EWM28645.1, cds2021 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|585111066|gb|EWM28645.1| (4fe-4s ferredoxin iron-sulfur binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 801.586 bits (2069), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 Query: 1 MLKWSLWIVWLPFLVLSRPTFLHSFSKANYMWSSLLPFSKSRAMPLLCASTQQNSRDLTDLTDLRSLLTEAVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAEQVLEAVPYQVEAADVLTSLAGRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIKKR 396 MLKWSLWIVWLPFLVLSRPTFLHSFSKANYMWSSLLPFSKSRAMPLLCASTQQNSRDLTDLTDLRSLLTEAVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAEQVLEAVPYQVEAADVLTSLAGRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIKKR Sbjct: 1 MLKWSLWIVWLPFLVLSRPTFLHSFSKANYMWSSLLPFSKSRAMPLLCASTQQNSRDLTDLTDLRSLLTEAVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAEQVLEAVPYQVEAADVLTSLAGRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIKKR 396
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|976913499|gb|KVH99753.1| (4Fe-4S ferredoxin-type, iron-sulpur binding domain-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 155.221 bits (391), Expect = 3.878e-40 Identity = 114/334 (34.13%), Postives = 161/334 (48.20%), Query Frame = 0 Query: 79 PKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAEQVLEAVPYQVEAADVLTSLAGRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPP-------------RPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIM-----SQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 P+ +L +G WVKLICGAS++D+ V+ L YTLAGVDCID +A AVV A EG+ AA + V V + L D + + S C +I P A+S F +FL + RC+G R F L +GDS R L++WQ DGRPMSGDIGRG T ++ FA + + P FLQLAGGTNA+T + L + L A+V S++++ + +A + G+A+GG+AR V R++ S+ G+G IE+ PD LL + A G+V +K Sbjct: 47 PQKSLQKGNWVKLICGASFEDVVDVRNLSLVYTLAGVDCIDCAADLAVVNAVNEGIDAARTILPIRRPWVMISVNDDEDLHFRKAEFDPDDCPNDCSRP----------CEKICPA----NAISFQDAFSSYKVLTSFLLQPGVITERCYGCG--RCFPVSLPYIGDSTVSMMNKMYSILEQDLRCLNLWQLDGRPMSGDIGRGATRESIAFALRLASTNNRPPG---------FLQLAGGTNAHTVDGLRKQNLFQTATV----SESSRVSNSNALISGIAYGGYARKIVGRVLQSDSDSEGGVGE----IESYPDHLLMAVIEALGLVGGVK 347
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|1175834322|ref|XP_020570723.1| (uncharacterized protein LOC110017905 isoform X4 [Phalaenopsis equestris]) HSP 1 Score: 154.066 bits (388), Expect = 1.426e-39 Identity = 117/384 (30.47%), Postives = 172/384 (44.79%), Query Frame = 0 Query: 38 FSKSRAMPLLCASTQQNSRDLTDLTDLRSLLTEAVELMSDD-----PKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLA--EQVLEAVPYQVEAADVLTSLAG------------------RIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPA--SVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 + S P S N R + L +++L+ V + + P +L G WVKLICGAS++D ++ L YTLAGVDCID +A ++VV A +G+ AAM + E+ + + D+ AG +DA+EIHT F +L + ++ V+VS P +G + + + R G ++WQ DGRPMSGDIGRG T A+ FA +R A+P + F QLAGGTN +T + L GL S G +D+ Q A + G+A+GG+AR V R++ + P LIE P+ L+ LR A +V P+K Sbjct: 5 MTSSNPPPRTIPSGGDNLRRIHRLDAIKALVNTTVNIHPRNVILPRPIDSLRRGEWVKLICGASFEDAADIRNLSLVYTLAGVDCIDCAADESVVNAVNDGINAAMNIGSIERPWVMISVNDDKEDLHFRKAGAKTYIRETAATSELLKRNDVDAIEIHTTGRHIHL----FNELWDTLGTSIKHVKLVAVSMPDIGNSTFSTMQDMHTIMESRLLG----------------------YNLWQLDGRPMSGDIGRGATREAINFA---MRLAAIP------DKPHGFYQLAGGTNLHTIDCLKKVGLFKAIKFSGTGGIADSAQ-----ALIGGIAYGGYARKIVARVLHKLPTQPGCMLIEDYPEYLMEALREALTLVGPVK 348
