EWM28713.1, cds1980 (CDS) Nannochloropsis gaditana

Overview
NameEWM28713.1
Unique Namecds1980
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:624384..625484 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28713.1
ProductUbiquitin-associated/translation elongation factor EF1B
Orig transcript idgnl|cribi|Naga_100002g33.4832.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:624384..625484 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0005515protein binding
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0042221response to chemical
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR009060UBA-like
IPR015940UBA/transl_elong_EF1B_N_euk
IPR000626Ubiquitin-like
IPR007087Znf_C2H2
IPR003323OTU_dom
Homology
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|585111136|gb|EWM28713.1| (Ubiquitin-associated/translation elongation factor EF1B [Nannochloropsis gaditana])

HSP 1 Score: 759.214 bits (1959), Expect = 0.000e+0
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0
Query:    1 MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKSS 366
            MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKSS
Sbjct:    1 MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKSS 366          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|553194657|ref|XP_005856008.1| (ubiquitin thioesterase OTU1, partial [Nannochloropsis gaditana CCMP526] >gi|422293055|gb|EKU20356.1| ubiquitin thioesterase OTU1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 757.288 bits (1954), Expect = 0.000e+0
Identity = 365/366 (99.73%), Postives = 365/366 (99.73%), Query Frame = 0
Query:    1 MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKSS 366
            MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQ TSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKSS
Sbjct:    2 MPLTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQVTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYKSS 367          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|298712615|emb|CBJ33311.1| (OTU-like cysteine protease [Ectocarpus siliculosus])

HSP 1 Score: 288.886 bits (738), Expect = 1.683e-91
Identity = 166/409 (40.59%), Postives = 235/409 (57.46%), Query Frame = 0
Query:    1 MPLTLKVN-GPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVV----------------------------------KEDTQFTSGDKAPI-------PVTLPG-AQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGG----MTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGE 362
            MPL LK+  G G  SA L GL D  TL +L+  I E  G+   + +L+AGFPPKD++  D    + SLGI +GSA+TV+                                  +  T  ++   AP        P   P   Q ++DMGF    A KALEV+ G++  A+++C++G              P  + S  G      TA R+MVRR+IDADNSCLFNAVGY + + R++G +LR++I + VR SP+VY E +LGK P++Y +WI DP  WGGEIEL ILS+     +  ++I++ +AY YGE   + RR++++YDG+HYDALA AA + TAPES D+T F   ++  +  A  VAA+LK   Q+ D+   +L+CMVC K L+G++ AL HAR T HQNFG+
Sbjct:    1 MPLNLKITWGAGASSARLLGLDDGITLSELKGVIAEKSGIETHRAQLKAGFPPKDVSGSDADP-VVSLGITSGSALTVLERKAPPSPTPTPTQPSPSPPPPSSVPSPPSSAAARRTTSVSAAPPAPPQLQRRQEPAVDPALVQSLVDMGFEQGFAAKALEVAGGDINTAVEICMSG-------------DPAALGSDSGRAASTATAARIMVRRIIDADNSCLFNAVGYALRRKRKVGTELRQMITEAVRGSPEVYNEGILGKQPEEYCNWISDPKSWGGEIELSILSKKLVVMITVVDIQTNNAYSYGEEHGFGRRLFIIYDGIHYDALAEAA-NETAPESDDVTVFNPSEKEKEILAKTVAADLKARNQYTDMGNASLKCMVCFKLLAGEKGALEHARATGHQNFGQ 394          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|552811097|ref|XP_005843374.1| (hypothetical protein CHLNCDRAFT_28255 [Chlorella variabilis] >gi|307103007|gb|EFN51272.1| hypothetical protein CHLNCDRAFT_28255 [Chlorella variabilis])

