972, partial [Guillardia theta CCMP2712]) HSP 1 Score: 187.963 bits (476), Expect = 1.198e-55 Identity = 98/205 (47.80%), Postives = 126/205 (61.46%), Query Frame = 0 Query: 102 VSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPG------YWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHM 300 + W SG+TKL IW LT+F ++VY+DADCLV+E I +LFS + FAAAPD FPPDRFNAGV++V P+L+V+EDM+ + G + SYDGGDTGFLN++F W++ G S RLPF +NA RT++W+T PG YW AV V+ LHF S PKPW+ KGELE KWW F E + Sbjct: 1 IDAWDQSGYTKLNIWKLTEFSKLVYVDADCLVMESIDDLFSRETRFAAAPDTFPPDRFNAGVLVVEPSLEVFEDMISRI--GVMHSYDGGDTGFLNSYFHDWFT-----MGEAS------------------RLPFRYNALRTMYWLTQK-KPGQPAGYSYWNAVGA-VRCLHFCSFPKPWDQRLQAPKGELEQKWWVAFAECQL 178
BLAST of EWM28655.1 vs. NCBI_GenBank
Match: gi|676382965|ref|XP_009034761.1| (hypothetical protein AURANDRAFT_6116, partial [Aureococcus anophagefferens] >gi|323454433|gb|EGB10303.1| hypothetical protein AURANDRAFT_6116, partial [Aureococcus anophagefferens]) HSP 1 Score: 187.578 bits (475), Expect = 3.707e-55 Identity = 106/251 (42.23%), Postives = 148/251 (58.96%), Query Frame = 0 Query: 25 AFVTLLTTDSFGPGAQVLLHSLRTSISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENSHVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKP 275 A+ T++T D + PGA LL SLR S SAK + +VLVT ++SER+R+ L ++ VEPI NP+ W G+TKL +WGLT++ ++VY+DAD +V+E++ ELF+ DV FAAAPDIFPPD+FN+GVM++ P+ + ++ ML+ S+DGGD GFLN FF W+ P+ RL F +N QRTLH HA G+W V +K+LHF+S PKP Sbjct: 2 AYATVITNDGYAPGALALLQSLRASRSAKPR--------LVLVTSDVSERSRRLLRRLA-TVVDVEPIPNPHTPLDGKECWARCGYTKLALWGLTEYTKLVYVDADAVVLENVDELFALDVAFAAAPDIFPPDKFNSGVMVLAPSKETFDAMLKVAPDAR--SHDGGDGGFLNEFFDDWFEGPVA-----------------------GRLAFRYNCQRTLHRFMHAHNAGFWD-VCKPIKVLHFASVPKP 217 The following BLAST results are available for this feature:
BLAST of EWM28655.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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