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|1091440434|ref|XP_018725590.1| (PREDICTED: uncharacterized protein LOC104448448 isoform X4 [Eucalyptus grandis]) HSP 1 Score: 151.369 bits (381), Expect = 1.145e-38 Identity = 125/367 (34.06%), Postives = 174/367 (47.41%), Query Frame = 0 Query: 38 FSKSRAMPLLCASTQQNSRDLTD--LTDLRSLLTE-AVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAE-------------QVLE----AVPYQVEAADVLTSLAGR--IDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVR-----GQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPD 377 FS + ++PL Q N R + L D+R+++ + + P +L G WVKLICGAS++D+ ++ L YTLAGVDCID +A ++VV A +G+ AA + E + L V V A + L R IDALEIHT+ R +E L I LR V+VSFP +G + T + +K+ ++ P R ++WQ DGRPMSGDIGRG T ++ FA + + P FLQLAGGTNA+T L GL SV GQS + A + G+A+GG+AR V RI+S + P + IE PD Sbjct: 6 FSCTASIPL---QPQVNFRPSSQKCLQDVRNMVKSLGIHSIRSSPVDSLRNGSWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADESVVNAVNQGIEAAREIVEVGRPWVMISVNDDEDLHFRKAGVHTYVRDAAATSELLRREDIDALEIHTSGRQILHFRSLWEGLGDSIHH----LRLVAVSFPDVGDS-TISTMKTMYSIM---------------------EPRLRCSNLWQLDGRPMSGDIGRGATKESIAFAVRLAAASDRPRG---------FLQLAGGTNAHTVAGLIKHGLFQTKSVSEENFKDGQSTVGSIRPLDAPIGGIAYGGYARKVVGRILS--AMQPGLTSIEESPD 332
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|659116968|ref|XP_008458354.1| (PREDICTED: uncharacterized protein LOC103497790 isoform X1 [Cucumis melo]) HSP 1 Score: 115.931 bits (289), Expect = 4.802e-25 Identity = 79/251 (31.47%), Postives = 120/251 (47.81%), Query Frame = 0 Query: 145 LEAVPYQVEAADVLTSLA-GRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 + V Y +AA + + G +DALEIHTN ++ F++L ++ + LR V+VS P +G T + +K+ ++ L++WQ DGRPMSGDIGRG T + FA + R+ P FLQLAGGTN +T + L E L S++ ++ +A + G+A+GG+AR V R++S + IE PD+LLA L A +V +K Sbjct: 200 INLVTYVRDAATTVKLIKRGDVDALEIHTNGRQTTY----FQELWDKLGDSSKYLRLVAVSLPNIGRDLTVSTMKTMFSIM---------------------ESQLHCLNLWQLDGRPMSGDIGRGATRETIAFAAQLARTNDRPPG---------FLQLAGGTNFHTVDGLKKERLFQSTSIIENSTNEELSSSLNALIGGIAYGGYARKIVGRVLSSMQTQNGDANIEDYPDSLLAALVEALTLVGTVK 416 HSP 2 Score: 69.707 bits (169), Expect = 2.341e-9 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0 Query: 60 DLTDLRSLLTE-AVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAA 137 +L ++RSL+ + + +L G WVKLICGAS++D+ ++ L YTLAGVDCID +A +VV+A EG+ AA Sbjct: 28 NLDNVRSLVNRIGIASVQSSSLQSLQNGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAA 106
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|1208501469|gb|OWM63625.1| (hypothetical protein CDL15_Pgr008168 [Punica granatum]) HSP 1 Score: 116.316 bits (290), Expect = 2.289e-24 Identity = 105/358 (29.33%), Postives = 156/358 (43.58%), Query Frame = 0 Query: 61 LTDLRSLLTE-AVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAAMLLAE--------QVLEAVPYQVEAADVLTSL-----------AGRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIM----SQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 L +++SL+ + ++ P +L G WVKLICGAS++D+ ++ L YTLAGVDCID +A ++VV A EG+ A + V + A V T + ++A+EIHT+ S + +E L +R L+ V+VS P +G + L S +A++ P + L++WQ DGRPMSGDIGRG T +V FA + + P SS E ++ L A + G+A+GG+AR V RI+ SQ GL S IE P+ LL + A G+V +K Sbjct: 27 LQEVKSLVKSLGIHSVTSSPVDSLRSGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADESVVGAVHEGIEVAREILPVRRPWVMISVNDDEDLHFRKAGVATYVRDAAATAELIHKNNVEAIEIHTSGRNISQFKSLWEGLEDSVR----HLKLVAVSLPDLGDST----LSSMDAMYSIM------------------EPRLQCLNLWQLDGRPMSGDIGRGATRESVAFAVRLAAIRDRPNESSNNEEPKYSLL-------------------------------------QALIGGVAYGGYARKIVGRILTSVQSQHGL----SRIEDYPEHLLEAIVQAIGLVGTVK 317
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|700192173|gb|KGN47377.1| (hypothetical protein Csa_6G307380 [Cucumis sativus]) HSP 1 Score: 110.538 bits (275), Expect = 5.769e-24 Identity = 81/252 (32.14%), Postives = 118/252 (46.83%), Query Frame = 0 Query: 145 LEAVPYQVEAADVLTSLA-GRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFA-QVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 + V Y +AA + + G +DALEIHTN ++ F++L ++ + LR V+VS P + T +K+ A+ L++WQ DGRPMSGDIGRG T + FA Q+ L + P FLQLAGGTN +T + L E L AS ++ + +A + G+A+GG+AR V R++S + IE PD LLA L A +V +K Sbjct: 83 INLVTYVRDAATTVKLIKRGDVDALEIHTNGRQTTY----FQELWDKLGDSSKYLRLVAVSLPNIDRDLTVTTMKTMFAIM---------------------ESQLHSLNLWQLDGRPMSGDIGRGATRETIAFAAQLALSNDRPPG----------FLQLAGGTNFHTVDGLKKERLFQSASTIKNSTIEELSSSSNALIGGIAYGGYARKIVGRVLSSMQTQNGDANIEDYPDYLLAALVEALTLVGTVK 299
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|778714597|ref|XP_011657263.1| (PREDICTED: uncharacterized protein LOC101215861 isoform X1 [Cucumis sativus]) HSP 1 Score: 110.923 bits (276), Expect = 2.395e-23 Identity = 81/252 (32.14%), Postives = 118/252 (46.83%), Query Frame = 0 Query: 145 LEAVPYQVEAADVLTSLA-GRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFA-QVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQEKDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 + V Y +AA + + G +DALEIHTN ++ F++L ++ + LR V+VS P + T +K+ A+ L++WQ DGRPMSGDIGRG T + FA Q+ L + P FLQLAGGTN +T + L E L AS ++ + +A + G+A+GG+AR V R++S + IE PD LLA L A +V +K Sbjct: 199 INLVTYVRDAATTVKLIKRGDVDALEIHTNGRQTTY----FQELWDKLGDSSKYLRLVAVSLPNIDRDLTVTTMKTMFAIM---------------------ESQLHSLNLWQLDGRPMSGDIGRGATRETIAFAAQLALSNDRPPG----------FLQLAGGTNFHTVDGLKKERLFQSASTIKNSTIEELSSSSNALIGGIAYGGYARKIVGRVLSSMQTQNGDANIEDYPDYLLAALVEALTLVGTVK 415 HSP 2 Score: 68.9366 bits (167), Expect = 3.596e-9 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0 Query: 85 EGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAA 137 G WVKLICGAS++D+ ++ L YTLAGVDCID +A +VV+A EG+ AA Sbjct: 53 NGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAA 105