HSP 1 Score: 218.779 bits (556), Expect = 1.925e-65
Identity = 107/228 (46.93%), Postives = 145/228 (63.60%), Query Frame = 0
Query:  144 PTAPPVPVTSHGGMTTA-----NRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSK---QAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEY 363
            P AP    ++  G  TA        +VRR+ID+DNSCLFNAVGY  E++R++ P+LR++IAD V   P  + EAVLGK P +Y  WI+DP +WGG IEL ILS++ G E+ A +I++    +YG+G  YS R+ L+YDG+HYDALA+AA    APE LD+T  P     ++   Q A  +A + +  R F D    TLRC VC  GL G++EA+ HA+ T H NF EY
Sbjct:   70 PAAPSTASSAQQGAPTAVALADGTAVVRRIIDSDNSCLFNAVGYVTERSRKLAPRLRQVIADAVLADPFEWNEAVLGKEPAEYCRWIKDPNKWGGAIELSILSRHLGREIAAFDIQTTRVDIYGQGSGYSERVMLIYDGLHYDALAVAAFE-GAPEQLDVTVIPTSGTRTEMVMQGAKQLATKAQTARAFTDTANFTLRCGVCQIGLKGEKEAVEHAKTTGHTNFSEY 296          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|290982849|ref|XP_002674142.1| (predicted protein [Naegleria gruberi] >gi|284087730|gb|EFC41398.1| predicted protein [Naegleria gruberi])

HSP 1 Score: 219.935 bits (559), Expect = 2.123e-65
Identity = 126/370 (34.05%), Postives = 203/370 (54.86%), Query Frame = 0
Query:    5 LKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAE-----LTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCME----KNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSR-RIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYK 364
            +++  P  + A L+G+  S+T+  L+ +I++   +  ++QKL+ GFPP+++  Q   +E     L+ +G+++G ++ +V+E +++ S               I++    + V            ++ +      II  ES   VP  P   V +      A  V+++RVID+DNSCLFNA  YC+E    + ++  P LR++I D + N P  + EA+LG++PK Y +WI     WGG +E+ ILSQ+Y   V + ++ S    VYGEG    + +I LLYDG+HYDALA+    P  PE LD+T  PA D+ S   AL +  +L    QF D    TL+C+ C + + G++EA LHA++T H  FGE K
Sbjct:    2 IRIRLPASQMA-LRGVDFSSTVDWLKQQIQKESKIEPSKQKLKMGFPPQEIAGQQNQSEFNAKKLSDIGVKSGESL-IVEETSEYAS---------------IVNNSQPIVVE-----------DDDITPSSYKIIKPESYSDVPPRPH-SVGTDDSTLIAESVVIKRVIDSDNSCLFNAFAYCLEGCESRKKKRAPALRRVIRDWILNDPIQFNEAILGQSPKAYCEWIMKDNSWGGSLEIMILSQFYNIRVDSFDVTSNRRDVYGEGDPLIKGKILLLYDGIHYDALAINP-VPQGPEELDITILPADDDISSTKALELVKQLHNQHQFTDTATFTLKCLQCGEFIKGEKEATLHAKKTGHSKFGERK 341          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|693498456|emb|CEF99052.1| (Ubiquitin interacting motif [Ostreococcus tauri])

HSP 1 Score: 214.157 bits (544), Expect = 3.549e-63
Identity = 126/361 (34.90%), Postives = 193/361 (53.46%), Query Frame = 0
Query:    3 LTLKVNGPGGKSAILKGLKDSATLQQLQIKIEELLGVPMAQQKLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKEDTQFTSGDKAPIPVTLPGAQQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEY 363
            + L+V    G  A++  + D+AT+  L+  I     +  ++Q+   GFP + +   D +A   SLGI  G  I V +      +    P+  T+ G   +++            E++  + + AL   +   + D +     T+  V VTS           VRRVI +DNSCLFNAV YC+E++ +   +LR+++AD V      ++E  LGK+PK Y +WI  P  WGG++ELFILS+YY  E+ A +I++    +YGEG+ Y+ RI ++YDG+HYDAL +      A  S D+T+ P G   +  A   +  E    ++F D    +LRC+VC KGL GQ EA+ HA+ T H NFGEY
Sbjct:    1 MRLRVRTSDGAQAVVD-IADNATVGALKTAIARTTDIVESEQEWHFGFPARPVDATDFSASCASLGITNGETIAVSR--VTIENASTTPLGTTIEGDSTLVE------------ELAAMDEDEALARALAASMEDGANADASTS--VDVTSMHA--------VRRVIASDNSCLFNAVAYCVERSLKEATRLRRVVADAVAADAATFSEGFLGKSPKAYVEWITKPNSWGGQVELFILSKYYRVEIAAYDIQTERCDIYGEGEGYNDRIMVIYDGLHYDALVLHPVFGGADVSRDVTRVPPG--VALPAVQRLVREQHASKKFTDTANFSLRCLVCQKGLVGQAEAVAHAKSTGHANFGEY 334          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|695024048|ref|XP_009399222.1| (PREDICTED: ubiquitin thioesterase OTU1 [Musa acuminata subsp. malaccensis] >gi|695024050|ref|XP_009399223.1| PREDICTED: ubiquitin thioesterase OTU1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 203.756 bits (517), Expect = 8.003e-61
Identity = 103/210 (49.05%), Postives = 135/210 (64.29%), Query Frame = 0
Query:  161 NRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPT--APESLDMTQFPAGDESS----KQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYK 364
            + ++VRRVI +DNSCLFNAVGY ME ++   P LR++IA  V + P  YTEA LGK   +Y  WIQDP +WGG IEL ILS+YYG E+ A +I+S    +YG+GK+Y  R+ L+YDG+HYDALAM   SP   APE  D T F    + S    +  +L +  +    R + D    TLRC VC  GL+GQ+EA+ HA+ T H NF EY+
Sbjct:    2 DEIVVRRVIPSDNSCLFNAVGYVMEHDKTKAPYLRQVIAAVVASDPGKYTEAFLGKPNNEYCAWIQDPDKWGGAIELSILSEYYGREIAAYDIQSTRCDLYGQGKSYQERVMLIYDGLHYDALAM---SPFEGAPEEFDQTVFSIRSDRSIGPVENLSLNLVKDAHRKRSYTDTANFTLRCGVCQVGLTGQKEAIAHAQATGHVNFQEYR 208          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|1134893007|gb|OMJ90255.1| (hypothetical protein SteCoe_7463 [Stentor coeruleus])

HSP 1 Score: 205.682 bits (522), Expect = 1.786e-60
Identity = 108/279 (38.71%), Postives = 167/279 (59.86%), Query Frame = 0
Query:   91 PIPVTLPGAQQIIDMGFSVAVALKALEVSH----GEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCME-KNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYK 364
            P+  T+   +Q I    S+  A + L   +        N+  L  +GII+ E++     + P+         +++  +VRR+I ADNSCLFN++ Y +E +N++ G  LR +I+  + + PD Y + +LGK+ ++Y  WI+  + WGG IEL ILS+YY   + A+ I++AH  ++G+   Y + IY++YDG+HYD LA  +G   APES D+T F AGD  + Q AL++A ELK   Q+ D+   TLRC +C  GL G+  A+ HA++T HQNF EYK
Sbjct:   20 PLTTTMSALRQEISTKTSIKPAYQELRKGYPPTVFTCPNSSLLIDSGIISGETITIEKLSNPIL----SQQDSSSLKLVRRIIAADNSCLFNSIAYALETRNKKSGTFLRNVISAYIESDPDTYNKTLLGKSNQEYVSWIEQESSWGGGIELSILSKYYQIMIGAVSIQTAHVDIFGQEDGYMKIIYVIYDGIHYDVLAKTSGDD-APESEDVTIFDAGDIETYQQALSIANELKIAHQYTDVGNFTLRCGICYIGLVGERGAIQHAQDTGHQNFVEYK 293          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|1026010150|ref|XP_016556785.1| (PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010152|ref|XP_016556786.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010154|ref|XP_016556787.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010156|ref|XP_016556788.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010158|ref|XP_016556789.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010160|ref|XP_016556790.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010162|ref|XP_016556791.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum] >gi|1026010164|ref|XP_016556792.1| PREDICTED: ubiquitin thioesterase OTU1 [Capsicum annuum])