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|703103619|ref|XP_010097776.1| (hypothetical protein L484_004190 [Morus notabilis] >gi|587882123|gb|EXB71055.1| hypothetical protein L484_004190 [Morus notabilis]) HSP 1 Score: 108.997 bits (271), Expect = 1.649e-22 Identity = 79/239 (33.05%), Postives = 118/239 (49.37%), Query Frame = 0 Query: 163 GRIDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVS---EDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSDATQE----KDRSAWVHGLAFGGFARMEVDRIMSQWGLGPEASLIEAPPDALLAVLRAAFGVVRPIK 394 G +DALEIHT+A +S PF++L ++ LR V+VS P +G + S N+++ P L++WQ DGRPMSGDIGRG T +++ FA+ + ++ P ++ + FLQLAGGTNA+T + L GL +S D + +A + G+A+GG+AR V R++S A IE P+ LL LR A +V +K Sbjct: 225 GDVDALEIHTSARQTS----PFKELWDGLQDSIRHLRLVAVSLPDIG----ETTITSMNSLYSIM------------------EPHLHCLNLWQLDGRPMSGDIGRGATKASISFARRLAATRERPNDKALSKSFLDISGFLQLAGGTNAHTVDGLRKVGLFQTSSSSENSRDEKLKVGSPSPMNASIAGVAYGGYARKIVGRVLSTMQSQQGAVRIEEHPEHLLQALREALALVGTVK 437 HSP 2 Score: 74.7146 bits (182), Expect = 6.124e-11 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0 Query: 55 SRDLTDLTDLRSLLTE-AVELMSDDPKSALSEGRWVKLICGASYQDLPRVKALCFAYTLAGVDCIDMSASQAVVTAAEEGVGAA 137 S T L ++R+L+ + + P +L +G WVKLICGAS++D+ ++ L YTLAGVDCID +A +VV+A EG+ AA Sbjct: 28 SNSTTALENVRNLVRAVGIPSVKSSPVESLQKGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIEAA 111
BLAST of EWM28645.1 vs. NCBI_GenBank
Match: gi|1147587300|ref|XP_020097476.1| (uncharacterized protein LOC109716437 isoform X5 [Ananas comosus]) HSP 1 Score: 105.916 bits (263), Expect = 1.744e-21 Identity = 88/292 (30.14%), Postives = 131/292 (44.86%), Query Frame = 0 Query: 93 CGASYQDLPRVKALCFAYTLA--GVDCIDMSASQAVVTAAEEGVGAAMLLAE-------------------QVLEAVPYQVEAADVLTSLAGR--IDALEIHTNASASSAGRDPFEDLCRRIRPQASGLRAVSVSFPFMGTAGTAAFLKSRNAVFGRCFGPDDERPFTGVLAGVGDSPPPRPLHIWQTDGRPMSGDIGRGTTLSAVKFAQVVLRSQALPWASSMVSEDEHFLQLAGGTNAYTAEKLADEGLLSPASVVRGQSD----ATQEKDRSAWVHGLAFGGFARMEVD 357 CG + PR+ + T A VDCID +A ++VV A EG+ A+ +A + AV Y V + + L R +DA+EIHT S G D F DL + ++ ++VS P +G + A NA+ + +S P R ++WQ DGRPMSGDIGRG T A+ FA + +Q P F Q+AGGTN++T + L GL + S+ A + + A + G+A+GG+AR ++D Sbjct: 124 CGGCEESFPRLHSRRRFETFAMISVDCIDCAADESVVNAVNEGINVALSIARVRRPWVMISVNDDREDLHFRKAGAVTY-VRDPSLTSHLLSRDDVDAIEIHT----SGRGTDLFSDLWSSLGDSLDHVKLIAVSLPDVGPSTVAVM----NAI-----------------CSIMESHPCR-YNLWQLDGRPMSGDIGRGATREAIAFAVRLASTQDKPHG---------FYQVAGGTNSHTIDCLKKVGLFQAVNFPERSSETSGAAKLDGSKQALIGGIAYGGYARKQID 379 The following BLAST results are available for this feature:
BLAST of EWM28645.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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