HSP 1 Score: 202.216 bits (513), Expect = 3.086e-60
Identity = 100/205 (48.78%), Postives = 134/205 (65.37%), Query Frame = 0
Query:  164 MVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESS----KQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYK 364
            +VRRVI +DNSCLFNAVGY M+ N+   P+LR++IA  V   P  Y++A LGK  K+Y DWI +P +WGG IEL IL+ YYG E+ A +I++    +YG+GKNY  R+ L+YDG+HYDALAM+  +  APE  D T F    + +    ++ AL +  E +  R F D    TLRC VC  G+ GQ+EA+ HA+ T H NF EYK
Sbjct:    5 IVRRVIPSDNSCLFNAVGYVMDHNKNKAPELRQVIAATVAGDPTKYSDAFLGKPNKEYCDWILNPDKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQGKNYQERVMLIYDGLHYDALAMSP-AEGAPEEFDQTIFTVQRDGTVGPAERLALNLVMEQQRKRSFTDTANFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYK 208          
BLAST of EWM28713.1 vs. NCBI_GenBank
Match: gi|1025355121|ref|XP_016511246.1| (PREDICTED: ubiquitin thioesterase OTU1-like [Nicotiana tabacum])

HSP 1 Score: 201.83 bits (512), Expect = 4.454e-60
Identity = 98/205 (47.80%), Postives = 136/205 (66.34%), Query Frame = 0
Query:  164 MVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQFPAGDESS----KQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGEYK 364
            +VRRVI +DNSCLFNAVGY M+ +R   P+LR++IA  V + P  Y++A LGK+ K+Y DWI +P +WGG IEL IL+ YYG E+ A +I++    +YG+GKNY  R+ L+YDG+HYDALAM+  +  APE  D T F    + +    ++ AL +  E +  R + D    TLRC VC  G+ GQ+EA+ HA+ T H NF E+K
Sbjct:    5 IVRRVIPSDNSCLFNAVGYVMDHDRNKAPELRQVIAATVASDPTKYSDAFLGKSNKEYCDWILNPEKWGGAIELSILTDYYGREIAAYDIQTTRCDLYGQGKNYQERVMLIYDGLHYDALAMSP-AEGAPEEFDQTIFTVQRDGTVGPAERLALNLVKEQQRKRSYTDTANFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEFK 208          
The following BLAST results are available for this feature:
BLAST of EWM28713.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111136|gb|EWM28713.1|0.000e+0100.00Ubiquitin-associated/translation elongation factor... [more]
gi|553194657|ref|XP_005856008.1|0.000e+099.73ubiquitin thioesterase OTU1, partial [Nannochlorop... [more]
gi|298712615|emb|CBJ33311.1|1.683e-9140.59OTU-like cysteine protease [Ectocarpus siliculosus... [more]
gi|552811097|ref|XP_005843374.1|1.925e-6546.93hypothetical protein CHLNCDRAFT_28255 [Chlorella v... [more]
gi|290982849|ref|XP_002674142.1|2.123e-6534.05predicted protein [Naegleria gruberi] >gi|28408773... [more]
gi|693498456|emb|CEF99052.1|3.549e-6334.90Ubiquitin interacting motif [Ostreococcus tauri][more]
gi|695024048|ref|XP_009399222.1|8.003e-6149.05PREDICTED: ubiquitin thioesterase OTU1 [Musa acumi... [more]
gi|1134893007|gb|OMJ90255.1|1.786e-6038.71hypothetical protein SteCoe_7463 [Stentor coeruleu... [more]
gi|1026010150|ref|XP_016556785.1|3.086e-6048.78PREDICTED: ubiquitin thioesterase OTU1 [Capsicum a... [more]
gi|1025355121|ref|XP_016511246.1|4.454e-6047.80PREDICTED: ubiquitin thioesterase OTU1-like [Nicot... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1985rna1985Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications